RNA–Protein interactions for RNA: ENST00000485513.1

HLA-F-227, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-227ENST00000485513 IGKV2-24A0A0C4DH68 120 aa16.23■□□□□ 0.19
HLA-F-227ENST00000485513 LINC00959A0A1B0GUT2 108 aa16.23■□□□□ 0.19
HLA-F-227ENST00000485513 ZNF727A8MUV8 499 aa16.23■□□□□ 0.19
HLA-F-227ENST00000485513 OSTCQ9NRP0 149 aa16.23■□□□□ 0.19
HLA-F-227ENST00000485513 PHOX2AO14813 284 aa16.22■□□□□ 0.19
HLA-F-227ENST00000485513 CCL25O15444 150 aa16.22■□□□□ 0.19
HLA-F-227ENST00000485513 RAB4AP20338 218 aa16.22■□□□□ 0.19
HLA-F-227ENST00000485513 POLR2KP53803 58 aaKnown RBP16.22■□□□□ 0.19
HLA-F-227ENST00000485513 AMN1Q8IY45 258 aa16.21■□□□□ 0.19
HLA-F-227ENST00000485513 TRBV27A0A0K0K1C4 114 aa16.2■□□□□ 0.18
HLA-F-227ENST00000485513 MT1HL1P0DM35 61 aa16.2■□□□□ 0.18
HLA-F-227ENST00000485513 MRPL52Q86TS9 123 aaKnown RBP16.2■□□□□ 0.18
HLA-F-227ENST00000485513 IGHV1-58A0A0C4DH39 117 aa16.19■□□□□ 0.18
HLA-F-227ENST00000485513 SRP19P09132 144 aaKnown RBP16.19■□□□□ 0.18
HLA-F-227ENST00000485513 SS18Q15532 418 aa16.19■□□□□ 0.18
HLA-F-227ENST00000485513 STPG4Q8N801 248 aa16.19■□□□□ 0.18
HLA-F-227ENST00000485513 CDC42SE2Q9NRR3 84 aa16.19■□□□□ 0.18
HLA-F-227ENST00000485513 C7orf77A4D0Y5 90 aa16.18■□□□□ 0.18
HLA-F-227ENST00000485513 A0A096LNI7 61 aa16.17■□□□□ 0.18
HLA-F-227ENST00000485513 RIGQ13278 110 aa16.17■□□□□ 0.18
HLA-F-227ENST00000485513 ZNF664Q8N3J9 261 aa16.17■□□□□ 0.18
HLA-F-227ENST00000485513 V9GYV3 84 aa16.17■□□□□ 0.18
HLA-F-227ENST00000485513 LINC00526Q96FQ7 95 aa16.16■□□□□ 0.18
HLA-F-227ENST00000485513 PKIGQ9Y2B9 76 aa16.16■□□□□ 0.18
HLA-F-227ENST00000485513 SMKR1H3BMG3 65 aa16.15■□□□□ 0.18
HLA-F-227ENST00000485513 CD164L2Q6UWJ8 174 aa16.15■□□□□ 0.18
HLA-F-227ENST00000485513 NUP35Q8NFH5 326 aa16.15■□□□□ 0.18
HLA-F-227ENST00000485513 VCYO14598 125 aa16.14■□□□□ 0.17
HLA-F-227ENST00000485513 FCER1GP30273 86 aa16.14■□□□□ 0.17
HLA-F-227ENST00000485513 CARD19Q96LW7 228 aa16.14■□□□□ 0.17
HLA-F-227ENST00000485513 LINC00474Q9P2X8 69 aa16.14■□□□□ 0.17
HLA-F-227ENST00000485513 PPP1R17O96001 155 aa16.13■□□□□ 0.17
HLA-F-227ENST00000485513 ISOC2Q96AB3 205 aa16.13■□□□□ 0.17
HLA-F-227ENST00000485513 ZNF561-AS1K7EIQ3 104 aa16.12■□□□□ 0.17
HLA-F-227ENST00000485513 TMEM241Q24JQ0 296 aa16.12■□□□□ 0.17
HLA-F-227ENST00000485513 SUMO2P61956 95 aaKnown RBP16.11■□□□□ 0.17
HLA-F-227ENST00000485513 PRR3P79522 188 aaKnown RBP16.11■□□□□ 0.17
HLA-F-227ENST00000485513 NRACQ8N912 160 aa16.11■□□□□ 0.17
HLA-F-227ENST00000485513 NAT8BQ9UHF3 227 aa16.11■□□□□ 0.17
HLA-F-227ENST00000485513 SYCNQ0VAF6 134 aa16.1■□□□□ 0.17
HLA-F-227ENST00000485513 SMAGPQ0VAQ4 97 aa16.1■□□□□ 0.17
HLA-F-227ENST00000485513 FAM74A3Q4VXF1 159 aa16.1■□□□□ 0.17
HLA-F-227ENST00000485513 KIR2DL4Q99706 377 aa16.1■□□□□ 0.17
HLA-F-227ENST00000485513 C1orf196B1AJZ1 125 aa16.09■□□□□ 0.17
HLA-F-227ENST00000485513 RPL23P62829 140 aaKnown RBP16.09■□□□□ 0.17
HLA-F-227ENST00000485513 CSDC2Q9Y534 153 aaKnown RBP16.09■□□□□ 0.17
HLA-F-227ENST00000485513 UBE2D4Q9Y2X8 147 aa16.08■□□□□ 0.16
HLA-F-227ENST00000485513 PPP1R2P9O14990 202 aa16.07■□□□□ 0.16
HLA-F-227ENST00000485513 MALP21145 153 aa16.07■□□□□ 0.16
HLA-F-227ENST00000485513 CAMPP49913 170 aa16.07■□□□□ 0.16
HLA-F-227ENST00000485513 ADIRFQ15847 76 aa16.07■□□□□ 0.16
HLA-F-227ENST00000485513 UBR4Q5T4S7 5183 aa16.06■□□□□ 0.16
HLA-F-227ENST00000485513 COX7A2LO14548 114 aa16.06■□□□□ 0.16
HLA-F-227ENST00000485513 MRPL51Q4U2R6 128 aaKnown RBP16.06■□□□□ 0.16
HLA-F-227ENST00000485513 FAM104BQ5XKR9 115 aa16.06■□□□□ 0.16
HLA-F-227ENST00000485513 RNASE13Q5GAN3 156 aaKnown RBP16.05■□□□□ 0.16
HLA-F-227ENST00000485513 IGLV4-69A0A075B6H9 119 aa16.04■□□□□ 0.16
HLA-F-227ENST00000485513 NAT8Q9UHE5 227 aa16.04■□□□□ 0.16
HLA-F-227ENST00000485513 TRAV13-1A0A0B4J241 112 aa16.03■□□□□ 0.16
HLA-F-227ENST00000485513 SMIM27A0A1W2PRY6 76 aa16.03■□□□□ 0.16
HLA-F-227ENST00000485513 C9JQL5 133 aa16.03■□□□□ 0.16
HLA-F-227ENST00000485513 TMEM18Q96B42 140 aa16.03■□□□□ 0.16
HLA-F-227ENST00000485513 LINC00862A6NCI5 91 aa16.02■□□□□ 0.16
HLA-F-227ENST00000485513 Q6ZUT4 128 aa16.02■□□□□ 0.16
HLA-F-227ENST00000485513 LOC107984640A0A0U1RRK4 108 aa16.01■□□□□ 0.15
HLA-F-227ENST00000485513 PTTG1IPP53801 180 aa16.01■□□□□ 0.15
HLA-F-227ENST00000485513 LINC01600Q96MT4 127 aa16.01■□□□□ 0.15
HLA-F-227ENST00000485513 C20orf78Q9BR46 151 aa16.01■□□□□ 0.15
HLA-F-227ENST00000485513 TIMM21Q9BVV7 248 aa16.01■□□□□ 0.15
HLA-F-227ENST00000485513 A0A1B0GW15 77 aa16■□□□□ 0.15
HLA-F-227ENST00000485513 CKS2P33552 79 aa16■□□□□ 0.15
HLA-F-227ENST00000485513 TRBV24-1A0A075B6N3 115 aa15.99■□□□□ 0.15
HLA-F-227ENST00000485513 GAGE2BQ13066 116 aa15.99■□□□□ 0.15
HLA-F-227ENST00000485513 PEA15Q15121 130 aa15.99■□□□□ 0.15
HLA-F-227ENST00000485513 C5orf38Q86SI9 138 aa15.99■□□□□ 0.15
HLA-F-227ENST00000485513 CAMK2N2Q96S95 79 aa15.99■□□□□ 0.15
HLA-F-227ENST00000485513 RPL32P62910 135 aaKnown RBP15.98■□□□□ 0.15
HLA-F-227ENST00000485513 TCAPO15273 167 aa15.97■□□□□ 0.15
HLA-F-227ENST00000485513 APOMO95445 188 aa15.97■□□□□ 0.15
HLA-F-227ENST00000485513 SRSF3P84103 164 aaKnown RBP15.97■□□□□ 0.15
HLA-F-227ENST00000485513 SPINK6Q6UWN8 80 aa15.97■□□□□ 0.15
HLA-F-227ENST00000485513 Q6ZRP5 223 aa15.97■□□□□ 0.15
HLA-F-227ENST00000485513 C2orf48Q96LS8 159 aa15.97■□□□□ 0.15
HLA-F-227ENST00000485513 TNXBP22105 4242 aa15.96■□□□□ 0.15
HLA-F-227ENST00000485513 A0A1B0GVG6 124 aa15.96■□□□□ 0.15
HLA-F-227ENST00000485513 TNFRSF6BO95407 300 aa15.96■□□□□ 0.15
HLA-F-227ENST00000485513 RPL39P62891 51 aaKnown RBP15.95■□□□□ 0.14
HLA-F-227ENST00000485513 S100A8P05109 93 aa15.94■□□□□ 0.14
HLA-F-227ENST00000485513 HBBP68871 147 aa15.94■□□□□ 0.14
HLA-F-227ENST00000485513 MRPL54Q6P161 138 aaKnown RBP15.94■□□□□ 0.14
HLA-F-227ENST00000485513 SMIM2Q9BVW6 85 aa15.94■□□□□ 0.14
HLA-F-227ENST00000485513 SMDT1Q9H4I9 107 aa15.94■□□□□ 0.14
HLA-F-227ENST00000485513 D6R8Y8 96 aa15.93■□□□□ 0.14
HLA-F-227ENST00000485513 F8W036 122 aa15.93■□□□□ 0.14
HLA-F-227ENST00000485513 SPAG11BQ08648 103 aa15.93■□□□□ 0.14
HLA-F-227ENST00000485513 REG3GQ6UW15 175 aa15.93■□□□□ 0.14
HLA-F-227ENST00000485513 A0A1W2PNN7 141 aa15.92■□□□□ 0.14
HLA-F-227ENST00000485513 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.92■□□□□ 0.14
HLA-F-227ENST00000485513 A0A0J9YXV3 536 aa15.91■□□□□ 0.14
HLA-F-227ENST00000485513 SRSF9Q13242 221 aaKnown RBP eCLIP15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms