RNA–Protein interactions for RNA: ENST00000483873.6

GTF3C4-202, Transcript of general transcription factor IIIC subunit 4, humanhuman

TSL 3 BASIC

Gene GTF3C4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-202ENST00000483873 MIAQ16674 131 aa17.52■□□□□ 0.4
GTF3C4-202ENST00000483873 ESDP10768 282 aa17.51■□□□□ 0.39
GTF3C4-202ENST00000483873 REG3AQ06141 175 aa17.51■□□□□ 0.39
GTF3C4-202ENST00000483873 KIR2DL4Q99706 377 aa17.5■□□□□ 0.39
GTF3C4-202ENST00000483873 APOBP04114 4563 aaKnown RBP17.49■□□□□ 0.39
GTF3C4-202ENST00000483873 RAB5AP20339 215 aa17.49■□□□□ 0.39
GTF3C4-202ENST00000483873 FGF6P10767 208 aa17.48■□□□□ 0.39
GTF3C4-202ENST00000483873 FCER1GP30273 86 aa17.48■□□□□ 0.39
GTF3C4-202ENST00000483873 AMMECR1LQ6DCA0 310 aa17.48■□□□□ 0.39
GTF3C4-202ENST00000483873 CDPF1Q6NVV7 123 aa17.48■□□□□ 0.39
GTF3C4-202ENST00000483873 RNASEKQ6P5S7 137 aaKnown RBP17.48■□□□□ 0.39
GTF3C4-202ENST00000483873 KRTAP17-1Q9BYP8 105 aa17.48■□□□□ 0.39
GTF3C4-202ENST00000483873 IGLV10-54A0A075B6I4 117 aa17.47■□□□□ 0.39
GTF3C4-202ENST00000483873 H7C423 109 aa17.47■□□□□ 0.39
GTF3C4-202ENST00000483873 TCAPO15273 167 aa17.47■□□□□ 0.39
GTF3C4-202ENST00000483873 KRTAP26-1Q6PEX3 210 aa17.47■□□□□ 0.39
GTF3C4-202ENST00000483873 Q8N8P6 123 aa17.47■□□□□ 0.39
GTF3C4-202ENST00000483873 TRGC2P03986 189 aa17.46■□□□□ 0.39
GTF3C4-202ENST00000483873 IFI27P40305 119 aaPredicted RBP17.45■□□□□ 0.38
GTF3C4-202ENST00000483873 HSPG2P98160 4391 aa17.44■□□□□ 0.38
GTF3C4-202ENST00000483873 IGLV5-52A0A0A0MRZ9 124 aa17.44■□□□□ 0.38
GTF3C4-202ENST00000483873 IGLV2-33A0A075B6J2 118 aaPredicted RBP17.43■□□□□ 0.38
GTF3C4-202ENST00000483873 IGKV3OR2-268A0A0C4DH90 116 aa17.43■□□□□ 0.38
GTF3C4-202ENST00000483873 C18orf32Q8TCD1 76 aa17.43■□□□□ 0.38
GTF3C4-202ENST00000483873 NTN5Q8WTR8 489 aaPredicted RBP17.43■□□□□ 0.38
GTF3C4-202ENST00000483873 NXT2Q9NPJ8 142 aaKnown RBP17.43■□□□□ 0.38
GTF3C4-202ENST00000483873 RYR1P21817 5038 aa17.42■□□□□ 0.38
GTF3C4-202ENST00000483873 ZNF25P17030 456 aaPredicted RBP17.41■□□□□ 0.38
GTF3C4-202ENST00000483873 KRTAP10-1P60331 282 aa17.41■□□□□ 0.38
GTF3C4-202ENST00000483873 TRAV8-4A0A0B4J246 113 aa17.4■□□□□ 0.38
GTF3C4-202ENST00000483873 PCLOQ9Y6V0 5065 aa17.4■□□□□ 0.38
GTF3C4-202ENST00000483873 MRPL52Q86TS9 123 aaKnown RBP17.39■□□□□ 0.38
GTF3C4-202ENST00000483873 PRSS3P2Q8NHM4 247 aa17.39■□□□□ 0.38
GTF3C4-202ENST00000483873 GCSHP23434 173 aa17.38■□□□□ 0.37
GTF3C4-202ENST00000483873 TMEM101Q96IK0 257 aa17.38■□□□□ 0.37
GTF3C4-202ENST00000483873 OR5A1Q8NGJ0 315 aa17.38■□□□□ 0.37
GTF3C4-202ENST00000483873 USP17L23D6RBM5 183 aa17.37■□□□□ 0.37
GTF3C4-202ENST00000483873 CDK2AP2O75956 126 aa17.37■□□□□ 0.37
GTF3C4-202ENST00000483873 URB1-AS1Q96HZ7 61 aa17.37■□□□□ 0.37
GTF3C4-202ENST00000483873 K7EMI3 77 aa17.36■□□□□ 0.37
GTF3C4-202ENST00000483873 RPL39P62891 51 aaKnown RBP17.36■□□□□ 0.37
GTF3C4-202ENST00000483873 CDC42SE2Q9NRR3 84 aa17.35■□□□□ 0.37
GTF3C4-202ENST00000483873 UBE2D4Q9Y2X8 147 aa17.35■□□□□ 0.37
GTF3C4-202ENST00000483873 LINC01546A6NGU7 62 aa17.34■□□□□ 0.37
GTF3C4-202ENST00000483873 ORMDL2Q53FV1 153 aa17.34■□□□□ 0.37
GTF3C4-202ENST00000483873 DNAH8Q96JB1 4490 aa17.34■□□□□ 0.37
GTF3C4-202ENST00000483873 FA2HQ7L5A8 372 aa17.33■□□□□ 0.36
GTF3C4-202ENST00000483873 TMEM18Q96B42 140 aa17.33■□□□□ 0.36
GTF3C4-202ENST00000483873 GAGE12HA6NDE8 117 aa17.32■□□□□ 0.36
GTF3C4-202ENST00000483873 ZNF664Q8N3J9 261 aa17.32■□□□□ 0.36
GTF3C4-202ENST00000483873 C14orf177Q52M58 125 aa17.31■□□□□ 0.36
GTF3C4-202ENST00000483873 DGAT2L7PQ6IED9 249 aa17.31■□□□□ 0.36
GTF3C4-202ENST00000483873 CHCHD10Q8WYQ3 142 aaPredicted RBP17.31■□□□□ 0.36
GTF3C4-202ENST00000483873 PRSS1P07477 247 aa17.3■□□□□ 0.36
GTF3C4-202ENST00000483873 LINC01620Q4KN68 170 aa17.3■□□□□ 0.36
GTF3C4-202ENST00000483873 RNASE13Q5GAN3 156 aaKnown RBP17.3■□□□□ 0.36
GTF3C4-202ENST00000483873 LINC00614P0C842 121 aa17.3■□□□□ 0.36
GTF3C4-202ENST00000483873 C2orf66Q6UXQ4 117 aa17.3■□□□□ 0.36
GTF3C4-202ENST00000483873 Q6ZUT4 128 aa17.3■□□□□ 0.36
GTF3C4-202ENST00000483873 CSDC2Q9Y534 153 aaKnown RBP17.3■□□□□ 0.36
GTF3C4-202ENST00000483873 LINC00959A0A1B0GUT2 108 aa17.29■□□□□ 0.36
GTF3C4-202ENST00000483873 TIMM21Q9BVV7 248 aa17.29■□□□□ 0.36
GTF3C4-202ENST00000483873 AP5S1Q9NUS5 200 aa17.29■□□□□ 0.36
GTF3C4-202ENST00000483873 CYSLTR1Q9Y271 337 aa17.28■□□□□ 0.36
GTF3C4-202ENST00000483873 SMAGPQ0VAQ4 97 aa17.27■□□□□ 0.35
GTF3C4-202ENST00000483873 XCL1P47992 114 aa17.26■□□□□ 0.35
GTF3C4-202ENST00000483873 RAB5BP61020 215 aa17.26■□□□□ 0.35
GTF3C4-202ENST00000483873 FAM104AQ969W3 186 aa17.26■□□□□ 0.35
GTF3C4-202ENST00000483873 CCL25O15444 150 aa17.25■□□□□ 0.35
GTF3C4-202ENST00000483873 XGP55808 180 aa17.25■□□□□ 0.35
GTF3C4-202ENST00000483873 SPANXA1Q9NS26 97 aa17.25■□□□□ 0.35
GTF3C4-202ENST00000483873 FOXI1Q12951 378 aa17.24■□□□□ 0.35
GTF3C4-202ENST00000483873 BAGE3Q86Y29 109 aa17.24■□□□□ 0.35
GTF3C4-202ENST00000483873 OPRPNQ99935 248 aaPredicted RBP17.24■□□□□ 0.35
GTF3C4-202ENST00000483873 FAM30AQ9NZY2 134 aa17.24■□□□□ 0.35
GTF3C4-202ENST00000483873 A0A096LNJ9 63 aa17.23■□□□□ 0.35
GTF3C4-202ENST00000483873 HIST1H2BKO60814 126 aa17.23■□□□□ 0.35
GTF3C4-202ENST00000483873 HIST1H2BJP06899 126 aa17.23■□□□□ 0.35
GTF3C4-202ENST00000483873 HIST1H2BOP23527 126 aa17.23■□□□□ 0.35
GTF3C4-202ENST00000483873 HIST1H2BBP33778 126 aa17.23■□□□□ 0.35
GTF3C4-202ENST00000483873 HIST1H2BDP58876 126 aa17.23■□□□□ 0.35
GTF3C4-202ENST00000483873 HIST1H2BCP62807 126 aa17.23■□□□□ 0.35
GTF3C4-202ENST00000483873 HAMPP81172 84 aa17.23■□□□□ 0.35
GTF3C4-202ENST00000483873 HIST2H2BEQ16778 126 aa17.23■□□□□ 0.35
GTF3C4-202ENST00000483873 HIST2H2BFQ5QNW6 126 aaPredicted RBP17.23■□□□□ 0.35
GTF3C4-202ENST00000483873 C15orf56Q8N910 161 aa17.23■□□□□ 0.35
GTF3C4-202ENST00000483873 HIST1H2BHQ93079 126 aa17.23■□□□□ 0.35
GTF3C4-202ENST00000483873 TOMM6Q96B49 74 aa17.23■□□□□ 0.35
GTF3C4-202ENST00000483873 HIST1H2BNQ99877 126 aa17.23■□□□□ 0.35
GTF3C4-202ENST00000483873 HIST1H2BMQ99879 126 aa17.23■□□□□ 0.35
GTF3C4-202ENST00000483873 SS18Q15532 418 aa17.22■□□□□ 0.35
GTF3C4-202ENST00000483873 PYGO1Q9Y3Y4 419 aa17.22■□□□□ 0.35
GTF3C4-202ENST00000483873 G0S2P27469 103 aa17.21■□□□□ 0.35
GTF3C4-202ENST00000483873 LINC00310P59036 64 aa17.21■□□□□ 0.35
GTF3C4-202ENST00000483873 PMCHL1Q16048 86 aa17.21■□□□□ 0.35
GTF3C4-202ENST00000483873 CHCHD1Q96BP2 118 aaKnown RBP17.21■□□□□ 0.35
GTF3C4-202ENST00000483873 hDV102S1A0JD36 115 aa17.21■□□□□ 0.34
GTF3C4-202ENST00000483873 IGIPA6NJ69 53 aa17.2■□□□□ 0.34
GTF3C4-202ENST00000483873 MRPS36P82909 103 aaKnown RBP17.2■□□□□ 0.34
GTF3C4-202ENST00000483873 IGLV4-3A0A075B6K6 122 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms