RNA–Protein interactions for RNA: ENST00000492386.5

SEMA4D-220, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,396 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-220ENST00000492386 TRAV25A0A0B4J276 109 aa11.58□□□□□ -0.56
SEMA4D-220ENST00000492386 XGP55808 180 aa11.58□□□□□ -0.56
SEMA4D-220ENST00000492386 LINC01620Q4KN68 170 aa11.58□□□□□ -0.56
SEMA4D-220ENST00000492386 TMEM86BQ8N661 226 aa11.58□□□□□ -0.56
SEMA4D-220ENST00000492386 IGHV3OR16-12A0A075B7B8 117 aa11.57□□□□□ -0.56
SEMA4D-220ENST00000492386 TIMM17BO60830 172 aa11.57□□□□□ -0.56
SEMA4D-220ENST00000492386 MT-ATP8P03928 68 aa11.57□□□□□ -0.56
SEMA4D-220ENST00000492386 NPC2P61916 151 aa11.57□□□□□ -0.56
SEMA4D-220ENST00000492386 COX6A2Q02221 97 aa11.57□□□□□ -0.56
SEMA4D-220ENST00000492386 STHQ8IWL8 128 aa11.57□□□□□ -0.56
SEMA4D-220ENST00000492386 TMEM101Q96IK0 257 aa11.57□□□□□ -0.56
SEMA4D-220ENST00000492386 ZNF843Q8N446 348 aa11.57□□□□□ -0.56
SEMA4D-220ENST00000492386 RNF183Q96D59 192 aa11.57□□□□□ -0.56
SEMA4D-220ENST00000492386 LINC01600Q96MT4 127 aa11.57□□□□□ -0.56
SEMA4D-220ENST00000492386 TRGV1A0A0A0MS02 117 aa11.56□□□□□ -0.56
SEMA4D-220ENST00000492386 DGAT2L7PQ6IED9 249 aa11.56□□□□□ -0.56
SEMA4D-220ENST00000492386 ICOSQ9Y6W8 199 aa11.56□□□□□ -0.56
SEMA4D-220ENST00000492386 NDUFA1O15239 70 aa11.56□□□□□ -0.56
SEMA4D-220ENST00000492386 APCP25054 2843 aa11.56□□□□□ -0.56
SEMA4D-220ENST00000492386 WNK1Q9H4A3 2382 aa11.56□□□□□ -0.56
SEMA4D-220ENST00000492386 ITPR3Q14573 2671 aa11.55□□□□□ -0.56
SEMA4D-220ENST00000492386 LINC00694P0DN24 101 aa11.55□□□□□ -0.56
SEMA4D-220ENST00000492386 C11orf44Q8N8P7 122 aa11.55□□□□□ -0.56
SEMA4D-220ENST00000492386 YAE1D1Q9NRH1 226 aa11.55□□□□□ -0.56
SEMA4D-220ENST00000492386 ZNF469Q96JG9 3925 aaPredicted RBP11.55□□□□□ -0.56
SEMA4D-220ENST00000492386 DNAJC9-AS1A6NH13 148 aa11.55□□□□□ -0.56
SEMA4D-220ENST00000492386 LINC00242Q5T6M2 205 aa11.55□□□□□ -0.56
SEMA4D-220ENST00000492386 IGLV5-39A0A0G2JS06 123 aa11.54□□□□□ -0.56
SEMA4D-220ENST00000492386 A0A1W2PRX2 142 aa11.54□□□□□ -0.56
SEMA4D-220ENST00000492386 Q6ZTI0 123 aa11.54□□□□□ -0.56
SEMA4D-220ENST00000492386 DAND5Q8N907 189 aa11.54□□□□□ -0.56
SEMA4D-220ENST00000492386 CCL24O00175 119 aa11.53□□□□□ -0.56
SEMA4D-220ENST00000492386 IFITM1P13164 125 aa11.53□□□□□ -0.56
SEMA4D-220ENST00000492386 NTM-AS1Q6ZSK4 140 aa11.53□□□□□ -0.56
SEMA4D-220ENST00000492386 FAM19A3Q7Z5A8 133 aa11.53□□□□□ -0.56
SEMA4D-220ENST00000492386 SONP18583 2426 aaKnown RBP11.53□□□□□ -0.56
SEMA4D-220ENST00000492386 TRBV10-2A0A0K0K1G8 114 aa11.53□□□□□ -0.56
SEMA4D-220ENST00000492386 K7EQD1 137 aa11.53□□□□□ -0.56
SEMA4D-220ENST00000492386 HERVK_113P63121 156 aa11.53□□□□□ -0.56
SEMA4D-220ENST00000492386 NTN5Q8WTR8 489 aaPredicted RBP11.53□□□□□ -0.56
SEMA4D-220ENST00000492386 NF1P21359 2839 aa11.53□□□□□ -0.56
SEMA4D-220ENST00000492386 TRBV10-1A0A0K0K1A3 114 aa11.52□□□□□ -0.57
SEMA4D-220ENST00000492386 A0A1B0GV72 72 aa11.52□□□□□ -0.57
SEMA4D-220ENST00000492386 NDUFA7O95182 113 aa11.52□□□□□ -0.57
SEMA4D-220ENST00000492386 RPL36AP83881 106 aaKnown RBP11.52□□□□□ -0.57
SEMA4D-220ENST00000492386 RPL36ALQ969Q0 106 aaKnown RBP11.52□□□□□ -0.57
SEMA4D-220ENST00000492386 CSDC2Q9Y534 153 aaKnown RBP11.52□□□□□ -0.57
SEMA4D-220ENST00000492386 TMEM262E9PQX1 116 aa11.51□□□□□ -0.57
SEMA4D-220ENST00000492386 ESM1Q9NQ30 184 aa11.51□□□□□ -0.57
SEMA4D-220ENST00000492386 CKS1BP61024 79 aa11.5□□□□□ -0.57
SEMA4D-220ENST00000492386 DAZ2Q13117 558 aaKnown RBP11.5□□□□□ -0.57
SEMA4D-220ENST00000492386 DAZ4Q86SG3 579 aaKnown RBP11.5□□□□□ -0.57
SEMA4D-220ENST00000492386 Q9H8V8 135 aa11.5□□□□□ -0.57
SEMA4D-220ENST00000492386 DAZ3Q9NR90 486 aaKnown RBP11.5□□□□□ -0.57
SEMA4D-220ENST00000492386 TRAV4A0A0B4J268 109 aa11.5□□□□□ -0.57
SEMA4D-220ENST00000492386 SMIM1B2RUZ4 78 aa11.5□□□□□ -0.57
SEMA4D-220ENST00000492386 RPL13AP40429 203 aaKnown RBP11.5□□□□□ -0.57
SEMA4D-220ENST00000492386 CIDEAO60543 219 aa11.49□□□□□ -0.57
SEMA4D-220ENST00000492386 COX6CP09669 75 aa11.49□□□□□ -0.57
SEMA4D-220ENST00000492386 SETXQ7Z333 2677 aaKnown RBP11.49□□□□□ -0.57
SEMA4D-220ENST00000492386 TEX49A0A1B0GTD5 131 aa11.49□□□□□ -0.57
SEMA4D-220ENST00000492386 H7C423 109 aa11.49□□□□□ -0.57
SEMA4D-220ENST00000492386 GIG44P09565 113 aaPredicted RBP11.49□□□□□ -0.57
SEMA4D-220ENST00000492386 CIRBPQ14011 172 aaKnown RBP11.49□□□□□ -0.57
SEMA4D-220ENST00000492386 WFDC11Q8NEX6 87 aa11.49□□□□□ -0.57
SEMA4D-220ENST00000492386 CLEC2BQ92478 149 aa11.49□□□□□ -0.57
SEMA4D-220ENST00000492386 CITED2Q99967 270 aaPredicted RBP11.49□□□□□ -0.57
SEMA4D-220ENST00000492386 LINC00308Q8TCZ7 52 aa11.48□□□□□ -0.57
SEMA4D-220ENST00000492386 TRAV13-1A0A0B4J241 112 aa11.48□□□□□ -0.57
SEMA4D-220ENST00000492386 GAGE12JA6NER3 117 aa11.48□□□□□ -0.57
SEMA4D-220ENST00000492386 GAGE4Q13068 117 aa11.48□□□□□ -0.57
SEMA4D-220ENST00000492386 GAGE5Q13069 117 aa11.48□□□□□ -0.57
SEMA4D-220ENST00000492386 NOP10Q9NPE3 64 aaKnown RBP11.48□□□□□ -0.57
SEMA4D-220ENST00000492386 CDC42SE2Q9NRR3 84 aa11.48□□□□□ -0.57
SEMA4D-220ENST00000492386 ZNF625Q96I27 306 aaPredicted RBP11.47□□□□□ -0.57
SEMA4D-220ENST00000492386 F5H768 121 aa11.47□□□□□ -0.57
SEMA4D-220ENST00000492386 LST1O00453 97 aa11.47□□□□□ -0.57
SEMA4D-220ENST00000492386 C2orf82Q6UX34 121 aa11.47□□□□□ -0.57
SEMA4D-220ENST00000492386 PLAC8L1A1L4L8 177 aa11.46□□□□□ -0.57
SEMA4D-220ENST00000492386 TEX29Q8N6K0 151 aa11.46□□□□□ -0.57
SEMA4D-220ENST00000492386 NIPBLQ6KC79 2804 aaeCLIP11.46□□□□□ -0.57
SEMA4D-220ENST00000492386 FLNAP21333 2647 aaKnown RBP11.46□□□□□ -0.57
SEMA4D-220ENST00000492386 UBE2WQ96B02 151 aa11.45□□□□□ -0.58
SEMA4D-220ENST00000492386 H3BT86 120 aa11.45□□□□□ -0.58
SEMA4D-220ENST00000492386 SOSTDC1Q6X4U4 206 aa11.45□□□□□ -0.58
SEMA4D-220ENST00000492386 JMJD1CQ15652 2540 aa11.44□□□□□ -0.58
SEMA4D-220ENST00000492386 NOTCH3Q9UM47 2321 aa11.44□□□□□ -0.58
SEMA4D-220ENST00000492386 A0A0U1RRA0 63 aa11.44□□□□□ -0.58
SEMA4D-220ENST00000492386 CITED1Q99966 193 aa11.44□□□□□ -0.58
SEMA4D-220ENST00000492386 WFDC10AQ9H1F0 79 aa11.44□□□□□ -0.58
SEMA4D-220ENST00000492386 SETD2Q9BYW2 2564 aaPredicted RBP11.42□□□□□ -0.58
SEMA4D-220ENST00000492386 PRIMA1Q86XR5 153 aa11.42□□□□□ -0.58
SEMA4D-220ENST00000492386 C16orf74Q96GX8 76 aa11.42□□□□□ -0.58
SEMA4D-220ENST00000492386 TMEM243Q9BU79 118 aa11.42□□□□□ -0.58
SEMA4D-220ENST00000492386 CCDC168Q8NDH2 2452 aa11.42□□□□□ -0.58
SEMA4D-220ENST00000492386 CUBNO60494 3623 aa11.42□□□□□ -0.58
SEMA4D-220ENST00000492386 CMC4P56277 68 aaPredicted RBP11.42□□□□□ -0.58
SEMA4D-220ENST00000492386 LINC01006Q8NI28 216 aa11.42□□□□□ -0.58
SEMA4D-220ENST00000492386 C19orf73Q9NVV2 129 aa11.42□□□□□ -0.58
SEMA4D-220ENST00000492386 LOC100131303A0A0U1RQF7 123 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 160.5 ms