RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 FLG2Q5D862 2391 aaPredicted RBP8.32□□□□□ -1.08
HDAC1-209ENST00000484305 A0A1B0GXF2 115 aa8.31□□□□□ -1.08
HDAC1-209ENST00000484305 C7orf77A4D0Y5 90 aa8.31□□□□□ -1.08
HDAC1-209ENST00000484305 SLPIP03973 132 aa8.31□□□□□ -1.08
HDAC1-209ENST00000484305 CNBPP62633 177 aaKnown RBP8.31□□□□□ -1.08
HDAC1-209ENST00000484305 HBBP68871 147 aa8.31□□□□□ -1.08
HDAC1-209ENST00000484305 C15orf56Q8N910 161 aa8.31□□□□□ -1.08
HDAC1-209ENST00000484305 LINC00862A6NCI5 91 aa8.3□□□□□ -1.08
HDAC1-209ENST00000484305 FCER1GP30273 86 aa8.3□□□□□ -1.08
HDAC1-209ENST00000484305 CKS2P33552 79 aa8.3□□□□□ -1.08
HDAC1-209ENST00000484305 SDIM1Q6ZPB5 146 aa8.3□□□□□ -1.08
HDAC1-209ENST00000484305 MRPL52Q86TS9 123 aaKnown RBP8.3□□□□□ -1.08
HDAC1-209ENST00000484305 CDC42SE2Q9NRR3 84 aa8.3□□□□□ -1.08
HDAC1-209ENST00000484305 TRBV24-1A0A075B6N3 115 aa8.29□□□□□ -1.08
HDAC1-209ENST00000484305 LINC00959A0A1B0GUT2 108 aa8.29□□□□□ -1.08
HDAC1-209ENST00000484305 D6R8Y8 96 aa8.29□□□□□ -1.08
HDAC1-209ENST00000484305 PANO1I0J062 215 aa8.29□□□□□ -1.08
HDAC1-209ENST00000484305 PPP1R2P9O14990 202 aa8.29□□□□□ -1.08
HDAC1-209ENST00000484305 TNFRSF6BO95407 300 aa8.29□□□□□ -1.08
HDAC1-209ENST00000484305 PLA2G1BP04054 148 aaKnown RBP8.29□□□□□ -1.08
HDAC1-209ENST00000484305 S100A8P05109 93 aa8.29□□□□□ -1.08
HDAC1-209ENST00000484305 FOXI1Q12951 378 aa8.29□□□□□ -1.08
HDAC1-209ENST00000484305 ZNF664Q8N3J9 261 aa8.29□□□□□ -1.08
HDAC1-209ENST00000484305 KIR2DL4Q99706 377 aa8.29□□□□□ -1.08
HDAC1-209ENST00000484305 C20orf78Q9BR46 151 aa8.29□□□□□ -1.08
HDAC1-209ENST00000484305 AP5S1Q9NUS5 200 aa8.29□□□□□ -1.08
HDAC1-209ENST00000484305 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.29□□□□□ -1.08
HDAC1-209ENST00000484305 F8W036 122 aa8.28□□□□□ -1.08
HDAC1-209ENST00000484305 CCL25O15444 150 aa8.28□□□□□ -1.08
HDAC1-209ENST00000484305 XCL1P47992 114 aa8.28□□□□□ -1.08
HDAC1-209ENST00000484305 HIGD2BQ4VC39 106 aa8.28□□□□□ -1.08
HDAC1-209ENST00000484305 CLLU1Q5K131 121 aa8.28□□□□□ -1.08
HDAC1-209ENST00000484305 LCE2CQ5TA81 110 aa8.28□□□□□ -1.08
HDAC1-209ENST00000484305 CFAP161Q6P656 301 aa8.28□□□□□ -1.08
HDAC1-209ENST00000484305 RPL32P62910 135 aaKnown RBP8.27□□□□□ -1.09
HDAC1-209ENST00000484305 IFITM2Q01629 132 aa8.27□□□□□ -1.09
HDAC1-209ENST00000484305 PNRC1Q12796 327 aaPredicted RBP8.27□□□□□ -1.09
HDAC1-209ENST00000484305 UBE2D4Q9Y2X8 147 aa8.27□□□□□ -1.09
HDAC1-209ENST00000484305 IGHV3-64A0A075B6Q5 118 aa8.26□□□□□ -1.09
HDAC1-209ENST00000484305 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.26□□□□□ -1.09
HDAC1-209ENST00000484305 NPYP01303 97 aa8.26□□□□□ -1.09
HDAC1-209ENST00000484305 SS18Q15532 418 aa8.26□□□□□ -1.09
HDAC1-209ENST00000484305 RNASE13Q5GAN3 156 aaKnown RBP8.26□□□□□ -1.09
HDAC1-209ENST00000484305 ATP5L2Q7Z4Y8 100 aa8.26□□□□□ -1.09
HDAC1-209ENST00000484305 ANAPC16Q96DE5 110 aa8.26□□□□□ -1.09
HDAC1-209ENST00000484305 SMIM2Q9BVW6 85 aa8.26□□□□□ -1.09
HDAC1-209ENST00000484305 CSDC2Q9Y534 153 aaKnown RBP8.26□□□□□ -1.09
HDAC1-209ENST00000484305 MYCBP2O75592 4640 aa8.25□□□□□ -1.09
HDAC1-209ENST00000484305 GVQW2A0A096LPI5 108 aaPredicted RBP8.25□□□□□ -1.09
HDAC1-209ENST00000484305 PPBPP02775 128 aa8.25□□□□□ -1.09
HDAC1-209ENST00000484305 MT-ND4LP03901 98 aa8.25□□□□□ -1.09
HDAC1-209ENST00000484305 KRTAP10-4P60372 401 aaPredicted RBP8.25□□□□□ -1.09
HDAC1-209ENST00000484305 PHOX2AO14813 284 aa8.24□□□□□ -1.09
HDAC1-209ENST00000484305 RPL39P62891 51 aaKnown RBP8.24□□□□□ -1.09
HDAC1-209ENST00000484305 SMAGPQ0VAQ4 97 aa8.24□□□□□ -1.09
HDAC1-209ENST00000484305 CIRBPQ14011 172 aaKnown RBP8.24□□□□□ -1.09
HDAC1-209ENST00000484305 CD164L2Q6UWJ8 174 aa8.24□□□□□ -1.09
HDAC1-209ENST00000484305 TMEM18Q96B42 140 aa8.24□□□□□ -1.09
HDAC1-209ENST00000484305 TCAPO15273 167 aa8.23□□□□□ -1.09
HDAC1-209ENST00000484305 CHTF8P0CG12 524 aa8.23□□□□□ -1.09
HDAC1-209ENST00000484305 ADCYAP1P18509 176 aa8.23□□□□□ -1.09
HDAC1-209ENST00000484305 TMEM136Q6ZRR5 245 aa8.23□□□□□ -1.09
HDAC1-209ENST00000484305 Q6ZUT4 128 aa8.23□□□□□ -1.09
HDAC1-209ENST00000484305 ORMDL3Q8N138 153 aa8.23□□□□□ -1.09
HDAC1-209ENST00000484305 PRELID3AQ96N28 172 aa8.23□□□□□ -1.09
HDAC1-209ENST00000484305 TIMM21Q9BVV7 248 aa8.23□□□□□ -1.09
HDAC1-209ENST00000484305 DMBT1Q9UGM3 2413 aaPredicted RBP8.23□□□□□ -1.09
HDAC1-209ENST00000484305 IGHV1-58A0A0C4DH39 117 aa8.22□□□□□ -1.09
HDAC1-209ENST00000484305 C1orf196B1AJZ1 125 aa8.22□□□□□ -1.09
HDAC1-209ENST00000484305 COX6A2Q02221 97 aa8.22□□□□□ -1.09
HDAC1-209ENST00000484305 FAM104AQ969W3 186 aa8.22□□□□□ -1.09
HDAC1-209ENST00000484305 LINC00526Q96FQ7 95 aa8.22□□□□□ -1.09
HDAC1-209ENST00000484305 TRAV13-1A0A0B4J241 112 aa8.21□□□□□ -1.1
HDAC1-209ENST00000484305 UQCC3Q6UW78 93 aa8.21□□□□□ -1.1
HDAC1-209ENST00000484305 PRSS3P2Q8NHM4 247 aa8.21□□□□□ -1.1
HDAC1-209ENST00000484305 SPACA4Q8TDM5 124 aa8.21□□□□□ -1.1
HDAC1-209ENST00000484305 DPH3Q96FX2 82 aa8.21□□□□□ -1.1
HDAC1-209ENST00000484305 OPRPNQ99935 248 aaPredicted RBP8.21□□□□□ -1.1
HDAC1-209ENST00000484305 A0A087WYN8 130 aa8.2□□□□□ -1.1
HDAC1-209ENST00000484305 TMEM218A2RU14 115 aa8.2□□□□□ -1.1
HDAC1-209ENST00000484305 LOC389332A0A1B0GUA5 103 aa8.19□□□□□ -1.1
HDAC1-209ENST00000484305 PRSS47A8MTI9 375 aa8.19□□□□□ -1.1
HDAC1-209ENST00000484305 RAB5AP20339 215 aa8.19□□□□□ -1.1
HDAC1-209ENST00000484305 RPL37AP61513 92 aaKnown RBP8.19□□□□□ -1.1
HDAC1-209ENST00000484305 SPANXA1Q9NS26 97 aa8.19□□□□□ -1.1
HDAC1-209ENST00000484305 HERC1Q15751 4861 aa8.18□□□□□ -1.1
HDAC1-209ENST00000484305 ZNF561-AS1K7EIQ3 104 aa8.18□□□□□ -1.1
HDAC1-209ENST00000484305 COX7A2LO14548 114 aa8.18□□□□□ -1.1
HDAC1-209ENST00000484305 MALP21145 153 aa8.18□□□□□ -1.1
HDAC1-209ENST00000484305 C5orf38Q86SI9 138 aa8.18□□□□□ -1.1
HDAC1-209ENST00000484305 LAMTOR2Q9Y2Q5 125 aa8.18□□□□□ -1.1
HDAC1-209ENST00000484305 A0A096LNI7 61 aa8.17□□□□□ -1.1
HDAC1-209ENST00000484305 IGKV2-24A0A0C4DH68 120 aa8.17□□□□□ -1.1
HDAC1-209ENST00000484305 MRPS36P82909 103 aaKnown RBP8.17□□□□□ -1.1
HDAC1-209ENST00000484305 CARD19Q96LW7 228 aa8.17□□□□□ -1.1
HDAC1-209ENST00000484305 IMMP2LQ96T52 175 aa8.17□□□□□ -1.1
HDAC1-209ENST00000484305 MAP1LC3AQ9H492 121 aa8.17□□□□□ -1.1
HDAC1-209ENST00000484305 IGLV4-69A0A075B6H9 119 aa8.16□□□□□ -1.1
HDAC1-209ENST00000484305 HNRNPA3P51991 378 aaKnown RBP8.16□□□□□ -1.1
HDAC1-209ENST00000484305 SYCNQ0VAF6 134 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms