RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 CIRBP-AS1Q8TBR5 109 aa7.93□□□□□ -1.14
MSH5-216ENST00000484309 CHAC1Q9BUX1 264 aa7.93□□□□□ -1.14
MSH5-216ENST00000484309 PPP1R2P9O14990 202 aa7.92□□□□□ -1.14
MSH5-216ENST00000484309 TNFRSF6BO95407 300 aa7.92□□□□□ -1.14
MSH5-216ENST00000484309 PPP1R17O96001 155 aa7.92□□□□□ -1.14
MSH5-216ENST00000484309 S100A8P05109 93 aa7.92□□□□□ -1.14
MSH5-216ENST00000484309 XCL1P47992 114 aa7.92□□□□□ -1.14
MSH5-216ENST00000484309 IFITM2Q01629 132 aa7.92□□□□□ -1.14
MSH5-216ENST00000484309 RNASE13Q5GAN3 156 aaKnown RBP7.92□□□□□ -1.14
MSH5-216ENST00000484309 DGAT2L7PQ6IED9 249 aa7.92□□□□□ -1.14
MSH5-216ENST00000484309 C9orf163Q8N9P6 203 aa7.92□□□□□ -1.14
MSH5-216ENST00000484309 KIR2DL4Q99706 377 aa7.92□□□□□ -1.14
MSH5-216ENST00000484309 AP5S1Q9NUS5 200 aa7.92□□□□□ -1.14
MSH5-216ENST00000484309 LINC00959A0A1B0GUT2 108 aa7.91□□□□□ -1.14
MSH5-216ENST00000484309 F8W036 122 aa7.91□□□□□ -1.14
MSH5-216ENST00000484309 CCL25O15444 150 aa7.91□□□□□ -1.14
MSH5-216ENST00000484309 NPYP01303 97 aa7.91□□□□□ -1.14
MSH5-216ENST00000484309 SLPIP03973 132 aa7.91□□□□□ -1.14
MSH5-216ENST00000484309 MRPL52Q86TS9 123 aaKnown RBP7.91□□□□□ -1.14
MSH5-216ENST00000484309 CDC42SE2Q9NRR3 84 aa7.91□□□□□ -1.14
MSH5-216ENST00000484309 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.91□□□□□ -1.14
MSH5-216ENST00000484309 LINC00862A6NCI5 91 aa7.9□□□□□ -1.14
MSH5-216ENST00000484309 PANO1I0J062 215 aa7.9□□□□□ -1.14
MSH5-216ENST00000484309 CNBPP62633 177 aaKnown RBP7.9□□□□□ -1.14
MSH5-216ENST00000484309 PNRC1Q12796 327 aaPredicted RBP7.9□□□□□ -1.14
MSH5-216ENST00000484309 FOXI1Q12951 378 aa7.9□□□□□ -1.14
MSH5-216ENST00000484309 ZNF664Q8N3J9 261 aa7.9□□□□□ -1.14
MSH5-216ENST00000484309 SMIM2Q9BVW6 85 aa7.9□□□□□ -1.14
MSH5-216ENST00000484309 TRBV24-1A0A075B6N3 115 aa7.89□□□□□ -1.15
MSH5-216ENST00000484309 MT-ND4LP03901 98 aa7.89□□□□□ -1.15
MSH5-216ENST00000484309 RPL39P62891 51 aaKnown RBP7.89□□□□□ -1.15
MSH5-216ENST00000484309 Q6ZUT4 128 aa7.89□□□□□ -1.15
MSH5-216ENST00000484309 ATP5L2Q7Z4Y8 100 aa7.89□□□□□ -1.15
MSH5-216ENST00000484309 ANAPC16Q96DE5 110 aa7.89□□□□□ -1.15
MSH5-216ENST00000484309 C20orf78Q9BR46 151 aa7.89□□□□□ -1.15
MSH5-216ENST00000484309 UBE2D4Q9Y2X8 147 aa7.89□□□□□ -1.15
MSH5-216ENST00000484309 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.88□□□□□ -1.15
MSH5-216ENST00000484309 TCAPO15273 167 aa7.88□□□□□ -1.15
MSH5-216ENST00000484309 PLA2G1BP04054 148 aaKnown RBP7.88□□□□□ -1.15
MSH5-216ENST00000484309 CHTF8P0CG12 524 aa7.88□□□□□ -1.15
MSH5-216ENST00000484309 ADCYAP1P18509 176 aa7.88□□□□□ -1.15
MSH5-216ENST00000484309 SS18Q15532 418 aa7.88□□□□□ -1.15
MSH5-216ENST00000484309 CFAP161Q6P656 301 aa7.88□□□□□ -1.15
MSH5-216ENST00000484309 SDIM1Q6ZPB5 146 aa7.88□□□□□ -1.15
MSH5-216ENST00000484309 LINC00526Q96FQ7 95 aa7.88□□□□□ -1.15
MSH5-216ENST00000484309 IGHV3-64A0A075B6Q5 118 aa7.87□□□□□ -1.15
MSH5-216ENST00000484309 RPL32P62910 135 aaKnown RBP7.87□□□□□ -1.15
MSH5-216ENST00000484309 TMEM136Q6ZRR5 245 aa7.87□□□□□ -1.15
MSH5-216ENST00000484309 ORMDL3Q8N138 153 aa7.87□□□□□ -1.15
MSH5-216ENST00000484309 PRELID3AQ96N28 172 aa7.87□□□□□ -1.15
MSH5-216ENST00000484309 DMBT1Q9UGM3 2413 aaPredicted RBP7.86□□□□□ -1.15
MSH5-216ENST00000484309 GVQW2A0A096LPI5 108 aaPredicted RBP7.86□□□□□ -1.15
MSH5-216ENST00000484309 TRAV13-1A0A0B4J241 112 aa7.86□□□□□ -1.15
MSH5-216ENST00000484309 PPBPP02775 128 aa7.86□□□□□ -1.15
MSH5-216ENST00000484309 TMEM18Q96B42 140 aa7.86□□□□□ -1.15
MSH5-216ENST00000484309 LOC389332A0A1B0GUA5 103 aa7.85□□□□□ -1.15
MSH5-216ENST00000484309 PHOX2AO14813 284 aa7.85□□□□□ -1.15
MSH5-216ENST00000484309 SMAGPQ0VAQ4 97 aa7.85□□□□□ -1.15
MSH5-216ENST00000484309 CD164L2Q6UWJ8 174 aa7.85□□□□□ -1.15
MSH5-216ENST00000484309 OPRPNQ99935 248 aaPredicted RBP7.85□□□□□ -1.15
MSH5-216ENST00000484309 CSDC2Q9Y534 153 aaKnown RBP7.85□□□□□ -1.15
MSH5-216ENST00000484309 MYCBP2O75592 4640 aa7.84□□□□□ -1.15
MSH5-216ENST00000484309 IGHV1-58A0A0C4DH39 117 aa7.84□□□□□ -1.15
MSH5-216ENST00000484309 TMEM218A2RU14 115 aa7.84□□□□□ -1.15
MSH5-216ENST00000484309 COX6A2Q02221 97 aa7.84□□□□□ -1.15
MSH5-216ENST00000484309 UQCC3Q6UW78 93 aa7.84□□□□□ -1.15
MSH5-216ENST00000484309 COMMD7Q86VX2 200 aa7.84□□□□□ -1.15
MSH5-216ENST00000484309 DPH3Q96FX2 82 aa7.84□□□□□ -1.15
MSH5-216ENST00000484309 TIMM21Q9BVV7 248 aa7.84□□□□□ -1.15
MSH5-216ENST00000484309 IGKV2-24A0A0C4DH68 120 aa7.83□□□□□ -1.16
MSH5-216ENST00000484309 C1orf196B1AJZ1 125 aa7.83□□□□□ -1.16
MSH5-216ENST00000484309 KRTAP10-4P60372 401 aaPredicted RBP7.83□□□□□ -1.16
MSH5-216ENST00000484309 PRSS3P2Q8NHM4 247 aa7.83□□□□□ -1.16
MSH5-216ENST00000484309 FAM104AQ969W3 186 aa7.83□□□□□ -1.16
MSH5-216ENST00000484309 RAB5AP20339 215 aa7.82□□□□□ -1.16
MSH5-216ENST00000484309 MALP21145 153 aa7.82□□□□□ -1.16
MSH5-216ENST00000484309 RPL37AP61513 92 aaKnown RBP7.82□□□□□ -1.16
MSH5-216ENST00000484309 CIRBPQ14011 172 aaKnown RBP7.82□□□□□ -1.16
MSH5-216ENST00000484309 C5orf38Q86SI9 138 aa7.82□□□□□ -1.16
MSH5-216ENST00000484309 SPACA4Q8TDM5 124 aa7.82□□□□□ -1.16
MSH5-216ENST00000484309 MAP1LC3AQ9H492 121 aa7.82□□□□□ -1.16
MSH5-216ENST00000484309 SPANXA1Q9NS26 97 aa7.82□□□□□ -1.16
MSH5-216ENST00000484309 A0A087WYN8 130 aa7.81□□□□□ -1.16
MSH5-216ENST00000484309 ZNF561-AS1K7EIQ3 104 aa7.81□□□□□ -1.16
MSH5-216ENST00000484309 COX7A2LO14548 114 aa7.81□□□□□ -1.16
MSH5-216ENST00000484309 CARD19Q96LW7 228 aa7.81□□□□□ -1.16
MSH5-216ENST00000484309 IGLV4-69A0A075B6H9 119 aa7.8□□□□□ -1.16
MSH5-216ENST00000484309 A0A096LNI7 61 aa7.8□□□□□ -1.16
MSH5-216ENST00000484309 IFITM10A6NMD0 228 aa7.8□□□□□ -1.16
MSH5-216ENST00000484309 MAJINQ3KP22 176 aa7.8□□□□□ -1.16
MSH5-216ENST00000484309 KIAA1644Q3SXP7 199 aa7.8□□□□□ -1.16
MSH5-216ENST00000484309 SEC11CQ9BY50 192 aa7.8□□□□□ -1.16
MSH5-216ENST00000484309 CTDSP1Q9GZU7 261 aa7.8□□□□□ -1.16
MSH5-216ENST00000484309 LAMTOR2Q9Y2Q5 125 aa7.8□□□□□ -1.16
MSH5-216ENST00000484309 PKHD1L1Q86WI1 4243 aa7.79□□□□□ -1.16
MSH5-216ENST00000484309 IFI27P40305 119 aaPredicted RBP7.79□□□□□ -1.16
MSH5-216ENST00000484309 SYCNQ0VAF6 134 aa7.79□□□□□ -1.16
MSH5-216ENST00000484309 Q8N8P6 123 aa7.79□□□□□ -1.16
MSH5-216ENST00000484309 IMMP2LQ96T52 175 aa7.79□□□□□ -1.16
MSH5-216ENST00000484309 PRSS47A8MTI9 375 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms