RNA–Protein interactions for RNA: ENST00000495619.1

NCKAP1-208, Transcript of NCK associated protein 1, humanhuman

TSL 3

Gene NCKAP1, Length 665 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-208ENST00000495619 CFAP43Q8NDM7 1665 aa1.78□□□□□ -2.12
NCKAP1-208ENST00000495619 MYMXA0A1B0GTQ4 84 aa1.78□□□□□ -2.12
NCKAP1-208ENST00000495619 TMEM30CPA0ZSE6 113 aa1.78□□□□□ -2.12
NCKAP1-208ENST00000495619 FAM223BA6NKX1 122 aa1.78□□□□□ -2.12
NCKAP1-208ENST00000495619 CEBPZOSA8MTT3 80 aa1.78□□□□□ -2.12
NCKAP1-208ENST00000495619 TMEM14DPA8MWL7 114 aa1.78□□□□□ -2.12
NCKAP1-208ENST00000495619 ODF3BA8MYP8 253 aa1.78□□□□□ -2.12
NCKAP1-208ENST00000495619 H3BVH4 76 aa1.78□□□□□ -2.12
NCKAP1-208ENST00000495619 PLGLAQ15195 96 aa1.78□□□□□ -2.12
NCKAP1-208ENST00000495619 FAM103A1Q9BTL3 118 aaKnown RBP1.78□□□□□ -2.12
NCKAP1-208ENST00000495619 GNG13Q9P2W3 67 aa1.78□□□□□ -2.12
NCKAP1-208ENST00000495619 MALRD1Q5VYJ5 2156 aa1.78□□□□□ -2.13
NCKAP1-208ENST00000495619 MUC22E2RYF6 1773 aaPredicted RBP1.77□□□□□ -2.13
NCKAP1-208ENST00000495619 SIPA1L3O60292 1781 aaPredicted RBP1.77□□□□□ -2.13
NCKAP1-208ENST00000495619 DIDO1Q9BTC0 2240 aaKnown RBP1.77□□□□□ -2.13
NCKAP1-208ENST00000495619 TRAV12-1A0A0B4J245 112 aa1.77□□□□□ -2.13
NCKAP1-208ENST00000495619 A0A0J9YX75 114 aa1.77□□□□□ -2.13
NCKAP1-208ENST00000495619 ARL14EPLP0DKL9 152 aa1.77□□□□□ -2.13
NCKAP1-208ENST00000495619 DEFB103AP81534 67 aa1.77□□□□□ -2.13
NCKAP1-208ENST00000495619 ERHP84090 104 aaKnown RBP1.77□□□□□ -2.13
NCKAP1-208ENST00000495619 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.77□□□□□ -2.13
NCKAP1-208ENST00000495619 NDUFA11Q86Y39 141 aa1.77□□□□□ -2.13
NCKAP1-208ENST00000495619 PSENENQ9NZ42 101 aa1.77□□□□□ -2.13
NCKAP1-208ENST00000495619 LAMB1P07942 1786 aa1.77□□□□□ -2.13
NCKAP1-208ENST00000495619 TOP2BQ02880 1626 aa1.77□□□□□ -2.13
NCKAP1-208ENST00000495619 UGGT1Q9NYU2 1555 aa1.76□□□□□ -2.13
NCKAP1-208ENST00000495619 HMGXB3Q12766 1538 aa1.76□□□□□ -2.13
NCKAP1-208ENST00000495619 RALGAPBQ86X10 1494 aa1.76□□□□□ -2.13
NCKAP1-208ENST00000495619 SLX4Q8IY92 1834 aa1.76□□□□□ -2.13
NCKAP1-208ENST00000495619 TMSB15BA0A087X1C1 80 aa1.76□□□□□ -2.13
NCKAP1-208ENST00000495619 SPINT3P49223 89 aa1.76□□□□□ -2.13
NCKAP1-208ENST00000495619 UBE2D1P51668 147 aa1.76□□□□□ -2.13
NCKAP1-208ENST00000495619 ZNF833PQ6ZTB9 187 aa1.76□□□□□ -2.13
NCKAP1-208ENST00000495619 PROK2Q9HC23 129 aa1.76□□□□□ -2.13
NCKAP1-208ENST00000495619 TMEM14BQ9NUH8 114 aa1.76□□□□□ -2.13
NCKAP1-208ENST00000495619 COL4A2P08572 1712 aa1.76□□□□□ -2.13
NCKAP1-208ENST00000495619 COL4A6Q14031 1691 aa1.76□□□□□ -2.13
NCKAP1-208ENST00000495619 PREX1Q8TCU6 1659 aa1.76□□□□□ -2.13
NCKAP1-208ENST00000495619 KDM6BO15054 1643 aa1.76□□□□□ -2.13
NCKAP1-208ENST00000495619 PDCD11Q14690 1871 aaKnown RBP1.75□□□□□ -2.13
NCKAP1-208ENST00000495619 AFDNP55196 1824 aaKnown RBP1.75□□□□□ -2.13
NCKAP1-208ENST00000495619 MROH2AA6NES4 1674 aa1.75□□□□□ -2.13
NCKAP1-208ENST00000495619 MYOM1P52179 1685 aa1.75□□□□□ -2.13
NCKAP1-208ENST00000495619 IGLV3-32A0A0A0MS00 114 aa1.75□□□□□ -2.13
NCKAP1-208ENST00000495619 TRBV10-1A0A0K0K1A3 114 aa1.75□□□□□ -2.13
NCKAP1-208ENST00000495619 IFI27P40305 119 aaPredicted RBP1.75□□□□□ -2.13
NCKAP1-208ENST00000495619 Q6JHZ5 121 aa1.75□□□□□ -2.13
NCKAP1-208ENST00000495619 CSAG1Q6PB30 78 aa1.75□□□□□ -2.13
NCKAP1-208ENST00000495619 CDC42SE2Q9NRR3 84 aa1.75□□□□□ -2.13
NCKAP1-208ENST00000495619 LHFPL6Q9Y693 200 aa1.75□□□□□ -2.13
NCKAP1-208ENST00000495619 MED13Q9UHV7 2174 aa1.75□□□□□ -2.13
NCKAP1-208ENST00000495619 KIAA1549LQ6ZVL6 1849 aa1.75□□□□□ -2.13
NCKAP1-208ENST00000495619 DOCK11Q5JSL3 2073 aa1.75□□□□□ -2.13
NCKAP1-208ENST00000495619 CRYBG1Q9Y4K1 1723 aa1.74□□□□□ -2.13
NCKAP1-208ENST00000495619 DLG5Q8TDM6 1919 aa1.74□□□□□ -2.13
NCKAP1-208ENST00000495619 TRBV6-8A0A0A6YYG3 113 aa1.74□□□□□ -2.13
NCKAP1-208ENST00000495619 HMGN4O00479 90 aa1.74□□□□□ -2.13
NCKAP1-208ENST00000495619 LEPROTL1O95214 131 aa1.74□□□□□ -2.13
NCKAP1-208ENST00000495619 ATP5EP2Q5VTU8 51 aa1.74□□□□□ -2.13
NCKAP1-208ENST00000495619 KRTAP26-1Q6PEX3 210 aa1.74□□□□□ -2.13
NCKAP1-208ENST00000495619 NDUFA4L2Q9NRX3 87 aa1.74□□□□□ -2.13
NCKAP1-208ENST00000495619 SLIT2O94813 1529 aa1.74□□□□□ -2.13
NCKAP1-208ENST00000495619 ABCC6O95255 1503 aa1.74□□□□□ -2.13
NCKAP1-208ENST00000495619 NINQ8N4C6 2090 aa1.74□□□□□ -2.13
NCKAP1-208ENST00000495619 IFT172Q9UG01 1749 aa1.74□□□□□ -2.13
NCKAP1-208ENST00000495619 KIAA0556O60303 1618 aa1.73□□□□□ -2.13
NCKAP1-208ENST00000495619 FREM3P0C091 2139 aa1.73□□□□□ -2.13
NCKAP1-208ENST00000495619 CPAMD8Q8IZJ3 1885 aa1.73□□□□□ -2.13
NCKAP1-208ENST00000495619 TRBV6-7A0A0A0MS04 114 aa1.73□□□□□ -2.13
NCKAP1-208ENST00000495619 TRGV4A0A0C4DH28 118 aa1.73□□□□□ -2.13
NCKAP1-208ENST00000495619 LOC101927531A0A1B0GV80 90 aa1.73□□□□□ -2.13
NCKAP1-208ENST00000495619 C2orf70A6NJV1 201 aa1.73□□□□□ -2.13
NCKAP1-208ENST00000495619 HIGD1CA8MV81 97 aa1.73□□□□□ -2.13
NCKAP1-208ENST00000495619 C10orf142B7Z368 130 aa1.73□□□□□ -2.13
NCKAP1-208ENST00000495619 D6R8Y8 96 aa1.73□□□□□ -2.13
NCKAP1-208ENST00000495619 IGHV3-33P01772 117 aa1.73□□□□□ -2.13
NCKAP1-208ENST00000495619 SAA2P0DJI9 122 aaPredicted RBP1.73□□□□□ -2.13
NCKAP1-208ENST00000495619 ELOF1P60002 83 aaKnown RBP1.73□□□□□ -2.13
NCKAP1-208ENST00000495619 ATXN8Q156A1 80 aa1.73□□□□□ -2.13
NCKAP1-208ENST00000495619 MUSTN1Q8IVN3 82 aa1.73□□□□□ -2.13
NCKAP1-208ENST00000495619 DEFB107AQ8IZN7 70 aa1.73□□□□□ -2.13
NCKAP1-208ENST00000495619 TOMM5Q8N4H5 51 aa1.73□□□□□ -2.13
NCKAP1-208ENST00000495619 C9orf163Q8N9P6 203 aa1.73□□□□□ -2.13
NCKAP1-208ENST00000495619 DMAC1Q96GE9 116 aa1.73□□□□□ -2.13
NCKAP1-208ENST00000495619 MRPL36Q9P0J6 103 aaKnown RBP1.73□□□□□ -2.13
NCKAP1-208ENST00000495619 UBE2D4Q9Y2X8 147 aa1.73□□□□□ -2.13
NCKAP1-208ENST00000495619 CDC42BPGQ6DT37 1551 aa1.72□□□□□ -2.13
NCKAP1-208ENST00000495619 FBN3Q75N90 2809 aa1.72□□□□□ -2.13
NCKAP1-208ENST00000495619 ZNF142P52746 1687 aaPredicted RBP1.72□□□□□ -2.13
NCKAP1-208ENST00000495619 ALS2Q96Q42 1657 aa1.72□□□□□ -2.13
NCKAP1-208ENST00000495619 PPP1R17O96001 155 aa1.72□□□□□ -2.13
NCKAP1-208ENST00000495619 ARMS2P0C7Q2 107 aa1.72□□□□□ -2.13
NCKAP1-208ENST00000495619 PCOTHQ58A44 107 aa1.72□□□□□ -2.13
NCKAP1-208ENST00000495619 C1orf137Q5JT78 98 aa1.72□□□□□ -2.13
NCKAP1-208ENST00000495619 ORMDL1Q9P0S3 153 aa1.72□□□□□ -2.13
NCKAP1-208ENST00000495619 CCL26Q9Y258 94 aa1.72□□□□□ -2.13
NCKAP1-208ENST00000495619 LENEPQ9Y5L5 61 aa1.72□□□□□ -2.13
NCKAP1-208ENST00000495619 HELZ2Q9BYK8 2649 aaKnown RBP1.72□□□□□ -2.13
NCKAP1-208ENST00000495619 LAMA4Q16363 1823 aa1.72□□□□□ -2.13
NCKAP1-208ENST00000495619 LAMB2P55268 1798 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms