RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 TRAV26-2A0A0B4J265 109 aa7.79□□□□□ -1.16
DDX56-212ENST00000485367 DEFB131AP59861 70 aa7.79□□□□□ -1.16
DDX56-212ENST00000485367 TTC32Q5I0X7 151 aa7.79□□□□□ -1.16
DDX56-212ENST00000485367 IGFL4Q6B9Z1 124 aa7.79□□□□□ -1.16
DDX56-212ENST00000485367 C2orf66Q6UXQ4 117 aa7.79□□□□□ -1.16
DDX56-212ENST00000485367 LINC01600Q96MT4 127 aa7.79□□□□□ -1.16
DDX56-212ENST00000485367 TRAV2A0A0B4J234 112 aa7.78□□□□□ -1.16
DDX56-212ENST00000485367 MRPL23Q16540 153 aaKnown RBP7.78□□□□□ -1.16
DDX56-212ENST00000485367 C10orf126Q8N4M7 172 aa7.78□□□□□ -1.16
DDX56-212ENST00000485367 POM121L12Q8N7R1 296 aa7.78□□□□□ -1.16
DDX56-212ENST00000485367 RASL10AQ92737 203 aa7.78□□□□□ -1.16
DDX56-212ENST00000485367 SPANXDQ9BXN6 97 aa7.78□□□□□ -1.16
DDX56-212ENST00000485367 DNAH1Q9P2D7 4330 aa7.78□□□□□ -1.16
DDX56-212ENST00000485367 LYSTQ99698 3801 aa7.78□□□□□ -1.16
DDX56-212ENST00000485367 A0A0J9YY99 117 aa7.77□□□□□ -1.17
DDX56-212ENST00000485367 SNCGO76070 127 aa7.77□□□□□ -1.17
DDX56-212ENST00000485367 OR10J6PQ8NGY7 276 aa7.77□□□□□ -1.17
DDX56-212ENST00000485367 GLMPQ8WWB7 406 aa7.77□□□□□ -1.17
DDX56-212ENST00000485367 TMEM141Q96I45 108 aa7.77□□□□□ -1.17
DDX56-212ENST00000485367 K7EQG2 157 aa7.76□□□□□ -1.17
DDX56-212ENST00000485367 TCL1BO95988 128 aa7.76□□□□□ -1.17
DDX56-212ENST00000485367 ZFP2Q6ZN57 461 aa7.76□□□□□ -1.17
DDX56-212ENST00000485367 RNF182Q8N6D2 247 aa7.76□□□□□ -1.17
DDX56-212ENST00000485367 SLC25A29Q8N8R3 303 aa7.76□□□□□ -1.17
DDX56-212ENST00000485367 PPDPFQ9H3Y8 114 aa7.76□□□□□ -1.17
DDX56-212ENST00000485367 U3KQE9 123 aa7.76□□□□□ -1.17
DDX56-212ENST00000485367 TRAV8-2A0A0B4J237 113 aa7.76□□□□□ -1.17
DDX56-212ENST00000485367 TRAV21A0A0B4J279 112 aa7.76□□□□□ -1.17
DDX56-212ENST00000485367 C11orf86A6NJI1 115 aa7.76□□□□□ -1.17
DDX56-212ENST00000485367 H3BVH4 76 aa7.76□□□□□ -1.17
DDX56-212ENST00000485367 IGHV3-30P01768 117 aa7.76□□□□□ -1.17
DDX56-212ENST00000485367 IGHV3-30-5P0DP03 117 aa7.76□□□□□ -1.17
DDX56-212ENST00000485367 PLEKHB2Q96CS7 222 aa7.76□□□□□ -1.17
DDX56-212ENST00000485367 LINC00477Q96M19 166 aa7.76□□□□□ -1.17
DDX56-212ENST00000485367 PRO1854Q9UHT4 67 aa7.76□□□□□ -1.17
DDX56-212ENST00000485367 SCGB1C2P0DMR2 95 aa7.75□□□□□ -1.17
DDX56-212ENST00000485367 P0DMU3 169 aa7.75□□□□□ -1.17
DDX56-212ENST00000485367 FAM231AP0DMU4 169 aa7.75□□□□□ -1.17
DDX56-212ENST00000485367 FAM231CP0DMU5 169 aa7.75□□□□□ -1.17
DDX56-212ENST00000485367 PMVKQ15126 192 aa7.75□□□□□ -1.17
DDX56-212ENST00000485367 STHQ8IWL8 128 aa7.75□□□□□ -1.17
DDX56-212ENST00000485367 TIMM17AQ99595 171 aa7.75□□□□□ -1.17
DDX56-212ENST00000485367 ALMS1Q8TCU4 4167 aa7.75□□□□□ -1.17
DDX56-212ENST00000485367 A0A1B0GX51 115 aa7.74□□□□□ -1.17
DDX56-212ENST00000485367 KNCNA6PVL3 124 aa7.74□□□□□ -1.17
DDX56-212ENST00000485367 CFC1BP0CG36 223 aa7.74□□□□□ -1.17
DDX56-212ENST00000485367 CFC1P0CG37 223 aa7.74□□□□□ -1.17
DDX56-212ENST00000485367 MEIG1Q5JSS6 88 aa7.74□□□□□ -1.17
DDX56-212ENST00000485367 ANKRD29Q8N6D5 301 aa7.74□□□□□ -1.17
DDX56-212ENST00000485367 DCANP1Q8TF63 244 aa7.74□□□□□ -1.17
DDX56-212ENST00000485367 PLECQ15149 4684 aaKnown RBP7.74□□□□□ -1.17
DDX56-212ENST00000485367 IGLV4-69A0A075B6H9 119 aa7.74□□□□□ -1.17
DDX56-212ENST00000485367 A0A0B4J2C4 111 aa7.74□□□□□ -1.17
DDX56-212ENST00000485367 SMIM9A6NGZ8 99 aa7.74□□□□□ -1.17
DDX56-212ENST00000485367 CRYGDP07320 174 aa7.74□□□□□ -1.17
DDX56-212ENST00000485367 FAM159AQ6UWV7 190 aa7.74□□□□□ -1.17
DDX56-212ENST00000485367 IGIPA6NJ69 53 aa7.73□□□□□ -1.17
DDX56-212ENST00000485367 SLC25A20O43772 301 aa7.73□□□□□ -1.17
DDX56-212ENST00000485367 NXPH4O95158 308 aa7.73□□□□□ -1.17
DDX56-212ENST00000485367 S100A4P26447 101 aaKnown RBP7.73□□□□□ -1.17
DDX56-212ENST00000485367 TRPT1Q86TN4 253 aaKnown RBP7.73□□□□□ -1.17
DDX56-212ENST00000485367 PHLDA3Q9Y5J5 127 aa7.73□□□□□ -1.17
DDX56-212ENST00000485367 NUPR2A6NF83 97 aa7.72□□□□□ -1.17
DDX56-212ENST00000485367 CEMP1Q6PRD7 247 aaPredicted RBP7.72□□□□□ -1.17
DDX56-212ENST00000485367 RPL39LQ96EH5 51 aaKnown RBP7.72□□□□□ -1.17
DDX56-212ENST00000485367 LINC01587Q99440 93 aa7.72□□□□□ -1.17
DDX56-212ENST00000485367 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.71□□□□□ -1.17
DDX56-212ENST00000485367 DEFB4AO15263 64 aa7.71□□□□□ -1.17
DDX56-212ENST00000485367 RPL13AP40429 203 aaKnown RBP7.71□□□□□ -1.17
DDX56-212ENST00000485367 SNRPD3P62318 126 aaKnown RBP7.71□□□□□ -1.17
DDX56-212ENST00000485367 RPS28P62857 69 aaKnown RBP7.71□□□□□ -1.17
DDX56-212ENST00000485367 C16orf92Q96LL3 132 aa7.71□□□□□ -1.17
DDX56-212ENST00000485367 KIR2DL4Q99706 377 aa7.71□□□□□ -1.17
DDX56-212ENST00000485367 TRAV4A0A0B4J268 109 aa7.71□□□□□ -1.18
DDX56-212ENST00000485367 A0A0J9YX75 114 aa7.71□□□□□ -1.18
DDX56-212ENST00000485367 VCYO14598 125 aa7.71□□□□□ -1.18
DDX56-212ENST00000485367 GIG44P09565 113 aaPredicted RBP7.71□□□□□ -1.18
DDX56-212ENST00000485367 LGALS3P17931 250 aaKnown RBP7.71□□□□□ -1.18
DDX56-212ENST00000485367 ATXN8Q156A1 80 aa7.71□□□□□ -1.18
DDX56-212ENST00000485367 ZNF876PQ49A33 203 aa7.71□□□□□ -1.18
DDX56-212ENST00000485367 ZFAND2AQ8N6M9 145 aa7.71□□□□□ -1.18
DDX56-212ENST00000485367 C14orf178Q8N769 122 aaPredicted RBP7.71□□□□□ -1.18
DDX56-212ENST00000485367 KLK5Q9Y337 293 aaPredicted RBP7.71□□□□□ -1.18
DDX56-212ENST00000485367 J3QQQ9 107 aa7.7□□□□□ -1.18
DDX56-212ENST00000485367 DUSP14O95147 198 aaKnown RBP7.7□□□□□ -1.18
DDX56-212ENST00000485367 TSHBP01222 138 aa7.7□□□□□ -1.18
DDX56-212ENST00000485367 IGHV3-33P01772 117 aa7.7□□□□□ -1.18
DDX56-212ENST00000485367 MGPP08493 103 aa7.7□□□□□ -1.18
DDX56-212ENST00000485367 POLR2KP53803 58 aaKnown RBP7.7□□□□□ -1.18
DDX56-212ENST00000485367 NANOS2P60321 138 aaKnown RBP7.7□□□□□ -1.18
DDX56-212ENST00000485367 C11orf45Q8TAV5 145 aa7.7□□□□□ -1.18
DDX56-212ENST00000485367 FAM19A4Q96LR4 140 aa7.7□□□□□ -1.18
DDX56-212ENST00000485367 HYDINQ4G0P3 5121 aa7.69□□□□□ -1.18
DDX56-212ENST00000485367 TRBV6-5A0A0K0K1A5 114 aa7.69□□□□□ -1.18
DDX56-212ENST00000485367 LEPROTO15243 131 aa7.69□□□□□ -1.18
DDX56-212ENST00000485367 PRR9Q5T870 116 aa7.69□□□□□ -1.18
DDX56-212ENST00000485367 TMEM263Q8WUH6 116 aaKnown RBP7.69□□□□□ -1.18
DDX56-212ENST00000485367 AMELXQ99217 191 aa7.69□□□□□ -1.18
DDX56-212ENST00000485367 C11orf68Q9H3H3 251 aaKnown RBP7.69□□□□□ -1.18
DDX56-212ENST00000485367 SDHAF1A6NFY7 115 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms