RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 REG3AQ06141 175 aa8.89□□□□□ -0.99
HDAC1-208ENST00000482310 ENHOQ6UWT2 76 aa8.89□□□□□ -0.99
HDAC1-208ENST00000482310 DNAH2Q9P225 4427 aa8.89□□□□□ -0.99
HDAC1-208ENST00000482310 RAB5BP61020 215 aa8.88□□□□□ -0.99
HDAC1-208ENST00000482310 SMAGPQ0VAQ4 97 aa8.88□□□□□ -0.99
HDAC1-208ENST00000482310 MRPL52Q86TS9 123 aaKnown RBP8.88□□□□□ -0.99
HDAC1-208ENST00000482310 C1orf196B1AJZ1 125 aa8.87□□□□□ -0.99
HDAC1-208ENST00000482310 K7EMI3 77 aa8.87□□□□□ -0.99
HDAC1-208ENST00000482310 HIST1H2BKO60814 126 aa8.87□□□□□ -0.99
HDAC1-208ENST00000482310 SERF1AO75920 110 aa8.87□□□□□ -0.99
HDAC1-208ENST00000482310 HIST1H2BJP06899 126 aa8.87□□□□□ -0.99
HDAC1-208ENST00000482310 HIST1H2BOP23527 126 aa8.87□□□□□ -0.99
HDAC1-208ENST00000482310 HIST1H2BBP33778 126 aa8.87□□□□□ -0.99
HDAC1-208ENST00000482310 HIST1H2BDP58876 126 aa8.87□□□□□ -0.99
HDAC1-208ENST00000482310 HIST1H2BCP62807 126 aa8.87□□□□□ -0.99
HDAC1-208ENST00000482310 HIST2H2BEQ16778 126 aa8.87□□□□□ -0.99
HDAC1-208ENST00000482310 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.87□□□□□ -0.99
HDAC1-208ENST00000482310 ZNF664Q8N3J9 261 aa8.87□□□□□ -0.99
HDAC1-208ENST00000482310 HIST1H2BHQ93079 126 aa8.87□□□□□ -0.99
HDAC1-208ENST00000482310 HIST1H2BNQ99877 126 aa8.87□□□□□ -0.99
HDAC1-208ENST00000482310 HIST1H2BMQ99879 126 aa8.87□□□□□ -0.99
HDAC1-208ENST00000482310 TRAV8-3A0A0A6YYJ7 113 aa8.86□□□□□ -0.99
HDAC1-208ENST00000482310 LINC01546A6NGU7 62 aa8.86□□□□□ -0.99
HDAC1-208ENST00000482310 K7EP13 123 aa8.86□□□□□ -0.99
HDAC1-208ENST00000482310 PSCAO43653 123 aa8.86□□□□□ -0.99
HDAC1-208ENST00000482310 Q0VG73 95 aa8.86□□□□□ -0.99
HDAC1-208ENST00000482310 ZC2HC1BQ5TFG8 222 aa8.86□□□□□ -0.99
HDAC1-208ENST00000482310 TOMM6Q96B49 74 aa8.86□□□□□ -0.99
HDAC1-208ENST00000482310 SCGB3A1Q96QR1 104 aa8.86□□□□□ -0.99
HDAC1-208ENST00000482310 CDC42SE2Q9NRR3 84 aa8.86□□□□□ -0.99
HDAC1-208ENST00000482310 SPANXA1Q9NS26 97 aa8.86□□□□□ -0.99
HDAC1-208ENST00000482310 IGLV4-3A0A075B6K6 122 aa8.85□□□□□ -0.99
HDAC1-208ENST00000482310 RTL8CO15255 209 aa8.85□□□□□ -0.99
HDAC1-208ENST00000482310 HSBP1O75506 76 aa8.85□□□□□ -0.99
HDAC1-208ENST00000482310 LINC00310P59036 64 aa8.85□□□□□ -0.99
HDAC1-208ENST00000482310 FAM19A2Q8N3H0 131 aa8.85□□□□□ -0.99
HDAC1-208ENST00000482310 CHCHD1Q96BP2 118 aaKnown RBP8.85□□□□□ -0.99
HDAC1-208ENST00000482310 TIMM21Q9BVV7 248 aa8.85□□□□□ -0.99
HDAC1-208ENST00000482310 C1orf43Q9BWL3 253 aa8.85□□□□□ -0.99
HDAC1-208ENST00000482310 A0A096LNJ9 63 aa8.84□□□□□ -0.99
HDAC1-208ENST00000482310 TRAV13-1A0A0B4J241 112 aa8.84□□□□□ -0.99
HDAC1-208ENST00000482310 HBDP02042 147 aa8.84□□□□□ -0.99
HDAC1-208ENST00000482310 G0S2P27469 103 aa8.84□□□□□ -0.99
HDAC1-208ENST00000482310 MIAQ16674 131 aa8.84□□□□□ -0.99
HDAC1-208ENST00000482310 NFE4Q86UQ8 179 aa8.84□□□□□ -0.99
HDAC1-208ENST00000482310 PRR34Q9NV39 138 aa8.84□□□□□ -0.99
HDAC1-208ENST00000482310 IFITM10A6NMD0 228 aa8.83□□□□□ -1
HDAC1-208ENST00000482310 NUPR1O60356 82 aa8.83□□□□□ -1
HDAC1-208ENST00000482310 NDUFA6P56556 154 aa8.83□□□□□ -1
HDAC1-208ENST00000482310 Q6ZN92 141 aa8.83□□□□□ -1
HDAC1-208ENST00000482310 Q6ZRN7 208 aaPredicted RBP8.83□□□□□ -1
HDAC1-208ENST00000482310 FAM104AQ969W3 186 aa8.83□□□□□ -1
HDAC1-208ENST00000482310 RMI2Q96E14 147 aa8.83□□□□□ -1
HDAC1-208ENST00000482310 TMEM141Q96I45 108 aa8.83□□□□□ -1
HDAC1-208ENST00000482310 CSDC2Q9Y534 153 aaKnown RBP8.83□□□□□ -1
HDAC1-208ENST00000482310 LINC00959A0A1B0GUT2 108 aa8.82□□□□□ -1
HDAC1-208ENST00000482310 IGIPA6NJ69 53 aa8.82□□□□□ -1
HDAC1-208ENST00000482310 LECT2O14960 151 aa8.82□□□□□ -1
HDAC1-208ENST00000482310 XCL1P47992 114 aa8.82□□□□□ -1
HDAC1-208ENST00000482310 TNP2Q05952 138 aa8.82□□□□□ -1
HDAC1-208ENST00000482310 TEX43Q6ZNM6 134 aa8.82□□□□□ -1
HDAC1-208ENST00000482310 PYGO1Q9Y3Y4 419 aa8.82□□□□□ -1
HDAC1-208ENST00000482310 GAGE12HA6NDE8 117 aa8.81□□□□□ -1
HDAC1-208ENST00000482310 PRSS29PA6NIE9 313 aa8.81□□□□□ -1
HDAC1-208ENST00000482310 CCL25O15444 150 aa8.81□□□□□ -1
HDAC1-208ENST00000482310 MRPS36P82909 103 aaKnown RBP8.81□□□□□ -1
HDAC1-208ENST00000482310 SS18Q15532 418 aa8.81□□□□□ -1
HDAC1-208ENST00000482310 ERASQ7Z444 233 aa8.81□□□□□ -1
HDAC1-208ENST00000482310 CHCHD10Q8WYQ3 142 aaPredicted RBP8.81□□□□□ -1
HDAC1-208ENST00000482310 TM2D2Q9BX73 214 aa8.81□□□□□ -1
HDAC1-208ENST00000482310 VCX2Q9H322 139 aa8.81□□□□□ -1
HDAC1-208ENST00000482310 DNAH17Q9UFH2 4485 aa8.81□□□□□ -1
HDAC1-208ENST00000482310 LINC00173Q6ZV60 143 aa8.8□□□□□ -1
HDAC1-208ENST00000482310 BAALCQ8WXS3 180 aa8.8□□□□□ -1
HDAC1-208ENST00000482310 TIMM17AQ99595 171 aa8.8□□□□□ -1
HDAC1-208ENST00000482310 C2orf88Q9BSF0 95 aa8.8□□□□□ -1
HDAC1-208ENST00000482310 KIAA1109Q2LD37 5005 aa8.79□□□□□ -1
HDAC1-208ENST00000482310 TRAV8-4A0A0B4J246 113 aa8.79□□□□□ -1
HDAC1-208ENST00000482310 H0Y8G0 127 aa8.79□□□□□ -1
HDAC1-208ENST00000482310 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.79□□□□□ -1
HDAC1-208ENST00000482310 FABP4P15090 132 aa8.79□□□□□ -1
HDAC1-208ENST00000482310 PDZD11Q5EBL8 140 aa8.79□□□□□ -1
HDAC1-208ENST00000482310 MAPKAPK5-AS1Q8N8E1 139 aa8.79□□□□□ -1
HDAC1-208ENST00000482310 PCLOQ9Y6V0 5065 aa8.79□□□□□ -1
HDAC1-208ENST00000482310 WFDC2Q14508 124 aa8.78□□□□□ -1
HDAC1-208ENST00000482310 LINC01549A6NIU2 74 aa8.77□□□□□ -1.01
HDAC1-208ENST00000482310 FUSP35637 526 aaKnown RBP eCLIP8.77□□□□□ -1.01
HDAC1-208ENST00000482310 PAPPA-AS1Q5QFB9 102 aa8.77□□□□□ -1.01
HDAC1-208ENST00000482310 KRTAP26-1Q6PEX3 210 aa8.77□□□□□ -1.01
HDAC1-208ENST00000482310 AMELXQ99217 191 aa8.77□□□□□ -1.01
HDAC1-208ENST00000482310 COX11Q9Y6N1 276 aa8.77□□□□□ -1.01
HDAC1-208ENST00000482310 FAT2Q9NYQ8 4349 aa8.77□□□□□ -1.01
HDAC1-208ENST00000482310 ATP5LO75964 103 aa8.76□□□□□ -1.01
HDAC1-208ENST00000482310 LEPROTL1O95214 131 aa8.76□□□□□ -1.01
HDAC1-208ENST00000482310 UBE2D1P51668 147 aa8.76□□□□□ -1.01
HDAC1-208ENST00000482310 FOXI1Q12951 378 aa8.76□□□□□ -1.01
HDAC1-208ENST00000482310 IFI27L1Q96BM0 104 aa8.76□□□□□ -1.01
HDAC1-208ENST00000482310 A0A087WTM6 91 aa8.75□□□□□ -1.01
HDAC1-208ENST00000482310 PRSS1P07477 247 aa8.75□□□□□ -1.01
HDAC1-208ENST00000482310 PMVKQ15126 192 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms