RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 Q0VG73 95 aa7.68□□□□□ -1.18
UBA3-211ENST00000493957 RNASEKQ6P5S7 137 aaKnown RBP7.68□□□□□ -1.18
UBA3-211ENST00000493957 CLRN3Q8NCR9 226 aa7.68□□□□□ -1.18
UBA3-211ENST00000493957 RMI2Q96E14 147 aa7.68□□□□□ -1.18
UBA3-211ENST00000493957 C1orf43Q9BWL3 253 aa7.68□□□□□ -1.18
UBA3-211ENST00000493957 KRTAP9-3Q9BYQ3 159 aa7.68□□□□□ -1.18
UBA3-211ENST00000493957 HERC2O95714 4834 aa7.67□□□□□ -1.18
UBA3-211ENST00000493957 IGKV3OR2-268A0A0C4DH90 116 aa7.67□□□□□ -1.18
UBA3-211ENST00000493957 VCYO14598 125 aa7.67□□□□□ -1.18
UBA3-211ENST00000493957 HLA-DQA1P01909 254 aa7.67□□□□□ -1.18
UBA3-211ENST00000493957 KRTAP10-1P60331 282 aa7.67□□□□□ -1.18
UBA3-211ENST00000493957 MIAQ16674 131 aa7.67□□□□□ -1.18
UBA3-211ENST00000493957 KRTAP19-4Q3LI73 84 aa7.67□□□□□ -1.18
UBA3-211ENST00000493957 AMMECR1LQ6DCA0 310 aa7.67□□□□□ -1.18
UBA3-211ENST00000493957 TMEM136Q6ZRR5 245 aa7.67□□□□□ -1.18
UBA3-211ENST00000493957 PRELID3AQ96N28 172 aa7.67□□□□□ -1.18
UBA3-211ENST00000493957 IMMP2LQ96T52 175 aa7.67□□□□□ -1.18
UBA3-211ENST00000493957 SMIM2Q9BVW6 85 aa7.67□□□□□ -1.18
UBA3-211ENST00000493957 RYR1P21817 5038 aa7.66□□□□□ -1.18
UBA3-211ENST00000493957 APOBP04114 4563 aaKnown RBP7.66□□□□□ -1.18
UBA3-211ENST00000493957 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.66□□□□□ -1.18
UBA3-211ENST00000493957 PPP1R17O96001 155 aa7.66□□□□□ -1.18
UBA3-211ENST00000493957 FCER1GP30273 86 aa7.66□□□□□ -1.18
UBA3-211ENST00000493957 ORMDL3Q8N138 153 aa7.66□□□□□ -1.18
UBA3-211ENST00000493957 C20orf78Q9BR46 151 aa7.66□□□□□ -1.18
UBA3-211ENST00000493957 RPS10P5Q9NQ39 176 aa7.66□□□□□ -1.18
UBA3-211ENST00000493957 H7C423 109 aa7.65□□□□□ -1.18
UBA3-211ENST00000493957 TCAPO15273 167 aa7.65□□□□□ -1.18
UBA3-211ENST00000493957 APOC3P02656 99 aa7.65□□□□□ -1.18
UBA3-211ENST00000493957 PPBPP02775 128 aa7.65□□□□□ -1.18
UBA3-211ENST00000493957 RPL32P62910 135 aaKnown RBP7.65□□□□□ -1.18
UBA3-211ENST00000493957 RHEBQ15382 184 aa7.65□□□□□ -1.18
UBA3-211ENST00000493957 KIAA1644Q3SXP7 199 aa7.65□□□□□ -1.18
UBA3-211ENST00000493957 COX11Q9Y6N1 276 aa7.65□□□□□ -1.18
UBA3-211ENST00000493957 IGLV5-52A0A0A0MRZ9 124 aa7.64□□□□□ -1.19
UBA3-211ENST00000493957 USP17L23D6RBM5 183 aa7.64□□□□□ -1.19
UBA3-211ENST00000493957 PHOX2AO14813 284 aa7.64□□□□□ -1.19
UBA3-211ENST00000493957 RNASE13Q5GAN3 156 aaKnown RBP7.64□□□□□ -1.19
UBA3-211ENST00000493957 CDPF1Q6NVV7 123 aa7.64□□□□□ -1.19
UBA3-211ENST00000493957 SLC7A5P1Q8MH63 180 aa7.64□□□□□ -1.19
UBA3-211ENST00000493957 KIR2DL4Q99706 377 aa7.64□□□□□ -1.19
UBA3-211ENST00000493957 HSPG2P98160 4391 aa7.64□□□□□ -1.19
UBA3-211ENST00000493957 TRAV9-1A0A075B6T8 112 aa7.63□□□□□ -1.19
UBA3-211ENST00000493957 LOC389332A0A1B0GUA5 103 aa7.63□□□□□ -1.19
UBA3-211ENST00000493957 RPL39P62891 51 aaKnown RBP7.63□□□□□ -1.19
UBA3-211ENST00000493957 LINC01620Q4KN68 170 aa7.63□□□□□ -1.19
UBA3-211ENST00000493957 MRPL52Q86TS9 123 aaKnown RBP7.63□□□□□ -1.19
UBA3-211ENST00000493957 OR5A1Q8NGJ0 315 aa7.63□□□□□ -1.19
UBA3-211ENST00000493957 NTN5Q8WTR8 489 aaPredicted RBP7.63□□□□□ -1.19
UBA3-211ENST00000493957 UBE2D4Q9Y2X8 147 aa7.63□□□□□ -1.19
UBA3-211ENST00000493957 ZNF25P17030 456 aaPredicted RBP7.62□□□□□ -1.19
UBA3-211ENST00000493957 S100PP25815 95 aa7.62□□□□□ -1.19
UBA3-211ENST00000493957 Q6ZUT4 128 aa7.62□□□□□ -1.19
UBA3-211ENST00000493957 CDC42SE2Q9NRR3 84 aa7.62□□□□□ -1.19
UBA3-211ENST00000493957 TGIF2-C20orf24A0A0A6YYL0 155 aa7.61□□□□□ -1.19
UBA3-211ENST00000493957 TRAV8-4A0A0B4J246 113 aa7.61□□□□□ -1.19
UBA3-211ENST00000493957 GAGE12HA6NDE8 117 aa7.61□□□□□ -1.19
UBA3-211ENST00000493957 GCSHP23434 173 aa7.61□□□□□ -1.19
UBA3-211ENST00000493957 HAMPP81172 84 aa7.61□□□□□ -1.19
UBA3-211ENST00000493957 FAM104AQ969W3 186 aa7.61□□□□□ -1.19
UBA3-211ENST00000493957 TMEM101Q96IK0 257 aa7.61□□□□□ -1.19
UBA3-211ENST00000493957 OPRPNQ99935 248 aaPredicted RBP7.61□□□□□ -1.19
UBA3-211ENST00000493957 LINC00959A0A1B0GUT2 108 aa7.6□□□□□ -1.19
UBA3-211ENST00000493957 PRSS47A8MTI9 375 aa7.6□□□□□ -1.19
UBA3-211ENST00000493957 PRSS1P07477 247 aa7.6□□□□□ -1.19
UBA3-211ENST00000493957 SVBPQ8N300 66 aa7.6□□□□□ -1.19
UBA3-211ENST00000493957 ZNF664Q8N3J9 261 aa7.6□□□□□ -1.19
UBA3-211ENST00000493957 CHCHD10Q8WYQ3 142 aaPredicted RBP7.6□□□□□ -1.19
UBA3-211ENST00000493957 MAP1LC3AQ9H492 121 aa7.6□□□□□ -1.19
UBA3-211ENST00000493957 LAMTOR2Q9Y2Q5 125 aa7.6□□□□□ -1.19
UBA3-211ENST00000493957 CDK2AP2O75956 126 aa7.59□□□□□ -1.19
UBA3-211ENST00000493957 SNAPINO95295 136 aa7.59□□□□□ -1.19
UBA3-211ENST00000493957 NDUFA5Q16718 116 aa7.59□□□□□ -1.19
UBA3-211ENST00000493957 Q8N8P6 123 aa7.59□□□□□ -1.19
UBA3-211ENST00000493957 GNB1LQ9BYB4 327 aa7.59□□□□□ -1.19
UBA3-211ENST00000493957 FAM30AQ9NZY2 134 aa7.59□□□□□ -1.19
UBA3-211ENST00000493957 DNAH8Q96JB1 4490 aa7.58□□□□□ -1.2
UBA3-211ENST00000493957 CCL25O15444 150 aa7.58□□□□□ -1.2
UBA3-211ENST00000493957 IFI27P40305 119 aaPredicted RBP7.58□□□□□ -1.2
UBA3-211ENST00000493957 XCL1P47992 114 aa7.58□□□□□ -1.2
UBA3-211ENST00000493957 XGP55808 180 aa7.58□□□□□ -1.2
UBA3-211ENST00000493957 FOXI1Q12951 378 aa7.58□□□□□ -1.2
UBA3-211ENST00000493957 DGAT2L7PQ6IED9 249 aa7.58□□□□□ -1.2
UBA3-211ENST00000493957 C15orf56Q8N910 161 aa7.58□□□□□ -1.2
UBA3-211ENST00000493957 TIMM21Q9BVV7 248 aa7.58□□□□□ -1.2
UBA3-211ENST00000493957 CSDC2Q9Y534 153 aaKnown RBP7.58□□□□□ -1.2
UBA3-211ENST00000493957 RAB5AP20339 215 aa7.57□□□□□ -1.2
UBA3-211ENST00000493957 YPEL4Q96NS1 127 aa7.57□□□□□ -1.2
UBA3-211ENST00000493957 ALKBH7Q9BT30 221 aaPredicted RBP7.57□□□□□ -1.2
UBA3-211ENST00000493957 KRTAP9-8Q9BYQ0 159 aa7.57□□□□□ -1.2
UBA3-211ENST00000493957 FABP9Q0Z7S8 132 aa7.56□□□□□ -1.2
UBA3-211ENST00000493957 HIGD2BQ4VC39 106 aa7.56□□□□□ -1.2
UBA3-211ENST00000493957 C14orf177Q52M58 125 aa7.56□□□□□ -1.2
UBA3-211ENST00000493957 TMEM18Q96B42 140 aa7.56□□□□□ -1.2
UBA3-211ENST00000493957 SPANXA1Q9NS26 97 aa7.56□□□□□ -1.2
UBA3-211ENST00000493957 TRAV13-1A0A0B4J241 112 aa7.55□□□□□ -1.2
UBA3-211ENST00000493957 hDV102S1A0JD36 115 aa7.55□□□□□ -1.2
UBA3-211ENST00000493957 SLPIP03973 132 aa7.55□□□□□ -1.2
UBA3-211ENST00000493957 ZC2HC1BQ5TFG8 222 aa7.55□□□□□ -1.2
UBA3-211ENST00000493957 CBLN2Q8IUK8 224 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 173.2 ms