RNA–Protein interactions for RNA: ENST00000490447.6

YIPF3-208, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 1,321 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-208ENST00000490447 RPP21Q9H633 154 aaKnown RBP11.25□□□□□ -0.61
YIPF3-208ENST00000490447 IGKV2-24A0A0C4DH68 120 aa11.24□□□□□ -0.61
YIPF3-208ENST00000490447 PPP1R2P9O14990 202 aa11.24□□□□□ -0.61
YIPF3-208ENST00000490447 NCR2O95944 276 aa11.24□□□□□ -0.61
YIPF3-208ENST00000490447 MT-ND4LP03901 98 aa11.24□□□□□ -0.61
YIPF3-208ENST00000490447 RHEBQ15382 184 aa11.24□□□□□ -0.61
YIPF3-208ENST00000490447 OSTCQ9NRP0 149 aa11.24□□□□□ -0.61
YIPF3-208ENST00000490447 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.23□□□□□ -0.61
YIPF3-208ENST00000490447 IGKV2-29A2NJV5 120 aaPredicted RBP11.23□□□□□ -0.61
YIPF3-208ENST00000490447 H7C423 109 aa11.23□□□□□ -0.61
YIPF3-208ENST00000490447 ANAPC16Q96DE5 110 aa11.23□□□□□ -0.61
YIPF3-208ENST00000490447 RNASE7Q9H1E1 156 aaKnown RBP11.23□□□□□ -0.61
YIPF3-208ENST00000490447 PRSS3P2Q8NHM4 247 aa11.22□□□□□ -0.61
YIPF3-208ENST00000490447 RPL39LQ96EH5 51 aaKnown RBP11.22□□□□□ -0.61
YIPF3-208ENST00000490447 TNXBP22105 4242 aa11.22□□□□□ -0.61
YIPF3-208ENST00000490447 GVQW2A0A096LPI5 108 aaPredicted RBP11.21□□□□□ -0.61
YIPF3-208ENST00000490447 FGF6P10767 208 aa11.21□□□□□ -0.61
YIPF3-208ENST00000490447 STPG4Q8N801 248 aa11.21□□□□□ -0.61
YIPF3-208ENST00000490447 BTF3L4Q96K17 158 aa11.21□□□□□ -0.61
YIPF3-208ENST00000490447 CTDSP1Q9GZU7 261 aa11.21□□□□□ -0.61
YIPF3-208ENST00000490447 PKIGQ9Y2B9 76 aa11.21□□□□□ -0.61
YIPF3-208ENST00000490447 C7orf77A4D0Y5 90 aa11.2□□□□□ -0.62
YIPF3-208ENST00000490447 SDHAF1A6NFY7 115 aa11.2□□□□□ -0.62
YIPF3-208ENST00000490447 GATCO43716 136 aaKnown RBP11.2□□□□□ -0.62
YIPF3-208ENST00000490447 ZNF25P17030 456 aaPredicted RBP11.2□□□□□ -0.62
YIPF3-208ENST00000490447 CT83Q5H943 113 aa11.2□□□□□ -0.62
YIPF3-208ENST00000490447 TMEM101Q96IK0 257 aa11.2□□□□□ -0.62
YIPF3-208ENST00000490447 OR5A1Q8NGJ0 315 aa11.19□□□□□ -0.62
YIPF3-208ENST00000490447 RPS10P5Q9NQ39 176 aa11.19□□□□□ -0.62
YIPF3-208ENST00000490447 TMEM242Q9NWH2 141 aa11.19□□□□□ -0.62
YIPF3-208ENST00000490447 LINC00474Q9P2X8 69 aa11.19□□□□□ -0.62
YIPF3-208ENST00000490447 A8MWL6 223 aa11.18□□□□□ -0.62
YIPF3-208ENST00000490447 PMCHP20382 165 aa11.18□□□□□ -0.62
YIPF3-208ENST00000490447 XCL1P47992 114 aa11.18□□□□□ -0.62
YIPF3-208ENST00000490447 PRR3P79522 188 aaKnown RBP11.18□□□□□ -0.62
YIPF3-208ENST00000490447 I3L3M4 83 aa11.17□□□□□ -0.62
YIPF3-208ENST00000490447 FOXI1Q12951 378 aa11.17□□□□□ -0.62
YIPF3-208ENST00000490447 V9GYV3 84 aa11.17□□□□□ -0.62
YIPF3-208ENST00000490447 A0A096LNI7 61 aa11.16□□□□□ -0.62
YIPF3-208ENST00000490447 FAM231BA6NCW3 169 aa11.16□□□□□ -0.62
YIPF3-208ENST00000490447 FOXA3P55318 350 aaPredicted RBP11.16□□□□□ -0.62
YIPF3-208ENST00000490447 BORCS7Q96B45 105 aa11.16□□□□□ -0.62
YIPF3-208ENST00000490447 IMMP2LQ96T52 175 aa11.16□□□□□ -0.62
YIPF3-208ENST00000490447 CCL25O15444 150 aa11.15□□□□□ -0.62
YIPF3-208ENST00000490447 TSKUQ8WUA8 353 aa11.15□□□□□ -0.62
YIPF3-208ENST00000490447 MRAP2Q96G30 205 aa11.15□□□□□ -0.62
YIPF3-208ENST00000490447 LINC01600Q96MT4 127 aa11.15□□□□□ -0.62
YIPF3-208ENST00000490447 IGHV1-58A0A0C4DH39 117 aa11.14□□□□□ -0.63
YIPF3-208ENST00000490447 CARD19Q96LW7 228 aa11.14□□□□□ -0.63
YIPF3-208ENST00000490447 LRP2P98164 4655 aa11.14□□□□□ -0.63
YIPF3-208ENST00000490447 TRBV6-5A0A0K0K1A5 114 aa11.13□□□□□ -0.63
YIPF3-208ENST00000490447 LINC00959A0A1B0GUT2 108 aa11.13□□□□□ -0.63
YIPF3-208ENST00000490447 SS18Q15532 418 aa11.13□□□□□ -0.63
YIPF3-208ENST00000490447 ST20Q9HBF5 79 aa11.13□□□□□ -0.63
YIPF3-208ENST00000490447 SMIM27A0A1W2PRY6 76 aa11.12□□□□□ -0.63
YIPF3-208ENST00000490447 ZNF561-AS1K7EIQ3 104 aa11.12□□□□□ -0.63
YIPF3-208ENST00000490447 S100PP25815 95 aa11.12□□□□□ -0.63
YIPF3-208ENST00000490447 REG3GQ6UW15 175 aa11.12□□□□□ -0.63
YIPF3-208ENST00000490447 LINC00526Q96FQ7 95 aa11.11□□□□□ -0.63
YIPF3-208ENST00000490447 SMCO4Q9NRQ5 59 aa11.11□□□□□ -0.63
YIPF3-208ENST00000490447 NAT8BQ9UHF3 227 aa11.11□□□□□ -0.63
YIPF3-208ENST00000490447 SPINK6Q6UWN8 80 aa11.1□□□□□ -0.63
YIPF3-208ENST00000490447 TRAV9-1A0A075B6T8 112 aa11.09□□□□□ -0.63
YIPF3-208ENST00000490447 HIGD1CA8MV81 97 aa11.09□□□□□ -0.63
YIPF3-208ENST00000490447 TSHBP01222 138 aa11.09□□□□□ -0.63
YIPF3-208ENST00000490447 ESDP10768 282 aa11.09□□□□□ -0.63
YIPF3-208ENST00000490447 SYCNQ0VAF6 134 aa11.09□□□□□ -0.63
YIPF3-208ENST00000490447 CD164L2Q6UWJ8 174 aa11.09□□□□□ -0.63
YIPF3-208ENST00000490447 Q6ZRP5 223 aa11.09□□□□□ -0.63
YIPF3-208ENST00000490447 A0A0J9YXV3 536 aa11.09□□□□□ -0.63
YIPF3-208ENST00000490447 MRPL52Q86TS9 123 aaKnown RBP11.09□□□□□ -0.63
YIPF3-208ENST00000490447 ZNF664Q8N3J9 261 aa11.09□□□□□ -0.63
YIPF3-208ENST00000490447 CDC42SE2Q9NRR3 84 aa11.09□□□□□ -0.63
YIPF3-208ENST00000490447 A0A1B0GUT8 65 aa11.08□□□□□ -0.64
YIPF3-208ENST00000490447 MALP21145 153 aa11.08□□□□□ -0.64
YIPF3-208ENST00000490447 CAMPP49913 170 aa11.08□□□□□ -0.64
YIPF3-208ENST00000490447 NUP35Q8NFH5 326 aa11.08□□□□□ -0.64
YIPF3-208ENST00000490447 TMEM191AQ9H0A3 160 aa11.08□□□□□ -0.64
YIPF3-208ENST00000490447 RNF213Q63HN8 5207 aa11.07□□□□□ -0.64
YIPF3-208ENST00000490447 GAS8-AS1O95177 125 aa11.07□□□□□ -0.64
YIPF3-208ENST00000490447 FCER1GP30273 86 aa11.07□□□□□ -0.64
YIPF3-208ENST00000490447 TRBV27A0A0K0K1C4 114 aa11.06□□□□□ -0.64
YIPF3-208ENST00000490447 SMAGPQ0VAQ4 97 aa11.06□□□□□ -0.64
YIPF3-208ENST00000490447 GAGE2BQ13066 116 aa11.06□□□□□ -0.64
YIPF3-208ENST00000490447 LOC107984640A0A0U1RRK4 108 aa11.05□□□□□ -0.64
YIPF3-208ENST00000490447 A0A1B0GW15 77 aa11.05□□□□□ -0.64
YIPF3-208ENST00000490447 PTTG1IPP53801 180 aa11.05□□□□□ -0.64
YIPF3-208ENST00000490447 POLR2KP53803 58 aaKnown RBP11.05□□□□□ -0.64
YIPF3-208ENST00000490447 RIGQ13278 110 aa11.05□□□□□ -0.64
YIPF3-208ENST00000490447 ATP5L2Q7Z4Y8 100 aa11.05□□□□□ -0.64
YIPF3-208ENST00000490447 CBLN2Q8IUK8 224 aa11.05□□□□□ -0.64
YIPF3-208ENST00000490447 C1orf196B1AJZ1 125 aa11.04□□□□□ -0.64
YIPF3-208ENST00000490447 COX7A2LO14548 114 aa11.04□□□□□ -0.64
YIPF3-208ENST00000490447 RAB4AP20338 218 aa11.04□□□□□ -0.64
YIPF3-208ENST00000490447 ODF1Q14990 250 aa11.04□□□□□ -0.64
YIPF3-208ENST00000490447 AMN1Q8IY45 258 aa11.04□□□□□ -0.64
YIPF3-208ENST00000490447 IGLV4-69A0A075B6H9 119 aa11.03□□□□□ -0.64
YIPF3-208ENST00000490447 TRBV24-1A0A075B6N3 115 aa11.03□□□□□ -0.64
YIPF3-208ENST00000490447 VCYO14598 125 aa11.03□□□□□ -0.64
YIPF3-208ENST00000490447 SCO1O75880 301 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms