RNA–Protein interactions for RNA: ENST00000481673.5

CHKB-209, Transcript of choline kinase beta, humanhuman

TSL 1 (best)

Gene CHKB, Length 1,856 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-209ENST00000481673 NTM-AS1Q6ZSK4 140 aa14.06□□□□□ -0.16
CHKB-209ENST00000481673 SBSPONQ8IVN8 264 aa14.06□□□□□ -0.16
CHKB-209ENST00000481673 TMEM243Q9BU79 118 aa14.06□□□□□ -0.16
CHKB-209ENST00000481673 LGALS3P17931 250 aaKnown RBP14.05□□□□□ -0.16
CHKB-209ENST00000481673 GCSHP23434 173 aa14.05□□□□□ -0.16
CHKB-209ENST00000481673 HIST1H4GQ99525 98 aa14.05□□□□□ -0.16
CHKB-209ENST00000481673 TIRAPP58753 221 aa14.04□□□□□ -0.16
CHKB-209ENST00000481673 DEFB135Q30KP9 77 aa14.04□□□□□ -0.16
CHKB-209ENST00000481673 Q6ZUT4 128 aa14.04□□□□□ -0.16
CHKB-209ENST00000481673 UBE2L6O14933 153 aa14.04□□□□□ -0.16
CHKB-209ENST00000481673 LINC00694P0DN24 101 aa14.03□□□□□ -0.16
CHKB-209ENST00000481673 IGHV4-30-4P0DP06 118 aa14.03□□□□□ -0.16
CHKB-209ENST00000481673 UBE2D1P51668 147 aa14.03□□□□□ -0.16
CHKB-209ENST00000481673 PTTG1IPP53801 180 aa14.03□□□□□ -0.16
CHKB-209ENST00000481673 LINC00469Q8N7U9 141 aa14.03□□□□□ -0.16
CHKB-209ENST00000481673 TMEM101Q96IK0 257 aa14.03□□□□□ -0.16
CHKB-209ENST00000481673 PRO0255Q9UI72 69 aa14.03□□□□□ -0.16
CHKB-209ENST00000481673 FAM19A3Q7Z5A8 133 aa14.02□□□□□ -0.16
CHKB-209ENST00000481673 RNF183Q96D59 192 aa14.02□□□□□ -0.16
CHKB-209ENST00000481673 GEMIN7Q9H840 131 aaKnown RBP14.02□□□□□ -0.16
CHKB-209ENST00000481673 SMIM13P0DJ93 91 aa14.01□□□□□ -0.17
CHKB-209ENST00000481673 FAM222AQ5U5X8 452 aa14.01□□□□□ -0.17
CHKB-209ENST00000481673 AMMECR1LQ6DCA0 310 aa14.01□□□□□ -0.17
CHKB-209ENST00000481673 OR5A1Q8NGJ0 315 aa14.01□□□□□ -0.17
CHKB-209ENST00000481673 HERVK_113P63121 156 aa14□□□□□ -0.17
CHKB-209ENST00000481673 TRBV6-8A0A0A6YYG3 113 aa13.99□□□□□ -0.17
CHKB-209ENST00000481673 A8MZ25 164 aa13.99□□□□□ -0.17
CHKB-209ENST00000481673 CDC42SE2Q9NRR3 84 aa13.99□□□□□ -0.17
CHKB-209ENST00000481673 IGLV5-45A0A087WSX0 123 aa13.99□□□□□ -0.17
CHKB-209ENST00000481673 IGHV4-28A0A0C4DH34 117 aa13.99□□□□□ -0.17
CHKB-209ENST00000481673 FXYD2P54710 66 aa13.99□□□□□ -0.17
CHKB-209ENST00000481673 EGFEM1PQ0D2K5 195 aa13.99□□□□□ -0.17
CHKB-209ENST00000481673 RNASE13Q5GAN3 156 aaKnown RBP13.99□□□□□ -0.17
CHKB-209ENST00000481673 SPANXB1Q9NS25 103 aaPredicted RBP13.99□□□□□ -0.17
CHKB-209ENST00000481673 IGHV1-58A0A0C4DH39 117 aa13.98□□□□□ -0.17
CHKB-209ENST00000481673 LOC100131303A0A0U1RQF7 123 aa13.98□□□□□ -0.17
CHKB-209ENST00000481673 TMEM238LA0A1B0GVL6 79 aa13.98□□□□□ -0.17
CHKB-209ENST00000481673 C9orf118A6NHY6 69 aa13.98□□□□□ -0.17
CHKB-209ENST00000481673 A6NJY4 79 aa13.98□□□□□ -0.17
CHKB-209ENST00000481673 A0A0J9YY99 117 aa13.97□□□□□ -0.17
CHKB-209ENST00000481673 TEX48A0A1B0GUV7 120 aa13.97□□□□□ -0.17
CHKB-209ENST00000481673 SRSF9Q13242 221 aaKnown RBP eCLIP13.97□□□□□ -0.17
CHKB-209ENST00000481673 VAMP3Q15836 100 aa13.97□□□□□ -0.17
CHKB-209ENST00000481673 TSPEAR-AS2P59090 65 aa13.97□□□□□ -0.17
CHKB-209ENST00000481673 UBE2V1Q13404 147 aa13.97□□□□□ -0.17
CHKB-209ENST00000481673 Q8NAQ8 132 aa13.97□□□□□ -0.17
CHKB-209ENST00000481673 ATP6V0E2Q8NHE4 81 aa13.97□□□□□ -0.17
CHKB-209ENST00000481673 SPART-AS1P0CW21 52 aa13.96□□□□□ -0.17
CHKB-209ENST00000481673 IGHV3-30-3P0DP02 117 aa13.96□□□□□ -0.17
CHKB-209ENST00000481673 DAD1P61803 113 aa13.96□□□□□ -0.17
CHKB-209ENST00000481673 GYPEP15421 78 aa13.95□□□□□ -0.18
CHKB-209ENST00000481673 Q6ZVH6 145 aa13.95□□□□□ -0.18
CHKB-209ENST00000481673 VSIG2Q96IQ7 327 aa13.95□□□□□ -0.18
CHKB-209ENST00000481673 OXLD1Q5BKU9 147 aa13.95□□□□□ -0.18
CHKB-209ENST00000481673 ATP5G1P05496 136 aa13.94□□□□□ -0.18
CHKB-209ENST00000481673 PAX4O43316 350 aa13.93□□□□□ -0.18
CHKB-209ENST00000481673 LINC00242Q5T6M2 205 aa13.93□□□□□ -0.18
CHKB-209ENST00000481673 NHP2Q9NX24 153 aaKnown RBP13.93□□□□□ -0.18
CHKB-209ENST00000481673 A0A1B0GWB2 263 aa13.92□□□□□ -0.18
CHKB-209ENST00000481673 CHCHD5Q9BSY4 110 aa13.92□□□□□ -0.18
CHKB-209ENST00000481673 CDKN2A-AS1Q9UH64 79 aa13.91□□□□□ -0.18
CHKB-209ENST00000481673 TMEM238C9JI98 176 aa13.91□□□□□ -0.18
CHKB-209ENST00000481673 C12orf74Q32Q52 190 aa13.91□□□□□ -0.18
CHKB-209ENST00000481673 PRIMA1Q86XR5 153 aa13.91□□□□□ -0.18
CHKB-209ENST00000481673 IGHV3-64A0A075B6Q5 118 aa13.9□□□□□ -0.18
CHKB-209ENST00000481673 TRAV26-1A0A087WT03 109 aa13.9□□□□□ -0.18
CHKB-209ENST00000481673 K7EP13 123 aa13.9□□□□□ -0.18
CHKB-209ENST00000481673 KRTAP10-11P60412 298 aa13.9□□□□□ -0.18
CHKB-209ENST00000481673 SH2D6Q7Z4S9 175 aa13.89□□□□□ -0.19
CHKB-209ENST00000481673 RAB37Q96AX2 223 aa13.89□□□□□ -0.19
CHKB-209ENST00000481673 BAHCC1Q9P281 2608 aa13.89□□□□□ -0.19
CHKB-209ENST00000481673 TRAV8-3A0A0A6YYJ7 113 aa13.89□□□□□ -0.19
CHKB-209ENST00000481673 TRAV13-1A0A0B4J241 112 aa13.89□□□□□ -0.19
CHKB-209ENST00000481673 H3BUT2 72 aa13.89□□□□□ -0.19
CHKB-209ENST00000481673 ZFAND6Q6FIF0 208 aa13.89□□□□□ -0.19
CHKB-209ENST00000481673 NDUFA12Q9UI09 145 aa13.89□□□□□ -0.19
CHKB-209ENST00000481673 NBEAL2Q6ZNJ1 2754 aa13.88□□□□□ -0.19
CHKB-209ENST00000481673 IGLV5-39A0A0G2JS06 123 aa13.88□□□□□ -0.19
CHKB-209ENST00000481673 A0A1B0GUV1 79 aa13.88□□□□□ -0.19
CHKB-209ENST00000481673 SPINK8P0C7L1 97 aa13.88□□□□□ -0.19
CHKB-209ENST00000481673 GAGE6Q13070 117 aa13.88□□□□□ -0.19
CHKB-209ENST00000481673 GTF2H5Q6ZYL4 71 aa13.88□□□□□ -0.19
CHKB-209ENST00000481673 DEFB4AO15263 64 aa13.87□□□□□ -0.19
CHKB-209ENST00000481673 IGHV3-30P01768 117 aa13.87□□□□□ -0.19
CHKB-209ENST00000481673 IGHV3-30-5P0DP03 117 aa13.87□□□□□ -0.19
CHKB-209ENST00000481673 TRRAPQ9Y4A5 3859 aa13.87□□□□□ -0.19
CHKB-209ENST00000481673 A0A0J9YXY3 114 aa13.87□□□□□ -0.19
CHKB-209ENST00000481673 COX6A2Q02221 97 aa13.87□□□□□ -0.19
CHKB-209ENST00000481673 SAMD5Q5TGI4 173 aa13.87□□□□□ -0.19
CHKB-209ENST00000481673 A0A1W2PPM0 123 aa13.86□□□□□ -0.19
CHKB-209ENST00000481673 CCL25O15444 150 aa13.86□□□□□ -0.19
CHKB-209ENST00000481673 FABP2P12104 132 aa13.86□□□□□ -0.19
CHKB-209ENST00000481673 C10orf126Q8N4M7 172 aa13.86□□□□□ -0.19
CHKB-209ENST00000481673 GAGE10A6NGK3 116 aa13.85□□□□□ -0.19
CHKB-209ENST00000481673 TIMM17BO60830 172 aa13.84□□□□□ -0.19
CHKB-209ENST00000481673 CELA1Q9UNI1 258 aa13.84□□□□□ -0.19
CHKB-209ENST00000481673 FBN1P35555 2871 aaKnown RBP13.84□□□□□ -0.19
CHKB-209ENST00000481673 RPL24P83731 157 aaKnown RBP13.84□□□□□ -0.19
CHKB-209ENST00000481673 MRPL23Q16540 153 aaKnown RBP13.84□□□□□ -0.19
CHKB-209ENST00000481673 NDUFA1O15239 70 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms