RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 ORMDL3Q8N138 153 aa10.23□□□□□ -0.77
C9orf3-217ENST00000479161 CSDC2Q9Y534 153 aaKnown RBP10.23□□□□□ -0.77
C9orf3-217ENST00000479161 D6R8Y8 96 aa10.22□□□□□ -0.77
C9orf3-217ENST00000479161 SNRPEP62304 92 aaKnown RBP10.22□□□□□ -0.77
C9orf3-217ENST00000479161 KRTAP26-1Q6PEX3 210 aa10.22□□□□□ -0.77
C9orf3-217ENST00000479161 RYR1P21817 5038 aa10.21□□□□□ -0.77
C9orf3-217ENST00000479161 FGF6P10767 208 aa10.21□□□□□ -0.77
C9orf3-217ENST00000479161 C14orf177Q52M58 125 aa10.21□□□□□ -0.77
C9orf3-217ENST00000479161 AMMECR1LQ6DCA0 310 aa10.21□□□□□ -0.77
C9orf3-217ENST00000479161 TMEM136Q6ZRR5 245 aa10.21□□□□□ -0.77
C9orf3-217ENST00000479161 C12orf57Q99622 126 aa10.21□□□□□ -0.77
C9orf3-217ENST00000479161 FCER1GP30273 86 aa10.2□□□□□ -0.78
C9orf3-217ENST00000479161 COX19Q49B96 90 aa10.2□□□□□ -0.78
C9orf3-217ENST00000479161 TIMM21Q9BVV7 248 aa10.2□□□□□ -0.78
C9orf3-217ENST00000479161 SMIM2Q9BVW6 85 aa10.2□□□□□ -0.78
C9orf3-217ENST00000479161 S100PP25815 95 aa10.19□□□□□ -0.78
C9orf3-217ENST00000479161 FABP9Q0Z7S8 132 aa10.19□□□□□ -0.78
C9orf3-217ENST00000479161 DEFB104AQ8WTQ1 72 aa10.19□□□□□ -0.78
C9orf3-217ENST00000479161 BAALCQ8WXS3 180 aa10.19□□□□□ -0.78
C9orf3-217ENST00000479161 TMEM18Q96B42 140 aa10.19□□□□□ -0.78
C9orf3-217ENST00000479161 TMEM101Q96IK0 257 aa10.19□□□□□ -0.78
C9orf3-217ENST00000479161 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.18□□□□□ -0.78
C9orf3-217ENST00000479161 IGKV2-29A2NJV5 120 aaPredicted RBP10.18□□□□□ -0.78
C9orf3-217ENST00000479161 NPYP01303 97 aa10.18□□□□□ -0.78
C9orf3-217ENST00000479161 WFDC2Q14508 124 aa10.18□□□□□ -0.78
C9orf3-217ENST00000479161 OR5A1Q8NGJ0 315 aa10.18□□□□□ -0.78
C9orf3-217ENST00000479161 PRELID3AQ96N28 172 aa10.18□□□□□ -0.78
C9orf3-217ENST00000479161 IGLV5-52A0A0A0MRZ9 124 aa10.17□□□□□ -0.78
C9orf3-217ENST00000479161 K7EMI3 77 aa10.17□□□□□ -0.78
C9orf3-217ENST00000479161 CCL25O15444 150 aa10.17□□□□□ -0.78
C9orf3-217ENST00000479161 GCSHP23434 173 aa10.17□□□□□ -0.78
C9orf3-217ENST00000479161 RNASEKQ6P5S7 137 aaKnown RBP10.17□□□□□ -0.78
C9orf3-217ENST00000479161 GNB1LQ9BYB4 327 aa10.17□□□□□ -0.78
C9orf3-217ENST00000479161 CDC42SE2Q9NRR3 84 aa10.17□□□□□ -0.78
C9orf3-217ENST00000479161 APOBP04114 4563 aaKnown RBP10.16□□□□□ -0.78
C9orf3-217ENST00000479161 TGIF2-C20orf24A0A0A6YYL0 155 aa10.16□□□□□ -0.78
C9orf3-217ENST00000479161 HLA-DQA1P01909 254 aa10.16□□□□□ -0.78
C9orf3-217ENST00000479161 CLPSL2Q6UWE3 100 aa10.15□□□□□ -0.78
C9orf3-217ENST00000479161 ZNF664Q8N3J9 261 aa10.15□□□□□ -0.78
C9orf3-217ENST00000479161 UBE2D4Q9Y2X8 147 aa10.15□□□□□ -0.78
C9orf3-217ENST00000479161 HSPG2P98160 4391 aa10.15□□□□□ -0.78
C9orf3-217ENST00000479161 HIST1H2BKO60814 126 aa10.14□□□□□ -0.79
C9orf3-217ENST00000479161 MT-ND6P03923 174 aa10.14□□□□□ -0.79
C9orf3-217ENST00000479161 HIST1H2BJP06899 126 aa10.14□□□□□ -0.79
C9orf3-217ENST00000479161 HIST1H2BOP23527 126 aa10.14□□□□□ -0.79
C9orf3-217ENST00000479161 HIST1H2BBP33778 126 aa10.14□□□□□ -0.79
C9orf3-217ENST00000479161 HIST1H2BDP58876 126 aa10.14□□□□□ -0.79
C9orf3-217ENST00000479161 HIST1H2BCP62807 126 aa10.14□□□□□ -0.79
C9orf3-217ENST00000479161 HIST2H2BEQ16778 126 aa10.14□□□□□ -0.79
C9orf3-217ENST00000479161 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.14□□□□□ -0.79
C9orf3-217ENST00000479161 DGAT2L7PQ6IED9 249 aa10.14□□□□□ -0.79
C9orf3-217ENST00000479161 HIST1H2BHQ93079 126 aa10.14□□□□□ -0.79
C9orf3-217ENST00000479161 HIST1H2BNQ99877 126 aa10.14□□□□□ -0.79
C9orf3-217ENST00000479161 HIST1H2BMQ99879 126 aa10.14□□□□□ -0.79
C9orf3-217ENST00000479161 MAP1LC3AQ9H492 121 aa10.14□□□□□ -0.79
C9orf3-217ENST00000479161 USP17L23D6RBM5 183 aa10.13□□□□□ -0.79
C9orf3-217ENST00000479161 LECT2O14960 151 aa10.13□□□□□ -0.79
C9orf3-217ENST00000479161 SPANXA1Q9NS26 97 aa10.13□□□□□ -0.79
C9orf3-217ENST00000479161 IGLV10-54A0A075B6I4 117 aa10.12□□□□□ -0.79
C9orf3-217ENST00000479161 TRGC2P03986 189 aa10.12□□□□□ -0.79
C9orf3-217ENST00000479161 S100A2P29034 98 aa10.12□□□□□ -0.79
C9orf3-217ENST00000479161 KRTAP10-1P60331 282 aa10.12□□□□□ -0.79
C9orf3-217ENST00000479161 MRPS36P82909 103 aaKnown RBP10.12□□□□□ -0.79
C9orf3-217ENST00000479161 Q8N8P6 123 aa10.12□□□□□ -0.79
C9orf3-217ENST00000479161 NXT2Q9NPJ8 142 aaKnown RBP10.12□□□□□ -0.79
C9orf3-217ENST00000479161 LINC00959A0A1B0GUT2 108 aa10.11□□□□□ -0.79
C9orf3-217ENST00000479161 NDUFA6P56556 154 aa10.11□□□□□ -0.79
C9orf3-217ENST00000479161 COA6Q5JTJ3 125 aaKnown RBP10.11□□□□□ -0.79
C9orf3-217ENST00000479161 CFAP161Q6P656 301 aa10.11□□□□□ -0.79
C9orf3-217ENST00000479161 CHCHD10Q8WYQ3 142 aaPredicted RBP10.11□□□□□ -0.79
C9orf3-217ENST00000479161 PYGO1Q9Y3Y4 419 aa10.11□□□□□ -0.79
C9orf3-217ENST00000479161 DNAH8Q96JB1 4490 aa10.1□□□□□ -0.79
C9orf3-217ENST00000479161 NPSP0C0P6 89 aa10.1□□□□□ -0.79
C9orf3-217ENST00000479161 G0S2P27469 103 aa10.1□□□□□ -0.79
C9orf3-217ENST00000479161 SS18Q15532 418 aa10.1□□□□□ -0.79
C9orf3-217ENST00000479161 PRSS1P07477 247 aa10.09□□□□□ -0.79
C9orf3-217ENST00000479161 FUSP35637 526 aaKnown RBP eCLIP10.09□□□□□ -0.79
C9orf3-217ENST00000479161 CNBPP62633 177 aaKnown RBP10.09□□□□□ -0.79
C9orf3-217ENST00000479161 ORMDL2Q53FV1 153 aa10.09□□□□□ -0.79
C9orf3-217ENST00000479161 Q6ZSA8 131 aa10.09□□□□□ -0.79
C9orf3-217ENST00000479161 HIST3H2BBQ8N257 126 aa10.09□□□□□ -0.79
C9orf3-217ENST00000479161 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.08□□□□□ -0.8
C9orf3-217ENST00000479161 GAGE12HA6NDE8 117 aa10.08□□□□□ -0.8
C9orf3-217ENST00000479161 FOXI1Q12951 378 aa10.08□□□□□ -0.8
C9orf3-217ENST00000479161 CD164L2Q6UWJ8 174 aa10.08□□□□□ -0.8
C9orf3-217ENST00000479161 XGP55808 180 aa10.07□□□□□ -0.8
C9orf3-217ENST00000479161 RPL39P62891 51 aaKnown RBP10.07□□□□□ -0.8
C9orf3-217ENST00000479161 C9orf163Q8N9P6 203 aa10.07□□□□□ -0.8
C9orf3-217ENST00000479161 FAM104AQ969W3 186 aa10.07□□□□□ -0.8
C9orf3-217ENST00000479161 IGKV3OR2-268A0A0C4DH90 116 aa10.06□□□□□ -0.8
C9orf3-217ENST00000479161 LOC389332A0A1B0GUA5 103 aa10.06□□□□□ -0.8
C9orf3-217ENST00000479161 LINC01546A6NGU7 62 aa10.06□□□□□ -0.8
C9orf3-217ENST00000479161 LINC01549A6NIU2 74 aa10.06□□□□□ -0.8
C9orf3-217ENST00000479161 PCP4L1A6NKN8 68 aa10.06□□□□□ -0.8
C9orf3-217ENST00000479161 CTAG1AP78358 180 aa10.06□□□□□ -0.8
C9orf3-217ENST00000479161 ALKBH7Q9BT30 221 aaPredicted RBP10.06□□□□□ -0.8
C9orf3-217ENST00000479161 ABCA13Q86UQ4 5058 aa10.06□□□□□ -0.8
C9orf3-217ENST00000479161 IFITM10A6NMD0 228 aa10.05□□□□□ -0.8
C9orf3-217ENST00000479161 IFI27P40305 119 aaPredicted RBP10.05□□□□□ -0.8
C9orf3-217ENST00000479161 C15orf56Q8N910 161 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 165.4 ms