RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 NBDYA0A0U1RRE5 68 aa10.66□□□□□ -0.7
APOE-205ENST00000485628 IGHV3-30P01768 117 aa10.66□□□□□ -0.7
APOE-205ENST00000485628 IGHV3-33P01772 117 aa10.66□□□□□ -0.7
APOE-205ENST00000485628 IGHV3-30-3P0DP02 117 aa10.66□□□□□ -0.7
APOE-205ENST00000485628 IGHV3-30-5P0DP03 117 aa10.66□□□□□ -0.7
APOE-205ENST00000485628 BTF3P20290 206 aaKnown RBP10.66□□□□□ -0.7
APOE-205ENST00000485628 NDUFA6P56556 154 aa10.66□□□□□ -0.7
APOE-205ENST00000485628 IGLV4-3A0A075B6K6 122 aa10.65□□□□□ -0.7
APOE-205ENST00000485628 HSBP1O75506 76 aa10.65□□□□□ -0.7
APOE-205ENST00000485628 SMAGPQ0VAQ4 97 aa10.65□□□□□ -0.7
APOE-205ENST00000485628 ENHOQ6UWT2 76 aa10.65□□□□□ -0.7
APOE-205ENST00000485628 FAM19A2Q8N3H0 131 aa10.65□□□□□ -0.7
APOE-205ENST00000485628 ZNF664Q8N3J9 261 aa10.65□□□□□ -0.7
APOE-205ENST00000485628 C10orf126Q8N4M7 172 aa10.65□□□□□ -0.7
APOE-205ENST00000485628 AMELXQ99217 191 aa10.65□□□□□ -0.7
APOE-205ENST00000485628 OPRPNQ99935 248 aaPredicted RBP10.65□□□□□ -0.7
APOE-205ENST00000485628 AMMECR1LQ6DCA0 310 aa10.64□□□□□ -0.71
APOE-205ENST00000485628 LINC00173Q6ZV60 143 aa10.64□□□□□ -0.71
APOE-205ENST00000485628 TMEM141Q96I45 108 aa10.64□□□□□ -0.71
APOE-205ENST00000485628 HYDINQ4G0P3 5121 aa10.64□□□□□ -0.71
APOE-205ENST00000485628 TRAV9-2A0A087WT02 112 aa10.63□□□□□ -0.71
APOE-205ENST00000485628 Q6ZUT4 128 aa10.63□□□□□ -0.71
APOE-205ENST00000485628 OR5A1Q8NGJ0 315 aa10.63□□□□□ -0.71
APOE-205ENST00000485628 PACRGQ96M98 296 aaPredicted RBP10.63□□□□□ -0.71
APOE-205ENST00000485628 KLK12Q9UKR0 248 aa10.63□□□□□ -0.71
APOE-205ENST00000485628 ANGP03950 147 aaKnown RBP10.62□□□□□ -0.71
APOE-205ENST00000485628 TTC32Q5I0X7 151 aa10.62□□□□□ -0.71
APOE-205ENST00000485628 LINC00269Q8N2A0 174 aa10.62□□□□□ -0.71
APOE-205ENST00000485628 TMEM101Q96IK0 257 aa10.62□□□□□ -0.71
APOE-205ENST00000485628 SCGB3A1Q96QR1 104 aa10.62□□□□□ -0.71
APOE-205ENST00000485628 C5orf52A6NGY3 159 aa10.61□□□□□ -0.71
APOE-205ENST00000485628 KRTAP26-1Q6PEX3 210 aa10.61□□□□□ -0.71
APOE-205ENST00000485628 REG3AQ06141 175 aa10.6□□□□□ -0.71
APOE-205ENST00000485628 DGAT2L7PQ6IED9 249 aa10.6□□□□□ -0.71
APOE-205ENST00000485628 Q6ZRN7 208 aaPredicted RBP10.6□□□□□ -0.71
APOE-205ENST00000485628 FAM19A3Q7Z5A8 133 aa10.6□□□□□ -0.71
APOE-205ENST00000485628 HIST3H2BBQ8N257 126 aa10.6□□□□□ -0.71
APOE-205ENST00000485628 ATP5LO75964 103 aa10.59□□□□□ -0.71
APOE-205ENST00000485628 BAALCQ8WXS3 180 aa10.59□□□□□ -0.71
APOE-205ENST00000485628 RYR2Q92736 4967 aa10.59□□□□□ -0.71
APOE-205ENST00000485628 LINC00959A0A1B0GUT2 108 aa10.58□□□□□ -0.72
APOE-205ENST00000485628 IFITM10A6NMD0 228 aa10.58□□□□□ -0.72
APOE-205ENST00000485628 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.58□□□□□ -0.72
APOE-205ENST00000485628 MIAQ16674 131 aa10.58□□□□□ -0.72
APOE-205ENST00000485628 RNASE13Q5GAN3 156 aaKnown RBP10.58□□□□□ -0.72
APOE-205ENST00000485628 IFI27L1Q96BM0 104 aa10.58□□□□□ -0.72
APOE-205ENST00000485628 DNAH2Q9P225 4427 aa10.57□□□□□ -0.72
APOE-205ENST00000485628 TRAV8-3A0A0A6YYJ7 113 aa10.57□□□□□ -0.72
APOE-205ENST00000485628 TRAV8-4A0A0B4J246 113 aa10.57□□□□□ -0.72
APOE-205ENST00000485628 CCL25O15444 150 aa10.57□□□□□ -0.72
APOE-205ENST00000485628 LEPROTL1O95214 131 aa10.57□□□□□ -0.72
APOE-205ENST00000485628 SNRPEP62304 92 aaKnown RBP10.57□□□□□ -0.72
APOE-205ENST00000485628 PAPPA-AS1Q5QFB9 102 aa10.57□□□□□ -0.72
APOE-205ENST00000485628 ZC2HC1BQ5TFG8 222 aa10.57□□□□□ -0.72
APOE-205ENST00000485628 UBE2WQ96B02 151 aa10.57□□□□□ -0.72
APOE-205ENST00000485628 CST9LQ9H4G1 147 aa10.57□□□□□ -0.72
APOE-205ENST00000485628 M0R2N4 97 aa10.56□□□□□ -0.72
APOE-205ENST00000485628 UBE2D1P51668 147 aa10.56□□□□□ -0.72
APOE-205ENST00000485628 VCX2Q9H322 139 aa10.56□□□□□ -0.72
APOE-205ENST00000485628 TRAV12-1A0A0B4J245 112 aa10.55□□□□□ -0.72
APOE-205ENST00000485628 S100A6P06703 90 aa10.55□□□□□ -0.72
APOE-205ENST00000485628 PMVKQ15126 192 aa10.55□□□□□ -0.72
APOE-205ENST00000485628 TEX43Q6ZNM6 134 aa10.55□□□□□ -0.72
APOE-205ENST00000485628 HSPB8Q9UJY1 196 aa10.55□□□□□ -0.72
APOE-205ENST00000485628 PRSS29PA6NIE9 313 aa10.54□□□□□ -0.72
APOE-205ENST00000485628 CLPSL2Q6UWE3 100 aa10.54□□□□□ -0.72
APOE-205ENST00000485628 Q6ZN92 141 aa10.54□□□□□ -0.72
APOE-205ENST00000485628 SPATA12Q7Z6I5 190 aa10.54□□□□□ -0.72
APOE-205ENST00000485628 HIST1H2BLQ99880 126 aa10.54□□□□□ -0.72
APOE-205ENST00000485628 DNAH10Q8IVF4 4471 aa10.54□□□□□ -0.72
APOE-205ENST00000485628 FABP4P15090 132 aa10.53□□□□□ -0.72
APOE-205ENST00000485628 LINC00242Q5T6M2 205 aa10.53□□□□□ -0.72
APOE-205ENST00000485628 C6orf223Q8N319 242 aa10.53□□□□□ -0.72
APOE-205ENST00000485628 MAPKAPK5-AS1Q8N8E1 139 aa10.53□□□□□ -0.72
APOE-205ENST00000485628 TRAV13-1A0A0B4J241 112 aa10.52□□□□□ -0.73
APOE-205ENST00000485628 CRPP02741 224 aa10.52□□□□□ -0.73
APOE-205ENST00000485628 NFE4Q86UQ8 179 aa10.52□□□□□ -0.73
APOE-205ENST00000485628 CHCHD10Q8WYQ3 142 aaPredicted RBP10.52□□□□□ -0.73
APOE-205ENST00000485628 FRAS1Q86XX4 4008 aa10.51□□□□□ -0.73
APOE-205ENST00000485628 DNAH17Q9UFH2 4485 aa10.51□□□□□ -0.73
APOE-205ENST00000485628 IGLV4-69A0A075B6H9 119 aa10.51□□□□□ -0.73
APOE-205ENST00000485628 IGHV3OR16-9A0A0B4J2B5 98 aa10.51□□□□□ -0.73
APOE-205ENST00000485628 COX6A2Q02221 97 aa10.51□□□□□ -0.73
APOE-205ENST00000485628 FOXI1Q12951 378 aa10.51□□□□□ -0.73
APOE-205ENST00000485628 SS18Q15532 418 aa10.51□□□□□ -0.73
APOE-205ENST00000485628 C2orf88Q9BSF0 95 aa10.51□□□□□ -0.73
APOE-205ENST00000485628 IGLV5-45A0A087WSX0 123 aa10.5□□□□□ -0.73
APOE-205ENST00000485628 RTL8CO15255 209 aa10.5□□□□□ -0.73
APOE-205ENST00000485628 PRSS1P07477 247 aa10.5□□□□□ -0.73
APOE-205ENST00000485628 ODF1Q14990 250 aa10.5□□□□□ -0.73
APOE-205ENST00000485628 C1orf134Q5TEV5 83 aa10.5□□□□□ -0.73
APOE-205ENST00000485628 CD164L2Q6UWJ8 174 aa10.5□□□□□ -0.73
APOE-205ENST00000485628 Q9HAA7 133 aa10.5□□□□□ -0.73
APOE-205ENST00000485628 COX11Q9Y6N1 276 aa10.5□□□□□ -0.73
APOE-205ENST00000485628 IGLV10-54A0A075B6I4 117 aa10.49□□□□□ -0.73
APOE-205ENST00000485628 IGKV3OR2-268A0A0C4DH90 116 aa10.49□□□□□ -0.73
APOE-205ENST00000485628 TINCRA0A1B0GVN0 87 aa10.49□□□□□ -0.73
APOE-205ENST00000485628 SYS1-DBNDD2H3BUS1 97 aa10.49□□□□□ -0.73
APOE-205ENST00000485628 C3orf79P0CE67 100 aa10.49□□□□□ -0.73
APOE-205ENST00000485628 IGLC3P0DOY3 106 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 145 ms