RNA–Protein interactions for RNA: ENST00000495554.1

CHTOP-206, Transcript of chromatin target of PRMT1, humanhuman

TSL 2

Gene CHTOP, Length 2,553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-206ENST00000495554 IGHV3-53P01767 116 aa10.72□□□□□ -0.69
CHTOP-206ENST00000495554 TSPEAR-AS2P59090 65 aa10.72□□□□□ -0.69
CHTOP-206ENST00000495554 HILS1P60008 231 aa10.72□□□□□ -0.69
CHTOP-206ENST00000495554 WFDC2Q14508 124 aa10.72□□□□□ -0.69
CHTOP-206ENST00000495554 TMEM101Q96IK0 257 aa10.72□□□□□ -0.69
CHTOP-206ENST00000495554 TMEM223A0PJW6 202 aa10.71□□□□□ -0.69
CHTOP-206ENST00000495554 INSL3P51460 131 aa10.71□□□□□ -0.69
CHTOP-206ENST00000495554 NOTCH2Q04721 2471 aa10.71□□□□□ -0.7
CHTOP-206ENST00000495554 HIVEP2P31629 2446 aa10.71□□□□□ -0.7
CHTOP-206ENST00000495554 LGALS3P17931 250 aaKnown RBP10.71□□□□□ -0.7
CHTOP-206ENST00000495554 RRN3P1Q2M238 152 aa10.71□□□□□ -0.7
CHTOP-206ENST00000495554 J3KT08 172 aa10.7□□□□□ -0.7
CHTOP-206ENST00000495554 Q9UF83 564 aa10.7□□□□□ -0.7
CHTOP-206ENST00000495554 LEPROTO15243 131 aa10.7□□□□□ -0.7
CHTOP-206ENST00000495554 ZNF22P17026 224 aaPredicted RBP10.7□□□□□ -0.7
CHTOP-206ENST00000495554 ETDBQ3ZM63 59 aa10.7□□□□□ -0.7
CHTOP-206ENST00000495554 SH2D6Q7Z4S9 175 aa10.7□□□□□ -0.7
CHTOP-206ENST00000495554 AMELXQ99217 191 aa10.7□□□□□ -0.7
CHTOP-206ENST00000495554 A0A0J9YXV3 536 aa10.69□□□□□ -0.7
CHTOP-206ENST00000495554 C9JAW5 83 aa10.69□□□□□ -0.7
CHTOP-206ENST00000495554 SLC25A29Q8N8R3 303 aa10.69□□□□□ -0.7
CHTOP-206ENST00000495554 SETXQ7Z333 2677 aaKnown RBP10.69□□□□□ -0.7
CHTOP-206ENST00000495554 C1orf158Q8N1D5 194 aa10.69□□□□□ -0.7
CHTOP-206ENST00000495554 ADARB2-AS1A8MUL3 147 aa10.68□□□□□ -0.7
CHTOP-206ENST00000495554 UBE2D1P51668 147 aa10.68□□□□□ -0.7
CHTOP-206ENST00000495554 FAM104AQ969W3 186 aa10.68□□□□□ -0.7
CHTOP-206ENST00000495554 CHCHD7Q9BUK0 85 aa10.68□□□□□ -0.7
CHTOP-206ENST00000495554 NACAE9PAV3 2078 aa10.68□□□□□ -0.7
CHTOP-206ENST00000495554 TRBV20-1A0A075B6N2 111 aa10.68□□□□□ -0.7
CHTOP-206ENST00000495554 TINCRA0A1B0GVN0 87 aa10.68□□□□□ -0.7
CHTOP-206ENST00000495554 CMC4P56277 68 aaPredicted RBP10.68□□□□□ -0.7
CHTOP-206ENST00000495554 V9GYY9 64 aa10.68□□□□□ -0.7
CHTOP-206ENST00000495554 OTOGQ6ZRI0 2925 aa10.68□□□□□ -0.7
CHTOP-206ENST00000495554 IGHV3OR16-12A0A075B7B8 117 aa10.67□□□□□ -0.7
CHTOP-206ENST00000495554 MRPS36P82909 103 aaKnown RBP10.67□□□□□ -0.7
CHTOP-206ENST00000495554 LY6G6DO95868 133 aa10.67□□□□□ -0.7
CHTOP-206ENST00000495554 IL17DQ8TAD2 202 aa10.67□□□□□ -0.7
CHTOP-206ENST00000495554 CEMP1Q6PRD7 247 aaPredicted RBP10.66□□□□□ -0.7
CHTOP-206ENST00000495554 UBE2D4Q9Y2X8 147 aa10.66□□□□□ -0.7
CHTOP-206ENST00000495554 A0A1B0GX51 115 aa10.66□□□□□ -0.7
CHTOP-206ENST00000495554 NDUFA7O95182 113 aa10.66□□□□□ -0.7
CHTOP-206ENST00000495554 IGHV3-30P01768 117 aa10.66□□□□□ -0.7
CHTOP-206ENST00000495554 IGHV3-30-5P0DP03 117 aa10.66□□□□□ -0.7
CHTOP-206ENST00000495554 A0A0U1RRA0 63 aa10.65□□□□□ -0.7
CHTOP-206ENST00000495554 TIRAPP58753 221 aa10.65□□□□□ -0.7
CHTOP-206ENST00000495554 TRGV1A0A0A0MS02 117 aa10.64□□□□□ -0.71
CHTOP-206ENST00000495554 IGHV3-64A0A075B6Q5 118 aa10.64□□□□□ -0.71
CHTOP-206ENST00000495554 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.64□□□□□ -0.71
CHTOP-206ENST00000495554 IGHV3-38A0A0C4DH36 116 aa10.64□□□□□ -0.71
CHTOP-206ENST00000495554 IGKV2-29A2NJV5 120 aaPredicted RBP10.64□□□□□ -0.71
CHTOP-206ENST00000495554 IFITM1P13164 125 aa10.64□□□□□ -0.71
CHTOP-206ENST00000495554 KRTAP10-3P60369 221 aa10.64□□□□□ -0.71
CHTOP-206ENST00000495554 TMEM263Q8WUH6 116 aaKnown RBP10.64□□□□□ -0.71
CHTOP-206ENST00000495554 H3BMG7 143 aa10.63□□□□□ -0.71
CHTOP-206ENST00000495554 FOXI1Q12951 378 aa10.63□□□□□ -0.71
CHTOP-206ENST00000495554 NDUFA11Q86Y39 141 aa10.63□□□□□ -0.71
CHTOP-206ENST00000495554 TIMM21Q9BVV7 248 aa10.63□□□□□ -0.71
CHTOP-206ENST00000495554 JMJD1CQ15652 2540 aa10.62□□□□□ -0.71
CHTOP-206ENST00000495554 APOMO95445 188 aa10.62□□□□□ -0.71
CHTOP-206ENST00000495554 IGLV1-51P01701 117 aa10.62□□□□□ -0.71
CHTOP-206ENST00000495554 RNASE13Q5GAN3 156 aaKnown RBP10.62□□□□□ -0.71
CHTOP-206ENST00000495554 IGHV3-30-3P0DP02 117 aa10.62□□□□□ -0.71
CHTOP-206ENST00000495554 ZNF561-AS1K7EIQ3 104 aa10.61□□□□□ -0.71
CHTOP-206ENST00000495554 RPS28P62857 69 aaKnown RBP10.61□□□□□ -0.71
CHTOP-206ENST00000495554 TTC32Q5I0X7 151 aa10.61□□□□□ -0.71
CHTOP-206ENST00000495554 TRBV10-1A0A0K0K1A3 114 aa10.61□□□□□ -0.71
CHTOP-206ENST00000495554 GIG44P09565 113 aaPredicted RBP10.6□□□□□ -0.71
CHTOP-206ENST00000495554 CFC1BP0CG36 223 aa10.6□□□□□ -0.71
CHTOP-206ENST00000495554 CFC1P0CG37 223 aa10.6□□□□□ -0.71
CHTOP-206ENST00000495554 Q6ZTI0 123 aa10.6□□□□□ -0.71
CHTOP-206ENST00000495554 C10orf126Q8N4M7 172 aa10.6□□□□□ -0.71
CHTOP-206ENST00000495554 PRO0628Q9UI54 55 aa10.6□□□□□ -0.71
CHTOP-206ENST00000495554 TRAV4A0A0B4J268 109 aa10.6□□□□□ -0.71
CHTOP-206ENST00000495554 IGHV1-58A0A0C4DH39 117 aa10.6□□□□□ -0.71
CHTOP-206ENST00000495554 C19orf73Q9NVV2 129 aa10.6□□□□□ -0.71
CHTOP-206ENST00000495554 RPL36AP83881 106 aaKnown RBP10.59□□□□□ -0.71
CHTOP-206ENST00000495554 DAZ2Q13117 558 aaKnown RBP10.59□□□□□ -0.71
CHTOP-206ENST00000495554 GAGE13Q4V321 117 aa10.59□□□□□ -0.71
CHTOP-206ENST00000495554 RPL36ALQ969Q0 106 aaKnown RBP10.59□□□□□ -0.71
CHTOP-206ENST00000495554 K7EQD1 137 aa10.59□□□□□ -0.71
CHTOP-206ENST00000495554 GAGE2BQ13066 116 aa10.59□□□□□ -0.71
CHTOP-206ENST00000495554 GAGE2EQ4V326 116 aa10.59□□□□□ -0.71
CHTOP-206ENST00000495554 ATP6V0E2Q8NHE4 81 aa10.59□□□□□ -0.71
CHTOP-206ENST00000495554 GAGE2DQ9UEU5 116 aa10.59□□□□□ -0.71
CHTOP-206ENST00000495554 NOTCH3Q9UM47 2321 aa10.58□□□□□ -0.72
CHTOP-206ENST00000495554 A0A0J9YXY3 114 aa10.58□□□□□ -0.72
CHTOP-206ENST00000495554 MALP21145 153 aa10.58□□□□□ -0.72
CHTOP-206ENST00000495554 DGAT2L7PQ6IED9 249 aa10.58□□□□□ -0.72
CHTOP-206ENST00000495554 WFDC10AQ9H1F0 79 aa10.58□□□□□ -0.72
CHTOP-206ENST00000495554 TRAV8-3A0A0A6YYJ7 113 aa10.58□□□□□ -0.72
CHTOP-206ENST00000495554 RPL35AP18077 110 aaKnown RBP10.58□□□□□ -0.72
CHTOP-206ENST00000495554 UBE2D3P61077 147 aa10.58□□□□□ -0.72
CHTOP-206ENST00000495554 UBE2D2P62837 147 aa10.58□□□□□ -0.72
CHTOP-206ENST00000495554 LYRM7Q5U5X0 104 aa10.58□□□□□ -0.72
CHTOP-206ENST00000495554 DAZ4Q86SG3 579 aaKnown RBP10.58□□□□□ -0.72
CHTOP-206ENST00000495554 C3orf56Q8N813 242 aa10.58□□□□□ -0.72
CHTOP-206ENST00000495554 C16orf74Q96GX8 76 aa10.58□□□□□ -0.72
CHTOP-206ENST00000495554 VSIG2Q96IQ7 327 aa10.58□□□□□ -0.72
CHTOP-206ENST00000495554 NOP10Q9NPE3 64 aaKnown RBP10.58□□□□□ -0.72
CHTOP-206ENST00000495554 DAZ3Q9NR90 486 aaKnown RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms