RNA–Protein interactions for RNA: ENST00000483503.5

SND1-210, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-210ENST00000483503 NOTCH3Q9UM47 2321 aa8.46□□□□□ -1.05
SND1-210ENST00000483503 MIFP14174 115 aa8.46□□□□□ -1.06
SND1-210ENST00000483503 TIRAPP58753 221 aa8.46□□□□□ -1.06
SND1-210ENST00000483503 AMMECR1LQ6DCA0 310 aa8.46□□□□□ -1.06
SND1-210ENST00000483503 SHISA2Q6UWI4 295 aa8.46□□□□□ -1.06
SND1-210ENST00000483503 Q6ZUT4 128 aa8.46□□□□□ -1.06
SND1-210ENST00000483503 SBSPONQ8IVN8 264 aa8.46□□□□□ -1.06
SND1-210ENST00000483503 SPATA3Q8NHX4 192 aa8.46□□□□□ -1.06
SND1-210ENST00000483503 GEMIN7Q9H840 131 aaKnown RBP8.46□□□□□ -1.06
SND1-210ENST00000483503 NBEAL1Q6ZS30 2694 aa8.45□□□□□ -1.06
SND1-210ENST00000483503 TMEM238LA0A1B0GVL6 79 aa8.45□□□□□ -1.06
SND1-210ENST00000483503 C9orf118A6NHY6 69 aa8.45□□□□□ -1.06
SND1-210ENST00000483503 A6NJY4 79 aa8.45□□□□□ -1.06
SND1-210ENST00000483503 DEFB130BP0DP73 79 aa8.45□□□□□ -1.06
SND1-210ENST00000483503 DEFB130AP0DP74 79 aa8.45□□□□□ -1.06
SND1-210ENST00000483503 VAMP3Q15836 100 aa8.45□□□□□ -1.06
SND1-210ENST00000483503 CEMP1Q6PRD7 247 aaPredicted RBP8.45□□□□□ -1.06
SND1-210ENST00000483503 C3orf56Q8N813 242 aa8.45□□□□□ -1.06
SND1-210ENST00000483503 OR5A1Q8NGJ0 315 aa8.45□□□□□ -1.06
SND1-210ENST00000483503 FAM104AQ969W3 186 aa8.45□□□□□ -1.06
SND1-210ENST00000483503 UBE2D1P51668 147 aa8.44□□□□□ -1.06
SND1-210ENST00000483503 HERVK_113P63121 156 aa8.44□□□□□ -1.06
SND1-210ENST00000483503 UBE2V1Q13404 147 aa8.44□□□□□ -1.06
SND1-210ENST00000483503 KRTAP24-1Q3LI83 254 aa8.44□□□□□ -1.06
SND1-210ENST00000483503 NTM-AS1Q6ZSK4 140 aa8.44□□□□□ -1.06
SND1-210ENST00000483503 FAM19A3Q7Z5A8 133 aa8.44□□□□□ -1.06
SND1-210ENST00000483503 SPANXB1Q9NS25 103 aaPredicted RBP8.44□□□□□ -1.06
SND1-210ENST00000483503 LINC00694P0DN24 101 aa8.43□□□□□ -1.06
SND1-210ENST00000483503 FXYD2P54710 66 aa8.43□□□□□ -1.06
SND1-210ENST00000483503 SRSF9Q13242 221 aaKnown RBP eCLIP8.43□□□□□ -1.06
SND1-210ENST00000483503 DEFB135Q30KP9 77 aa8.43□□□□□ -1.06
SND1-210ENST00000483503 RNF183Q96D59 192 aa8.43□□□□□ -1.06
SND1-210ENST00000483503 PRO0255Q9UI72 69 aa8.43□□□□□ -1.06
SND1-210ENST00000483503 CUBNO60494 3623 aa8.43□□□□□ -1.06
SND1-210ENST00000483503 IGLV5-45A0A087WSX0 123 aa8.42□□□□□ -1.06
SND1-210ENST00000483503 IGHV1-58A0A0C4DH39 117 aa8.42□□□□□ -1.06
SND1-210ENST00000483503 TEX48A0A1B0GUV7 120 aa8.42□□□□□ -1.06
SND1-210ENST00000483503 IGHV4-30-4P0DP06 118 aa8.42□□□□□ -1.06
SND1-210ENST00000483503 FAM222AQ5U5X8 452 aa8.42□□□□□ -1.06
SND1-210ENST00000483503 NIPBLQ6KC79 2804 aaeCLIP8.41□□□□□ -1.06
SND1-210ENST00000483503 TRBV6-8A0A0A6YYG3 113 aa8.41□□□□□ -1.06
SND1-210ENST00000483503 IGHV4-28A0A0C4DH34 117 aa8.41□□□□□ -1.06
SND1-210ENST00000483503 A0A0J9YY99 117 aa8.41□□□□□ -1.06
SND1-210ENST00000483503 LOC100131303A0A0U1RQF7 123 aa8.41□□□□□ -1.06
SND1-210ENST00000483503 IGHV3-30-3P0DP02 117 aa8.41□□□□□ -1.06
SND1-210ENST00000483503 TSPEAR-AS2P59090 65 aa8.41□□□□□ -1.06
SND1-210ENST00000483503 DAD1P61803 113 aa8.41□□□□□ -1.06
SND1-210ENST00000483503 RNASE13Q5GAN3 156 aaKnown RBP8.41□□□□□ -1.06
SND1-210ENST00000483503 ATP6V0E2Q8NHE4 81 aa8.41□□□□□ -1.06
SND1-210ENST00000483503 CDC42SE2Q9NRR3 84 aa8.41□□□□□ -1.06
SND1-210ENST00000483503 NHP2Q9NX24 153 aaKnown RBP8.41□□□□□ -1.06
SND1-210ENST00000483503 ATRQ13535 2644 aa8.4□□□□□ -1.06
SND1-210ENST00000483503 TMEM238C9JI98 176 aa8.4□□□□□ -1.06
SND1-210ENST00000483503 PAX4O43316 350 aa8.4□□□□□ -1.06
SND1-210ENST00000483503 SPART-AS1P0CW21 52 aa8.4□□□□□ -1.06
SND1-210ENST00000483503 GYPEP15421 78 aa8.4□□□□□ -1.06
SND1-210ENST00000483503 Q6ZVH6 145 aa8.4□□□□□ -1.06
SND1-210ENST00000483503 GTF2H5Q6ZYL4 71 aa8.4□□□□□ -1.06
SND1-210ENST00000483503 VSIG2Q96IQ7 327 aa8.4□□□□□ -1.06
SND1-210ENST00000483503 A0A1B0GWB2 263 aa8.39□□□□□ -1.07
SND1-210ENST00000483503 A8MZ25 164 aa8.39□□□□□ -1.07
SND1-210ENST00000483503 C12orf74Q32Q52 190 aa8.39□□□□□ -1.07
SND1-210ENST00000483503 H3BUT2 72 aa8.38□□□□□ -1.07
SND1-210ENST00000483503 ATP5G1P05496 136 aa8.38□□□□□ -1.07
SND1-210ENST00000483503 FABP2P12104 132 aa8.38□□□□□ -1.07
SND1-210ENST00000483503 EGFEM1PQ0D2K5 195 aa8.38□□□□□ -1.07
SND1-210ENST00000483503 Q8NAQ8 132 aa8.38□□□□□ -1.07
SND1-210ENST00000483503 RAB37Q96AX2 223 aa8.38□□□□□ -1.07
SND1-210ENST00000483503 CHCHD5Q9BSY4 110 aa8.38□□□□□ -1.07
SND1-210ENST00000483503 IGHV3-64A0A075B6Q5 118 aa8.37□□□□□ -1.07
SND1-210ENST00000483503 A0A1W2PPM0 123 aa8.37□□□□□ -1.07
SND1-210ENST00000483503 GAGE10A6NGK3 116 aa8.37□□□□□ -1.07
SND1-210ENST00000483503 SPINK8P0C7L1 97 aa8.37□□□□□ -1.07
SND1-210ENST00000483503 GAGE6Q13070 117 aa8.37□□□□□ -1.07
SND1-210ENST00000483503 LINC00242Q5T6M2 205 aa8.37□□□□□ -1.07
SND1-210ENST00000483503 SAMD5Q5TGI4 173 aa8.37□□□□□ -1.07
SND1-210ENST00000483503 ZFAND6Q6FIF0 208 aa8.37□□□□□ -1.07
SND1-210ENST00000483503 SH2D6Q7Z4S9 175 aa8.37□□□□□ -1.07
SND1-210ENST00000483503 CDKN2A-AS1Q9UH64 79 aa8.37□□□□□ -1.07
SND1-210ENST00000483503 NDUFA12Q9UI09 145 aa8.37□□□□□ -1.07
SND1-210ENST00000483503 TRAV26-1A0A087WT03 109 aa8.36□□□□□ -1.07
SND1-210ENST00000483503 TRAV13-1A0A0B4J241 112 aa8.36□□□□□ -1.07
SND1-210ENST00000483503 CCL25O15444 150 aa8.36□□□□□ -1.07
SND1-210ENST00000483503 IGHV3-30P01768 117 aa8.36□□□□□ -1.07
SND1-210ENST00000483503 IGHV3-30-5P0DP03 117 aa8.36□□□□□ -1.07
SND1-210ENST00000483503 RPL24P83731 157 aaKnown RBP8.36□□□□□ -1.07
SND1-210ENST00000483503 TRAV8-3A0A0A6YYJ7 113 aa8.35□□□□□ -1.07
SND1-210ENST00000483503 IGLV5-39A0A0G2JS06 123 aa8.35□□□□□ -1.07
SND1-210ENST00000483503 A0A0J9YXY3 114 aa8.35□□□□□ -1.07
SND1-210ENST00000483503 IGLL5B9A064 214 aa8.35□□□□□ -1.07
SND1-210ENST00000483503 K7EP13 123 aa8.35□□□□□ -1.07
SND1-210ENST00000483503 TIMM17BO60830 172 aa8.35□□□□□ -1.07
SND1-210ENST00000483503 OXLD1Q5BKU9 147 aa8.35□□□□□ -1.07
SND1-210ENST00000483503 A0A1B0GUV1 79 aa8.34□□□□□ -1.07
SND1-210ENST00000483503 K7EP34 96 aa8.34□□□□□ -1.07
SND1-210ENST00000483503 K7ERJ3 54 aa8.34□□□□□ -1.07
SND1-210ENST00000483503 NDUFA1O15239 70 aa8.34□□□□□ -1.07
SND1-210ENST00000483503 CIRBPQ14011 172 aaKnown RBP8.34□□□□□ -1.07
SND1-210ENST00000483503 TENM1Q9UKZ4 2725 aa8.33□□□□□ -1.08
SND1-210ENST00000483503 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 533.4 ms