RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 TRAV4A0A0B4J268 109 aa1.68□□□□□ -2.14
PHC3-213ENST00000491258 TRAV21A0A0B4J279 112 aa1.68□□□□□ -2.14
PHC3-213ENST00000491258 C20orf202A1L168 122 aa1.68□□□□□ -2.14
PHC3-213ENST00000491258 IBA57-AS1B1ANH7 110 aa1.68□□□□□ -2.14
PHC3-213ENST00000491258 KRBOX1C9JBD0 128 aa1.68□□□□□ -2.14
PHC3-213ENST00000491258 C9JCJ5 164 aa1.68□□□□□ -2.14
PHC3-213ENST00000491258 C17orf112F2Z3M2 114 aa1.68□□□□□ -2.14
PHC3-213ENST00000491258 M0R2P5 195 aa1.68□□□□□ -2.14
PHC3-213ENST00000491258 UPK1BO75841 260 aa1.68□□□□□ -2.14
PHC3-213ENST00000491258 MPC2O95563 127 aa1.68□□□□□ -2.14
PHC3-213ENST00000491258 IFNA1P01562 189 aa1.68□□□□□ -2.14
PHC3-213ENST00000491258 SMR3BP02814 79 aaPredicted RBP1.68□□□□□ -2.14
PHC3-213ENST00000491258 CRYGDP07320 174 aa1.68□□□□□ -2.14
PHC3-213ENST00000491258 PFN1P07737 140 aaKnown RBP1.68□□□□□ -2.14
PHC3-213ENST00000491258 ZNF25P17030 456 aaPredicted RBP1.68□□□□□ -2.14
PHC3-213ENST00000491258 EVI2AP22794 236 aa1.68□□□□□ -2.14
PHC3-213ENST00000491258 SULT1A2P50226 295 aa1.68□□□□□ -2.14
PHC3-213ENST00000491258 ZNF80P51504 273 aaPredicted RBP1.68□□□□□ -2.14
PHC3-213ENST00000491258 TAS2R45P59539 299 aa1.68□□□□□ -2.14
PHC3-213ENST00000491258 RPS20P60866 119 aaKnown RBP1.68□□□□□ -2.14
PHC3-213ENST00000491258 PKIAP61925 76 aa1.68□□□□□ -2.14
PHC3-213ENST00000491258 UBE2L3P68036 154 aaKnown RBP1.68□□□□□ -2.14
PHC3-213ENST00000491258 ACOT6Q3I5F7 207 aaPredicted RBP1.68□□□□□ -2.14
PHC3-213ENST00000491258 KHDC3LQ587J8 217 aa1.68□□□□□ -2.14
PHC3-213ENST00000491258 LINC01556Q5JQF7 62 aa1.68□□□□□ -2.14
PHC3-213ENST00000491258 CFAP126Q5VTH2 177 aa1.68□□□□□ -2.14
PHC3-213ENST00000491258 DPPA3Q6W0C5 159 aa1.68□□□□□ -2.14
PHC3-213ENST00000491258 GOLT1AQ6ZVE7 132 aa1.68□□□□□ -2.14
PHC3-213ENST00000491258 NIT1Q86X76 327 aa1.68□□□□□ -2.14
PHC3-213ENST00000491258 WFDC10BQ8IUB3 73 aa1.68□□□□□ -2.14
PHC3-213ENST00000491258 C10orf126Q8N4M7 172 aa1.68□□□□□ -2.14
PHC3-213ENST00000491258 SLC25A29Q8N8R3 303 aa1.68□□□□□ -2.14
PHC3-213ENST00000491258 NKAPP1Q8N9T2 125 aa1.68□□□□□ -2.14
PHC3-213ENST00000491258 CMTM2Q8TAZ6 248 aa1.68□□□□□ -2.14
PHC3-213ENST00000491258 SCGB1C1Q8TD33 95 aa1.68□□□□□ -2.14
PHC3-213ENST00000491258 S100ZQ8WXG8 99 aa1.68□□□□□ -2.14
PHC3-213ENST00000491258 TXNDC17Q9BRA2 123 aa1.68□□□□□ -2.14
PHC3-213ENST00000491258 SMIM3Q9BZL3 60 aa1.68□□□□□ -2.14
PHC3-213ENST00000491258 DMBT1Q9UGM3 2413 aaPredicted RBP1.68□□□□□ -2.14
PHC3-213ENST00000491258 DSCAML1Q8TD84 2053 aa1.67□□□□□ -2.14
PHC3-213ENST00000491258 HMCN2Q8NDA2 5059 aa1.67□□□□□ -2.14
PHC3-213ENST00000491258 TGIF2-C20orf24A0A0A6YYL0 155 aa1.67□□□□□ -2.14
PHC3-213ENST00000491258 TRAV8-6A0A0B4J262 113 aa1.67□□□□□ -2.14
PHC3-213ENST00000491258 TRBV6-4A0A1B0GX49 114 aa1.67□□□□□ -2.14
PHC3-213ENST00000491258 F6UZH7 168 aa1.67□□□□□ -2.14
PHC3-213ENST00000491258 M0R143 59 aa1.67□□□□□ -2.14
PHC3-213ENST00000491258 TAAR5O14804 337 aa1.67□□□□□ -2.14
PHC3-213ENST00000491258 HMGB3O15347 200 aaKnown RBP1.67□□□□□ -2.14
PHC3-213ENST00000491258 PTTG1O95997 202 aa1.67□□□□□ -2.14
PHC3-213ENST00000491258 C1QBP02746 253 aa1.67□□□□□ -2.14
PHC3-213ENST00000491258 TCRAP04437 139 aa1.67□□□□□ -2.14
PHC3-213ENST00000491258 TYMSP04818 313 aa1.67□□□□□ -2.14
PHC3-213ENST00000491258 CHTF8P0CG12 524 aa1.67□□□□□ -2.14
PHC3-213ENST00000491258 RNASE3P12724 160 aaKnown RBP1.67□□□□□ -2.14
PHC3-213ENST00000491258 S100A2P29034 98 aa1.67□□□□□ -2.14
PHC3-213ENST00000491258 DDTP30046 118 aa1.67□□□□□ -2.14
PHC3-213ENST00000491258 GCHFRP30047 84 aa1.67□□□□□ -2.14
PHC3-213ENST00000491258 RAB5CP51148 216 aa1.67□□□□□ -2.14
PHC3-213ENST00000491258 RAB5BP61020 215 aa1.67□□□□□ -2.14
PHC3-213ENST00000491258 GNG5P63218 68 aa1.67□□□□□ -2.14
PHC3-213ENST00000491258 PMVKQ15126 192 aa1.67□□□□□ -2.14
PHC3-213ENST00000491258 KRTAP13-2Q52LG2 175 aa1.67□□□□□ -2.14
PHC3-213ENST00000491258 Q5BKY6 102 aa1.67□□□□□ -2.14
PHC3-213ENST00000491258 FAM74A1Q5RGS3 127 aa1.67□□□□□ -2.14
PHC3-213ENST00000491258 LELP1Q5T871 98 aa1.67□□□□□ -2.14
PHC3-213ENST00000491258 Q5VSD8 79 aa1.67□□□□□ -2.14
PHC3-213ENST00000491258 CYB561D1Q8N8Q1 229 aa1.67□□□□□ -2.14
PHC3-213ENST00000491258 C5orf17Q8NAS9 161 aa1.67□□□□□ -2.14
PHC3-213ENST00000491258 OR10G9Q8NGN4 311 aa1.67□□□□□ -2.14
PHC3-213ENST00000491258 OR2G3Q8NGZ4 309 aa1.67□□□□□ -2.14
PHC3-213ENST00000491258 OR13C6PQ8NH95 151 aa1.67□□□□□ -2.14
PHC3-213ENST00000491258 SFT2D1Q8WV19 159 aa1.67□□□□□ -2.14
PHC3-213ENST00000491258 ASB13Q8WXK3 278 aa1.67□□□□□ -2.14
PHC3-213ENST00000491258 C14orf144Q96I85 54 aa1.67□□□□□ -2.14
PHC3-213ENST00000491258 KCNS1Q96KK3 526 aa1.67□□□□□ -2.14
PHC3-213ENST00000491258 PRADC1Q9BSG0 188 aa1.67□□□□□ -2.14
PHC3-213ENST00000491258 GTSF1LQ9H1H1 148 aa1.67□□□□□ -2.14
PHC3-213ENST00000491258 EPDR1Q9UM22 224 aa1.67□□□□□ -2.14
PHC3-213ENST00000491258 PSG8Q9UQ74 426 aa1.67□□□□□ -2.14
PHC3-213ENST00000491258 MYCBP2O75592 4640 aa1.67□□□□□ -2.14
PHC3-213ENST00000491258 FLG2Q5D862 2391 aaPredicted RBP1.66□□□□□ -2.14
PHC3-213ENST00000491258 IGHV3-73A0A0B4J1V6 119 aa1.66□□□□□ -2.14
PHC3-213ENST00000491258 A0A1W2PRE2 83 aa1.66□□□□□ -2.14
PHC3-213ENST00000491258 LINC00862A6NCI5 91 aa1.66□□□□□ -2.14
PHC3-213ENST00000491258 GGTLC3B5MD39 225 aa1.66□□□□□ -2.14
PHC3-213ENST00000491258 PPP1R2P9O14990 202 aa1.66□□□□□ -2.14
PHC3-213ENST00000491258 PSCAO43653 123 aa1.66□□□□□ -2.14
PHC3-213ENST00000491258 CXorf1O96002 111 aa1.66□□□□□ -2.14
PHC3-213ENST00000491258 GCGP01275 180 aa1.66□□□□□ -2.14
PHC3-213ENST00000491258 IGHV3-30P01768 117 aa1.66□□□□□ -2.14
PHC3-213ENST00000491258 IGHV3-33P01772 117 aa1.66□□□□□ -2.14
PHC3-213ENST00000491258 ARL14EPLP0DKL9 152 aa1.66□□□□□ -2.14
PHC3-213ENST00000491258 LINC00694P0DN24 101 aa1.66□□□□□ -2.14
PHC3-213ENST00000491258 IGHV3-30-3P0DP02 117 aa1.66□□□□□ -2.14
PHC3-213ENST00000491258 IGHV3-30-5P0DP03 117 aa1.66□□□□□ -2.14
PHC3-213ENST00000491258 MGST1P10620 155 aaKnown RBP1.66□□□□□ -2.14
PHC3-213ENST00000491258 ATP6V0CP27449 155 aa1.66□□□□□ -2.14
PHC3-213ENST00000491258 CRIP1P50238 77 aa1.66□□□□□ -2.14
PHC3-213ENST00000491258 DEFA1P59665 94 aa1.66□□□□□ -2.14
PHC3-213ENST00000491258 DEFA3P59666 94 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms