RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 AP5S1Q9NUS5 200 aa16.04■□□□□ 0.16
HMGN1-217ENST00000489072 A0A1B0GW15 77 aa16.03■□□□□ 0.16
HMGN1-217ENST00000489072 C7orf77A4D0Y5 90 aa16.03■□□□□ 0.16
HMGN1-217ENST00000489072 PPP1R17O96001 155 aa16.03■□□□□ 0.16
HMGN1-217ENST00000489072 KRTAP10-4P60372 401 aaPredicted RBP16.03■□□□□ 0.16
HMGN1-217ENST00000489072 FOXI1Q12951 378 aa16.02■□□□□ 0.16
HMGN1-217ENST00000489072 MRPL54Q6P161 138 aaKnown RBP16.02■□□□□ 0.16
HMGN1-217ENST00000489072 CDC42SE2Q9NRR3 84 aa16.02■□□□□ 0.16
HMGN1-217ENST00000489072 LINC00959A0A1B0GUT2 108 aa16.01■□□□□ 0.15
HMGN1-217ENST00000489072 A0A1B0GXF2 115 aa16.01■□□□□ 0.15
HMGN1-217ENST00000489072 FCER1GP30273 86 aa16.01■□□□□ 0.15
HMGN1-217ENST00000489072 CFAP161Q6P656 301 aa16.01■□□□□ 0.15
HMGN1-217ENST00000489072 HBBP68871 147 aa16■□□□□ 0.15
HMGN1-217ENST00000489072 HIGD2BQ4VC39 106 aa16■□□□□ 0.15
HMGN1-217ENST00000489072 IGHV3-64A0A075B6Q5 118 aa15.99■□□□□ 0.15
HMGN1-217ENST00000489072 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.99■□□□□ 0.15
HMGN1-217ENST00000489072 LINC00862A6NCI5 91 aa15.99■□□□□ 0.15
HMGN1-217ENST00000489072 PPP1R2P9O14990 202 aa15.99■□□□□ 0.15
HMGN1-217ENST00000489072 XCL1P47992 114 aa15.99■□□□□ 0.15
HMGN1-217ENST00000489072 TRBV24-1A0A075B6N3 115 aa15.98■□□□□ 0.15
HMGN1-217ENST00000489072 CCL25O15444 150 aa15.98■□□□□ 0.15
HMGN1-217ENST00000489072 CKS2P33552 79 aa15.98■□□□□ 0.15
HMGN1-217ENST00000489072 ZNF664Q8N3J9 261 aa15.98■□□□□ 0.15
HMGN1-217ENST00000489072 KIR2DL4Q99706 377 aa15.98■□□□□ 0.15
HMGN1-217ENST00000489072 CIRBPQ14011 172 aaKnown RBP15.97■□□□□ 0.15
HMGN1-217ENST00000489072 C20orf78Q9BR46 151 aa15.97■□□□□ 0.15
HMGN1-217ENST00000489072 GVQW2A0A096LPI5 108 aaPredicted RBP15.96■□□□□ 0.15
HMGN1-217ENST00000489072 S100A8P05109 93 aa15.96■□□□□ 0.15
HMGN1-217ENST00000489072 RAB14P61106 215 aa15.96■□□□□ 0.15
HMGN1-217ENST00000489072 UBE2D4Q9Y2X8 147 aa15.96■□□□□ 0.15
HMGN1-217ENST00000489072 D6R8Y8 96 aa15.95■□□□□ 0.14
HMGN1-217ENST00000489072 TNFRSF6BO95407 300 aa15.95■□□□□ 0.14
HMGN1-217ENST00000489072 RPL32P62910 135 aaKnown RBP15.95■□□□□ 0.14
HMGN1-217ENST00000489072 F8W036 122 aa15.94■□□□□ 0.14
HMGN1-217ENST00000489072 CHTF8P0CG12 524 aa15.94■□□□□ 0.14
HMGN1-217ENST00000489072 SS18Q15532 418 aa15.94■□□□□ 0.14
HMGN1-217ENST00000489072 CSDC2Q9Y534 153 aaKnown RBP15.94■□□□□ 0.14
HMGN1-217ENST00000489072 PKHD1L1Q86WI1 4243 aa15.92■□□□□ 0.14
HMGN1-217ENST00000489072 NPYP01303 97 aa15.92■□□□□ 0.14
HMGN1-217ENST00000489072 RNASE13Q5GAN3 156 aaKnown RBP15.92■□□□□ 0.14
HMGN1-217ENST00000489072 SMIM2Q9BVW6 85 aa15.92■□□□□ 0.14
HMGN1-217ENST00000489072 CD164L2Q6UWJ8 174 aa15.91■□□□□ 0.14
HMGN1-217ENST00000489072 ATP5L2Q7Z4Y8 100 aa15.91■□□□□ 0.14
HMGN1-217ENST00000489072 RPL37AP61513 92 aaKnown RBP15.9■□□□□ 0.14
HMGN1-217ENST00000489072 PNRC1Q12796 327 aaPredicted RBP15.9■□□□□ 0.14
HMGN1-217ENST00000489072 Q6ZUT4 128 aa15.9■□□□□ 0.14
HMGN1-217ENST00000489072 SPACA4Q8TDM5 124 aa15.9■□□□□ 0.14
HMGN1-217ENST00000489072 LRP1Q07954 4544 aaKnown RBP15.9■□□□□ 0.14
HMGN1-217ENST00000489072 IGHV1-58A0A0C4DH39 117 aa15.89■□□□□ 0.13
HMGN1-217ENST00000489072 COX6A2Q02221 97 aa15.89■□□□□ 0.13
HMGN1-217ENST00000489072 SMAGPQ0VAQ4 97 aa15.89■□□□□ 0.13
HMGN1-217ENST00000489072 CLLU1Q5K131 121 aa15.89■□□□□ 0.13
HMGN1-217ENST00000489072 LINC00526Q96FQ7 95 aa15.89■□□□□ 0.13
HMGN1-217ENST00000489072 TIMM21Q9BVV7 248 aa15.89■□□□□ 0.13
HMGN1-217ENST00000489072 PPBPP02775 128 aa15.88■□□□□ 0.13
HMGN1-217ENST00000489072 RPL39P62891 51 aaKnown RBP15.88■□□□□ 0.13
HMGN1-217ENST00000489072 PRSS3P2Q8NHM4 247 aa15.88■□□□□ 0.13
HMGN1-217ENST00000489072 A0A087WYN8 130 aa15.87■□□□□ 0.13
HMGN1-217ENST00000489072 PHOX2AO14813 284 aa15.87■□□□□ 0.13
HMGN1-217ENST00000489072 TMEM18Q96B42 140 aa15.87■□□□□ 0.13
HMGN1-217ENST00000489072 C1orf196B1AJZ1 125 aa15.86■□□□□ 0.13
HMGN1-217ENST00000489072 TCAPO15273 167 aa15.86■□□□□ 0.13
HMGN1-217ENST00000489072 MT-ND4LP03901 98 aa15.86■□□□□ 0.13
HMGN1-217ENST00000489072 ORMDL3Q8N138 153 aa15.86■□□□□ 0.13
HMGN1-217ENST00000489072 FAM104AQ969W3 186 aa15.86■□□□□ 0.13
HMGN1-217ENST00000489072 ANAPC16Q96DE5 110 aa15.86■□□□□ 0.13
HMGN1-217ENST00000489072 DPH3Q96FX2 82 aa15.86■□□□□ 0.13
HMGN1-217ENST00000489072 TRAV13-1A0A0B4J241 112 aa15.85■□□□□ 0.13
HMGN1-217ENST00000489072 KRTAP29-1A8MX34 341 aaPredicted RBP15.85■□□□□ 0.13
HMGN1-217ENST00000489072 TMEM136Q6ZRR5 245 aa15.85■□□□□ 0.13
HMGN1-217ENST00000489072 FAT3Q8TDW7 4589 aa15.84■□□□□ 0.13
HMGN1-217ENST00000489072 IFITM2Q01629 132 aa15.84■□□□□ 0.13
HMGN1-217ENST00000489072 PRELID3AQ96N28 172 aa15.84■□□□□ 0.13
HMGN1-217ENST00000489072 J3QL48 77 aa15.83■□□□□ 0.12
HMGN1-217ENST00000489072 HNRNPA3P51991 378 aaKnown RBP15.83■□□□□ 0.12
HMGN1-217ENST00000489072 OPRPNQ99935 248 aaPredicted RBP15.82■□□□□ 0.12
HMGN1-217ENST00000489072 PLAC8Q9NZF1 115 aa15.82■□□□□ 0.12
HMGN1-217ENST00000489072 IGKV2-24A0A0C4DH68 120 aa15.81■□□□□ 0.12
HMGN1-217ENST00000489072 COX7A2LO14548 114 aa15.81■□□□□ 0.12
HMGN1-217ENST00000489072 CARD19Q96LW7 228 aa15.81■□□□□ 0.12
HMGN1-217ENST00000489072 A0A096LNI7 61 aa15.8■□□□□ 0.12
HMGN1-217ENST00000489072 ADCYAP1P18509 176 aa15.8■□□□□ 0.12
HMGN1-217ENST00000489072 MAJINQ3KP22 176 aa15.8■□□□□ 0.12
HMGN1-217ENST00000489072 SPANXA1Q9NS26 97 aa15.8■□□□□ 0.12
HMGN1-217ENST00000489072 ZNF561-AS1K7EIQ3 104 aa15.79■□□□□ 0.12
HMGN1-217ENST00000489072 MALP21145 153 aa15.79■□□□□ 0.12
HMGN1-217ENST00000489072 MRPS36P82909 103 aaKnown RBP15.78■□□□□ 0.12
HMGN1-217ENST00000489072 SYCNQ0VAF6 134 aa15.78■□□□□ 0.12
HMGN1-217ENST00000489072 C5orf38Q86SI9 138 aa15.78■□□□□ 0.12
HMGN1-217ENST00000489072 IGLV4-69A0A075B6H9 119 aa15.77■□□□□ 0.12
HMGN1-217ENST00000489072 PRSS47A8MTI9 375 aa15.77■□□□□ 0.12
HMGN1-217ENST00000489072 RAB5AP20339 215 aa15.76■□□□□ 0.11
HMGN1-217ENST00000489072 LOC389332A0A1B0GUA5 103 aa15.75■□□□□ 0.11
HMGN1-217ENST00000489072 UQCC3Q6UW78 93 aa15.75■□□□□ 0.11
HMGN1-217ENST00000489072 LAMTOR2Q9Y2Q5 125 aa15.75■□□□□ 0.11
HMGN1-217ENST00000489072 TMEM218A2RU14 115 aa15.74■□□□□ 0.11
HMGN1-217ENST00000489072 Q6ZRU5 148 aa15.74■□□□□ 0.11
HMGN1-217ENST00000489072 STPG4Q8N801 248 aa15.74■□□□□ 0.11
HMGN1-217ENST00000489072 MAP1LC3AQ9H492 121 aa15.73■□□□□ 0.11
HMGN1-217ENST00000489072 IFITM10A6NMD0 228 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms