RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 GAFA1Q96PS6 74 aa1.9□□□□□ -2.11
SMC6-208ENST00000481708 XAGE1AQ9HD64 81 aa1.9□□□□□ -2.11
SMC6-208ENST00000481708 MUC21A0A0G2JKD1 596 aa1.89□□□□□ -2.11
SMC6-208ENST00000481708 MOBPQ13875 183 aa1.89□□□□□ -2.11
SMC6-208ENST00000481708 CLLU1Q5K131 121 aa1.89□□□□□ -2.11
SMC6-208ENST00000481708 C1orf134Q5TEV5 83 aa1.89□□□□□ -2.11
SMC6-208ENST00000481708 Q6ZSA8 131 aa1.89□□□□□ -2.11
SMC6-208ENST00000481708 DYNAPQ8N1N2 210 aa1.89□□□□□ -2.11
SMC6-208ENST00000481708 FAM19A2Q8N3H0 131 aa1.89□□□□□ -2.11
SMC6-208ENST00000481708 C4orf3Q8WVX3 66 aa1.89□□□□□ -2.11
SMC6-208ENST00000481708 DUSP21Q9H596 190 aa1.89□□□□□ -2.11
SMC6-208ENST00000481708 TRAV7A0A075B6U4 112 aa1.89□□□□□ -2.11
SMC6-208ENST00000481708 NNATQ16517 81 aa1.89□□□□□ -2.11
SMC6-208ENST00000481708 PSMG3Q9BT73 122 aaPredicted RBP1.89□□□□□ -2.11
SMC6-208ENST00000481708 SEC11CQ9BY50 192 aa1.89□□□□□ -2.11
SMC6-208ENST00000481708 GNRH2O43555 120 aa1.89□□□□□ -2.11
SMC6-208ENST00000481708 NCR2O95944 276 aa1.89□□□□□ -2.11
SMC6-208ENST00000481708 IZUMO2Q6UXV1 221 aa1.89□□□□□ -2.11
SMC6-208ENST00000481708 Q6ZQT7 251 aa1.89□□□□□ -2.11
SMC6-208ENST00000481708 RETNLBQ9BQ08 111 aa1.89□□□□□ -2.11
SMC6-208ENST00000481708 TP53TG3Q9ULZ0 132 aa1.89□□□□□ -2.11
SMC6-208ENST00000481708 TRAV2A0A0B4J234 112 aa1.88□□□□□ -2.11
SMC6-208ENST00000481708 FNDC10F2Z333 226 aa1.88□□□□□ -2.11
SMC6-208ENST00000481708 DEFB112Q30KQ8 113 aa1.88□□□□□ -2.11
SMC6-208ENST00000481708 DEFB107AQ8IZN7 70 aa1.88□□□□□ -2.11
SMC6-208ENST00000481708 CIB3Q96Q77 187 aaPredicted RBP1.88□□□□□ -2.11
SMC6-208ENST00000481708 TMEM106BQ9NUM4 274 aa1.88□□□□□ -2.11
SMC6-208ENST00000481708 SYNGR2O43760 224 aa1.88□□□□□ -2.11
SMC6-208ENST00000481708 IGHV3-53P01767 116 aa1.88□□□□□ -2.11
SMC6-208ENST00000481708 KRTAP1-4P0C5Y4 121 aa1.88□□□□□ -2.11
SMC6-208ENST00000481708 AAED1Q7RTV5 226 aa1.88□□□□□ -2.11
SMC6-208ENST00000481708 DPY30Q9C005 99 aa1.88□□□□□ -2.11
SMC6-208ENST00000481708 CCDC167Q9P0B6 97 aa1.88□□□□□ -2.11
SMC6-208ENST00000481708 SOX21Q9Y651 276 aaPredicted RBP1.88□□□□□ -2.11
SMC6-208ENST00000481708 IGLV4-69A0A075B6H9 119 aa1.88□□□□□ -2.11
SMC6-208ENST00000481708 UQCRQO14949 82 aa1.88□□□□□ -2.11
SMC6-208ENST00000481708 CD24P25063 80 aa1.88□□□□□ -2.11
SMC6-208ENST00000481708 RPL38P63173 70 aaKnown RBP1.88□□□□□ -2.11
SMC6-208ENST00000481708 KLRD1Q13241 179 aa1.88□□□□□ -2.11
SMC6-208ENST00000481708 EIF5AL1Q6IS14 154 aaKnown RBP1.88□□□□□ -2.11
SMC6-208ENST00000481708 SLC35B3Q9H1N7 401 aa1.88□□□□□ -2.11
SMC6-208ENST00000481708 HSPE1-MOB4S4R3N1 261 aa1.88□□□□□ -2.11
SMC6-208ENST00000481708 DMBT1Q9UGM3 2413 aaPredicted RBP1.87□□□□□ -2.11
SMC6-208ENST00000481708 IGLV2-18A0A075B6J9 118 aa1.87□□□□□ -2.11
SMC6-208ENST00000481708 HBDP02042 147 aa1.87□□□□□ -2.11
SMC6-208ENST00000481708 S100A3P33764 101 aa1.87□□□□□ -2.11
SMC6-208ENST00000481708 MPV17P39210 176 aa1.87□□□□□ -2.11
SMC6-208ENST00000481708 YPEL3P61236 119 aaPredicted RBP1.87□□□□□ -2.11
SMC6-208ENST00000481708 C10orf111Q8N326 155 aa1.87□□□□□ -2.11
SMC6-208ENST00000481708 SFT2D1Q8WV19 159 aa1.87□□□□□ -2.11
SMC6-208ENST00000481708 CLEC2BQ92478 149 aa1.87□□□□□ -2.11
SMC6-208ENST00000481708 WFDC6Q9BQY6 131 aa1.87□□□□□ -2.11
SMC6-208ENST00000481708 TRAV1-1A0A0B4J248 108 aa1.87□□□□□ -2.11
SMC6-208ENST00000481708 C7orf71A4D174 169 aa1.87□□□□□ -2.11
SMC6-208ENST00000481708 J3QR89 54 aa1.87□□□□□ -2.11
SMC6-208ENST00000481708 TFF1P04155 84 aa1.87□□□□□ -2.11
SMC6-208ENST00000481708 KRTAP10-8P60410 259 aa1.87□□□□□ -2.11
SMC6-208ENST00000481708 PKIAP61925 76 aa1.87□□□□□ -2.11
SMC6-208ENST00000481708 Q6ZRN7 208 aaPredicted RBP1.87□□□□□ -2.11
SMC6-208ENST00000481708 C5orf17Q8NAS9 161 aa1.87□□□□□ -2.11
SMC6-208ENST00000481708 CHCHD1Q96BP2 118 aaKnown RBP1.87□□□□□ -2.11
SMC6-208ENST00000481708 MIEN1Q9BRT3 115 aa1.87□□□□□ -2.11
SMC6-208ENST00000481708 HEATR1Q9H583 2144 aaKnown RBP1.87□□□□□ -2.11
SMC6-208ENST00000481708 H3BPC8 53 aa1.87□□□□□ -2.11
SMC6-208ENST00000481708 MRPS14O60783 128 aaKnown RBP1.87□□□□□ -2.11
SMC6-208ENST00000481708 TIMM17BO60830 172 aa1.87□□□□□ -2.11
SMC6-208ENST00000481708 IGLV7-43P04211 117 aa1.87□□□□□ -2.11
SMC6-208ENST00000481708 AKAIN1P0CW23 69 aa1.87□□□□□ -2.11
SMC6-208ENST00000481708 BRS3P32247 399 aa1.87□□□□□ -2.11
SMC6-208ENST00000481708 C5orf56Q8N8D9 126 aa1.87□□□□□ -2.11
SMC6-208ENST00000481708 TXNL4BQ9NX01 149 aaKnown RBP1.87□□□□□ -2.11
SMC6-208ENST00000481708 TRAV30A0A087WSZ9 112 aa1.86□□□□□ -2.11
SMC6-208ENST00000481708 TMEM218A2RU14 115 aa1.86□□□□□ -2.11
SMC6-208ENST00000481708 HMGN2P05204 90 aaKnown RBP1.86□□□□□ -2.11
SMC6-208ENST00000481708 CDK6Q00534 326 aa1.86□□□□□ -2.11
SMC6-208ENST00000481708 LINC01590Q5TEZ4 76 aa1.86□□□□□ -2.11
SMC6-208ENST00000481708 Q6ZUT4 128 aa1.86□□□□□ -2.11
SMC6-208ENST00000481708 C9orf62Q8N4C0 152 aa1.86□□□□□ -2.11
SMC6-208ENST00000481708 AP4S1Q9Y587 144 aa1.86□□□□□ -2.11
SMC6-208ENST00000481708 LHFPL6Q9Y693 200 aa1.86□□□□□ -2.11
SMC6-208ENST00000481708 SSR2P43308 183 aa1.86□□□□□ -2.11
SMC6-208ENST00000481708 BLCAPP62952 87 aa1.86□□□□□ -2.11
SMC6-208ENST00000481708 HSD52Q0P140 79 aa1.86□□□□□ -2.11
SMC6-208ENST00000481708 CLECL1Q8IZS7 167 aa1.86□□□□□ -2.11
SMC6-208ENST00000481708 C10orf126Q8N4M7 172 aa1.86□□□□□ -2.11
SMC6-208ENST00000481708 HHLA3Q9XRX5 114 aa1.86□□□□□ -2.11
SMC6-208ENST00000481708 RNF213Q63HN8 5207 aa1.86□□□□□ -2.11
SMC6-208ENST00000481708 A0A1W2PNM2 257 aa1.86□□□□□ -2.11
SMC6-208ENST00000481708 IFITM5A6NNB3 132 aa1.86□□□□□ -2.11
SMC6-208ENST00000481708 SLC50A1Q9BRV3 221 aa1.86□□□□□ -2.11
SMC6-208ENST00000481708 AGPAT4-IT1Q9H0P7 198 aa1.86□□□□□ -2.11
SMC6-208ENST00000481708 TRAPPC1Q9Y5R8 145 aa1.86□□□□□ -2.11
SMC6-208ENST00000481708 M0R143 59 aa1.85□□□□□ -2.11
SMC6-208ENST00000481708 SNAPC5O75971 98 aa1.85□□□□□ -2.11
SMC6-208ENST00000481708 SLC35E3Q7Z769 313 aa1.85□□□□□ -2.11
SMC6-208ENST00000481708 ZNF714Q96N38 554 aa1.85□□□□□ -2.11
SMC6-208ENST00000481708 OR8B2Q96RD0 313 aa1.85□□□□□ -2.11
SMC6-208ENST00000481708 IFNA17P01571 189 aa1.85□□□□□ -2.11
SMC6-208ENST00000481708 FABP4P15090 132 aa1.85□□□□□ -2.11
SMC6-208ENST00000481708 TMEM191AQ9H0A3 160 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms