RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 MUC6Q6W4X9 2439 aa1.77□□□□□ -2.13
HMGB1P38-201ENST00000490557 SORL1Q92673 2214 aa1.77□□□□□ -2.13
HMGB1P38-201ENST00000490557 F2Z2F3 143 aa1.77□□□□□ -2.13
HMGB1P38-201ENST00000490557 F8VRH5 84 aa1.77□□□□□ -2.13
HMGB1P38-201ENST00000490557 PDCD5O14737 125 aa1.77□□□□□ -2.13
HMGB1P38-201ENST00000490557 ACYP1P07311 99 aa1.77□□□□□ -2.13
HMGB1P38-201ENST00000490557 SPTBP11277 2137 aa1.77□□□□□ -2.13
HMGB1P38-201ENST00000490557 CCL18P55774 89 aa1.77□□□□□ -2.13
HMGB1P38-201ENST00000490557 CAV3P56539 151 aa1.77□□□□□ -2.13
HMGB1P38-201ENST00000490557 PSMG4Q5JS54 123 aa1.77□□□□□ -2.13
HMGB1P38-201ENST00000490557 OBSCN-AS1Q96MR7 158 aa1.77□□□□□ -2.13
HMGB1P38-201ENST00000490557 AMELXQ99217 191 aa1.77□□□□□ -2.13
HMGB1P38-201ENST00000490557 TMEM14BQ9NUH8 114 aa1.77□□□□□ -2.13
HMGB1P38-201ENST00000490557 TANC1Q9C0D5 1861 aa1.77□□□□□ -2.13
HMGB1P38-201ENST00000490557 DLEC1Q9Y238 1755 aa1.77□□□□□ -2.13
HMGB1P38-201ENST00000490557 NRXN2Q9P2S2 1712 aa1.77□□□□□ -2.13
HMGB1P38-201ENST00000490557 TET3O43151 1660 aa1.77□□□□□ -2.13
HMGB1P38-201ENST00000490557 TET1Q8NFU7 2136 aa1.76□□□□□ -2.13
HMGB1P38-201ENST00000490557 MRC1P22897 1456 aa1.76□□□□□ -2.13
HMGB1P38-201ENST00000490557 PARP14Q460N5 1801 aa1.76□□□□□ -2.13
HMGB1P38-201ENST00000490557 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.76□□□□□ -2.13
HMGB1P38-201ENST00000490557 M0R135 149 aa1.76□□□□□ -2.13
HMGB1P38-201ENST00000490557 IGLC2P0DOY2 106 aa1.76□□□□□ -2.13
HMGB1P38-201ENST00000490557 IGLC3P0DOY3 106 aa1.76□□□□□ -2.13
HMGB1P38-201ENST00000490557 BVES-AS1Q5T3Y7 98 aa1.76□□□□□ -2.13
HMGB1P38-201ENST00000490557 UNQ6190/PRO20217Q6UXQ8 127 aa1.76□□□□□ -2.13
HMGB1P38-201ENST00000490557 ZNF563Q8TA94 476 aa1.76□□□□□ -2.13
HMGB1P38-201ENST00000490557 TOP2BQ02880 1626 aa1.76□□□□□ -2.13
HMGB1P38-201ENST00000490557 POLA1P09884 1462 aaPredicted RBP1.75□□□□□ -2.13
HMGB1P38-201ENST00000490557 RREB1Q92766 1687 aa1.75□□□□□ -2.13
HMGB1P38-201ENST00000490557 A0A087WTM6 91 aa1.75□□□□□ -2.13
HMGB1P38-201ENST00000490557 CTXND1A0A1B0GTU2 59 aa1.75□□□□□ -2.13
HMGB1P38-201ENST00000490557 H3BUT2 72 aa1.75□□□□□ -2.13
HMGB1P38-201ENST00000490557 LINC00643Q86TS7 51 aa1.75□□□□□ -2.13
HMGB1P38-201ENST00000490557 BAGE3Q86Y29 109 aa1.75□□□□□ -2.13
HMGB1P38-201ENST00000490557 CCL19Q99731 98 aa1.75□□□□□ -2.13
HMGB1P38-201ENST00000490557 IQSEC2Q5JU85 1478 aa1.75□□□□□ -2.13
HMGB1P38-201ENST00000490557 RGPD4Q7Z3J3 1758 aa1.75□□□□□ -2.13
HMGB1P38-201ENST00000490557 DOCK11Q5JSL3 2073 aa1.75□□□□□ -2.13
HMGB1P38-201ENST00000490557 EXPH5Q8NEV8 1989 aa1.74□□□□□ -2.13
HMGB1P38-201ENST00000490557 KIF14Q15058 1648 aa1.74□□□□□ -2.13
HMGB1P38-201ENST00000490557 DNMBPQ6XZF7 1577 aa1.74□□□□□ -2.13
HMGB1P38-201ENST00000490557 FAM223BA6NKX1 122 aa1.74□□□□□ -2.13
HMGB1P38-201ENST00000490557 F8WEM9 126 aa1.74□□□□□ -2.13
HMGB1P38-201ENST00000490557 UQCR11O14957 56 aa1.74□□□□□ -2.13
HMGB1P38-201ENST00000490557 EFNA4P52798 201 aa1.74□□□□□ -2.13
HMGB1P38-201ENST00000490557 CFAP126Q5VTH2 177 aa1.74□□□□□ -2.13
HMGB1P38-201ENST00000490557 BAGE2Q86Y30 109 aa1.74□□□□□ -2.13
HMGB1P38-201ENST00000490557 WFDC6Q9BQY6 131 aa1.74□□□□□ -2.13
HMGB1P38-201ENST00000490557 LINC01558Q9Y6Z2 57 aa1.74□□□□□ -2.13
HMGB1P38-201ENST00000490557 DOCK2Q92608 1830 aa1.74□□□□□ -2.13
HMGB1P38-201ENST00000490557 EHBP1L1Q8N3D4 1523 aa1.74□□□□□ -2.13
HMGB1P38-201ENST00000490557 PPLO60437 1756 aa1.74□□□□□ -2.13
HMGB1P38-201ENST00000490557 NLRP1Q9C000 1473 aa1.74□□□□□ -2.13
HMGB1P38-201ENST00000490557 NRXN1Q9ULB1 1477 aa1.74□□□□□ -2.13
HMGB1P38-201ENST00000490557 ANKARQ7Z5J8 1434 aa1.74□□□□□ -2.13
HMGB1P38-201ENST00000490557 CLTCQ00610 1675 aaKnown RBP1.74□□□□□ -2.13
HMGB1P38-201ENST00000490557 TCHHQ07283 1943 aa1.74□□□□□ -2.13
HMGB1P38-201ENST00000490557 PSME4Q14997 1843 aa1.73□□□□□ -2.13
HMGB1P38-201ENST00000490557 DIP2CQ9Y2E4 1556 aa1.73□□□□□ -2.13
HMGB1P38-201ENST00000490557 STRCP1A6NGW2 1772 aa1.73□□□□□ -2.13
HMGB1P38-201ENST00000490557 SDK1Q7Z5N4 2213 aa1.73□□□□□ -2.13
HMGB1P38-201ENST00000490557 A0A1B0GWA3 101 aa1.73□□□□□ -2.13
HMGB1P38-201ENST00000490557 HMGN2P05204 90 aaKnown RBP1.73□□□□□ -2.13
HMGB1P38-201ENST00000490557 HMGN3Q15651 99 aa1.73□□□□□ -2.13
HMGB1P38-201ENST00000490557 LINC01600Q96MT4 127 aa1.73□□□□□ -2.13
HMGB1P38-201ENST00000490557 SUPT6HQ7KZ85 1726 aaKnown RBP1.73□□□□□ -2.13
HMGB1P38-201ENST00000490557 CCDC88BA6NC98 1476 aa1.73□□□□□ -2.13
HMGB1P38-201ENST00000490557 VWDEQ8N2E2 1590 aa1.72□□□□□ -2.13
HMGB1P38-201ENST00000490557 C7orf77A4D0Y5 90 aa1.72□□□□□ -2.13
HMGB1P38-201ENST00000490557 CFDP00746 253 aaPredicted RBP1.72□□□□□ -2.13
HMGB1P38-201ENST00000490557 KRTAP21-3Q3LHN1 58 aa1.72□□□□□ -2.13
HMGB1P38-201ENST00000490557 PRR15LQ9BU68 103 aa1.72□□□□□ -2.13
HMGB1P38-201ENST00000490557 RGPD3A6NKT7 1758 aaPredicted RBP1.72□□□□□ -2.13
HMGB1P38-201ENST00000490557 PEAK1Q9H792 1746 aa1.71□□□□□ -2.13
HMGB1P38-201ENST00000490557 HMGXB3Q12766 1538 aa1.71□□□□□ -2.14
HMGB1P38-201ENST00000490557 ABCC2Q92887 1545 aa1.71□□□□□ -2.14
HMGB1P38-201ENST00000490557 TRGV1A0A0A0MS02 117 aa1.71□□□□□ -2.14
HMGB1P38-201ENST00000490557 TRAV1-2A0A0B4J238 106 aa1.71□□□□□ -2.14
HMGB1P38-201ENST00000490557 TRBV30A0A0K0K1B3 111 aa1.71□□□□□ -2.14
HMGB1P38-201ENST00000490557 C10orf142B7Z368 130 aa1.71□□□□□ -2.14
HMGB1P38-201ENST00000490557 M0R3E3 92 aa1.71□□□□□ -2.14
HMGB1P38-201ENST00000490557 MGPP08493 103 aa1.71□□□□□ -2.14
HMGB1P38-201ENST00000490557 C18orf32Q8TCD1 76 aa1.71□□□□□ -2.14
HMGB1P38-201ENST00000490557 Q96NJ1 140 aa1.71□□□□□ -2.14
HMGB1P38-201ENST00000490557 PSENENQ9NZ42 101 aa1.71□□□□□ -2.14
HMGB1P38-201ENST00000490557 CLIP1P30622 1438 aa1.71□□□□□ -2.14
HMGB1P38-201ENST00000490557 CDK13Q14004 1512 aaKnown RBP1.71□□□□□ -2.14
HMGB1P38-201ENST00000490557 COL4A6Q14031 1691 aa1.71□□□□□ -2.14
HMGB1P38-201ENST00000490557 MAP3K4Q9Y6R4 1608 aa1.7□□□□□ -2.14
HMGB1P38-201ENST00000490557 IQCF6A8MYZ5 107 aa1.7□□□□□ -2.14
HMGB1P38-201ENST00000490557 NCR3O14931 201 aa1.7□□□□□ -2.14
HMGB1P38-201ENST00000490557 LEPROTL1O95214 131 aa1.7□□□□□ -2.14
HMGB1P38-201ENST00000490557 ARMS2P0C7Q2 107 aa1.7□□□□□ -2.14
HMGB1P38-201ENST00000490557 ACYP2P14621 99 aa1.7□□□□□ -2.14
HMGB1P38-201ENST00000490557 COX17Q14061 63 aa1.7□□□□□ -2.14
HMGB1P38-201ENST00000490557 Q5BKY6 102 aa1.7□□□□□ -2.14
HMGB1P38-201ENST00000490557 SMIM4Q8WVI0 70 aa1.7□□□□□ -2.14
HMGB1P38-201ENST00000490557 GBF1Q92538 1859 aa1.7□□□□□ -2.14
HMGB1P38-201ENST00000490557 DIP2BQ9P265 1576 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms