RNA–Protein interactions for RNA: ENST00000481281.5

HDAC1-207, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-207ENST00000481281 C15orf56Q8N910 161 aa8.43□□□□□ -1.06
HDAC1-207ENST00000481281 CHCHD10Q8WYQ3 142 aaPredicted RBP8.43□□□□□ -1.06
HDAC1-207ENST00000481281 ANAPC16Q96DE5 110 aa8.43□□□□□ -1.06
HDAC1-207ENST00000481281 TMEM101Q96IK0 257 aa8.43□□□□□ -1.06
HDAC1-207ENST00000481281 KIR2DL4Q99706 377 aa8.43□□□□□ -1.06
HDAC1-207ENST00000481281 CHAC1Q9BUX1 264 aa8.43□□□□□ -1.06
HDAC1-207ENST00000481281 FAT1Q14517 4588 aa8.43□□□□□ -1.06
HDAC1-207ENST00000481281 D6R8Y8 96 aa8.42□□□□□ -1.06
HDAC1-207ENST00000481281 FAM229AH3BQW9 127 aa8.42□□□□□ -1.06
HDAC1-207ENST00000481281 TNFRSF6BO95407 300 aa8.42□□□□□ -1.06
HDAC1-207ENST00000481281 PPBPP02775 128 aa8.42□□□□□ -1.06
HDAC1-207ENST00000481281 MT-ND4LP03901 98 aa8.42□□□□□ -1.06
HDAC1-207ENST00000481281 UQCC3Q6UW78 93 aa8.42□□□□□ -1.06
HDAC1-207ENST00000481281 CDC42SE2Q9NRR3 84 aa8.42□□□□□ -1.06
HDAC1-207ENST00000481281 CSDC2Q9Y534 153 aaKnown RBP8.42□□□□□ -1.06
HDAC1-207ENST00000481281 LINC00959A0A1B0GUT2 108 aa8.41□□□□□ -1.06
HDAC1-207ENST00000481281 hDV102S1A0JD36 115 aa8.41□□□□□ -1.06
HDAC1-207ENST00000481281 PHOX2AO14813 284 aa8.41□□□□□ -1.06
HDAC1-207ENST00000481281 NPYP01303 97 aa8.41□□□□□ -1.06
HDAC1-207ENST00000481281 ADCYAP1P18509 176 aa8.41□□□□□ -1.06
HDAC1-207ENST00000481281 SMIM2Q9BVW6 85 aa8.41□□□□□ -1.06
HDAC1-207ENST00000481281 UBE2D4Q9Y2X8 147 aa8.41□□□□□ -1.06
HDAC1-207ENST00000481281 SLPIP03973 132 aa8.4□□□□□ -1.06
HDAC1-207ENST00000481281 FOXI1Q12951 378 aa8.4□□□□□ -1.06
HDAC1-207ENST00000481281 ZNF664Q8N3J9 261 aa8.4□□□□□ -1.06
HDAC1-207ENST00000481281 CIRBP-AS1Q8TBR5 109 aa8.4□□□□□ -1.06
HDAC1-207ENST00000481281 TCAPO15273 167 aa8.39□□□□□ -1.07
HDAC1-207ENST00000481281 INAFM2P0DMQ5 153 aa8.39□□□□□ -1.07
HDAC1-207ENST00000481281 SMAGPQ0VAQ4 97 aa8.39□□□□□ -1.07
HDAC1-207ENST00000481281 CFAP161Q6P656 301 aa8.39□□□□□ -1.07
HDAC1-207ENST00000481281 SDIM1Q6ZPB5 146 aa8.39□□□□□ -1.07
HDAC1-207ENST00000481281 ORMDL3Q8N138 153 aa8.39□□□□□ -1.07
HDAC1-207ENST00000481281 LINC00528Q8N1L1 170 aa8.39□□□□□ -1.07
HDAC1-207ENST00000481281 TIMM21Q9BVV7 248 aa8.39□□□□□ -1.07
HDAC1-207ENST00000481281 AP5S1Q9NUS5 200 aa8.39□□□□□ -1.07
HDAC1-207ENST00000481281 GVQW2A0A096LPI5 108 aaPredicted RBP8.38□□□□□ -1.07
HDAC1-207ENST00000481281 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.38□□□□□ -1.07
HDAC1-207ENST00000481281 TMEM218A2RU14 115 aa8.38□□□□□ -1.07
HDAC1-207ENST00000481281 CCL25O15444 150 aa8.38□□□□□ -1.07
HDAC1-207ENST00000481281 XCL1P47992 114 aa8.38□□□□□ -1.07
HDAC1-207ENST00000481281 SS18Q15532 418 aa8.37□□□□□ -1.07
HDAC1-207ENST00000481281 TMEM136Q6ZRR5 245 aa8.37□□□□□ -1.07
HDAC1-207ENST00000481281 TMEM18Q96B42 140 aa8.37□□□□□ -1.07
HDAC1-207ENST00000481281 PRELID3AQ96N28 172 aa8.37□□□□□ -1.07
HDAC1-207ENST00000481281 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.37□□□□□ -1.07
HDAC1-207ENST00000481281 SRRM2Q9UQ35 2752 aaKnown RBP8.36□□□□□ -1.07
HDAC1-207ENST00000481281 PANO1I0J062 215 aa8.36□□□□□ -1.07
HDAC1-207ENST00000481281 PLA2G1BP04054 148 aaKnown RBP8.36□□□□□ -1.07
HDAC1-207ENST00000481281 CIRBPQ14011 172 aaKnown RBP8.36□□□□□ -1.07
HDAC1-207ENST00000481281 HIGD2BQ4VC39 106 aa8.36□□□□□ -1.07
HDAC1-207ENST00000481281 CD164L2Q6UWJ8 174 aa8.36□□□□□ -1.07
HDAC1-207ENST00000481281 Q6ZUT4 128 aa8.36□□□□□ -1.07
HDAC1-207ENST00000481281 IMMP2LQ96T52 175 aa8.36□□□□□ -1.07
HDAC1-207ENST00000481281 LAMTOR2Q9Y2Q5 125 aa8.36□□□□□ -1.07
HDAC1-207ENST00000481281 VPS13BQ7Z7G8 4022 aa8.35□□□□□ -1.07
HDAC1-207ENST00000481281 IGHV3-64A0A075B6Q5 118 aa8.35□□□□□ -1.07
HDAC1-207ENST00000481281 PRSS47A8MTI9 375 aa8.35□□□□□ -1.07
HDAC1-207ENST00000481281 RPL39P62891 51 aaKnown RBP8.35□□□□□ -1.07
HDAC1-207ENST00000481281 RNASE13Q5GAN3 156 aaKnown RBP8.35□□□□□ -1.07
HDAC1-207ENST00000481281 FAM104AQ969W3 186 aa8.35□□□□□ -1.07
HDAC1-207ENST00000481281 SEC11CQ9BY50 192 aa8.35□□□□□ -1.07
HDAC1-207ENST00000481281 SPANXA1Q9NS26 97 aa8.35□□□□□ -1.07
HDAC1-207ENST00000481281 IGHV1-58A0A0C4DH39 117 aa8.34□□□□□ -1.07
HDAC1-207ENST00000481281 C1orf196B1AJZ1 125 aa8.34□□□□□ -1.07
HDAC1-207ENST00000481281 COMMD7Q86VX2 200 aa8.34□□□□□ -1.07
HDAC1-207ENST00000481281 CTDSP1Q9GZU7 261 aa8.34□□□□□ -1.07
HDAC1-207ENST00000481281 FLG2Q5D862 2391 aaPredicted RBP8.33□□□□□ -1.08
HDAC1-207ENST00000481281 KRTAP10-4P60372 401 aaPredicted RBP8.33□□□□□ -1.08
HDAC1-207ENST00000481281 MRPS36P82909 103 aaKnown RBP8.33□□□□□ -1.08
HDAC1-207ENST00000481281 TRAV9-1A0A075B6T8 112 aa8.32□□□□□ -1.08
HDAC1-207ENST00000481281 TRAV13-1A0A0B4J241 112 aa8.32□□□□□ -1.08
HDAC1-207ENST00000481281 RAB5AP20339 215 aa8.32□□□□□ -1.08
HDAC1-207ENST00000481281 MAP1LC3AQ9H492 121 aa8.32□□□□□ -1.08
HDAC1-207ENST00000481281 COX7A2LO14548 114 aa8.31□□□□□ -1.08
HDAC1-207ENST00000481281 C10orf91Q5T1B1 145 aa8.31□□□□□ -1.08
HDAC1-207ENST00000481281 SPACA4Q8TDM5 124 aa8.31□□□□□ -1.08
HDAC1-207ENST00000481281 LOC389332A0A1B0GUA5 103 aa8.3□□□□□ -1.08
HDAC1-207ENST00000481281 CHTF8P0CG12 524 aa8.3□□□□□ -1.08
HDAC1-207ENST00000481281 COX6A2Q02221 97 aa8.3□□□□□ -1.08
HDAC1-207ENST00000481281 Q8N8P6 123 aa8.3□□□□□ -1.08
HDAC1-207ENST00000481281 LINC00526Q96FQ7 95 aa8.3□□□□□ -1.08
HDAC1-207ENST00000481281 OPRPNQ99935 248 aaPredicted RBP8.3□□□□□ -1.08
HDAC1-207ENST00000481281 CARHSP1Q9Y2V2 147 aaKnown RBP8.3□□□□□ -1.08
HDAC1-207ENST00000481281 PYGO1Q9Y3Y4 419 aa8.3□□□□□ -1.08
HDAC1-207ENST00000481281 IFI27P40305 119 aaPredicted RBP8.29□□□□□ -1.08
HDAC1-207ENST00000481281 PRSS3P2Q8NHM4 247 aa8.29□□□□□ -1.08
HDAC1-207ENST00000481281 A0A087WYN8 130 aa8.28□□□□□ -1.08
HDAC1-207ENST00000481281 ZNF561-AS1K7EIQ3 104 aa8.28□□□□□ -1.08
HDAC1-207ENST00000481281 K7EMI3 77 aa8.28□□□□□ -1.08
HDAC1-207ENST00000481281 MALP21145 153 aa8.28□□□□□ -1.08
HDAC1-207ENST00000481281 CARD19Q96LW7 228 aa8.28□□□□□ -1.08
HDAC1-207ENST00000481281 DMBT1Q9UGM3 2413 aaPredicted RBP8.27□□□□□ -1.09
HDAC1-207ENST00000481281 MYCBP2O75592 4640 aa8.27□□□□□ -1.09
HDAC1-207ENST00000481281 IGLV4-69A0A075B6H9 119 aa8.27□□□□□ -1.09
HDAC1-207ENST00000481281 IGLV4-3A0A075B6K6 122 aa8.27□□□□□ -1.09
HDAC1-207ENST00000481281 IGHV3OR16-9A0A0B4J2B5 98 aa8.27□□□□□ -1.09
HDAC1-207ENST00000481281 IFITM10A6NMD0 228 aa8.27□□□□□ -1.09
HDAC1-207ENST00000481281 S100PP25815 95 aa8.27□□□□□ -1.09
HDAC1-207ENST00000481281 SYCNQ0VAF6 134 aa8.27□□□□□ -1.09
HDAC1-207ENST00000481281 C5orf38Q86SI9 138 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 110.6 ms