RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 TMEM101Q96IK0 257 aa13.99□□□□□ -0.17
COL9A3-211ENST00000477612 C7orf77A4D0Y5 90 aa13.98□□□□□ -0.17
COL9A3-211ENST00000477612 CDC42SE2Q9NRR3 84 aa13.98□□□□□ -0.17
COL9A3-211ENST00000477612 AP5S1Q9NUS5 200 aa13.98□□□□□ -0.17
COL9A3-211ENST00000477612 A0A1B0GXF2 115 aa13.97□□□□□ -0.17
COL9A3-211ENST00000477612 CAMPP49913 170 aa13.97□□□□□ -0.17
COL9A3-211ENST00000477612 LINC00959A0A1B0GUT2 108 aa13.96□□□□□ -0.17
COL9A3-211ENST00000477612 KRTAP10-4P60372 401 aaPredicted RBP13.96□□□□□ -0.17
COL9A3-211ENST00000477612 RPL32P62910 135 aaKnown RBP13.96□□□□□ -0.17
COL9A3-211ENST00000477612 C20orf78Q9BR46 151 aa13.96□□□□□ -0.17
COL9A3-211ENST00000477612 CSDC2Q9Y534 153 aaKnown RBP13.96□□□□□ -0.17
COL9A3-211ENST00000477612 HERC1Q15751 4861 aa13.95□□□□□ -0.18
COL9A3-211ENST00000477612 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.95□□□□□ -0.18
COL9A3-211ENST00000477612 S100A8P05109 93 aa13.95□□□□□ -0.18
COL9A3-211ENST00000477612 FOXI1Q12951 378 aa13.95□□□□□ -0.18
COL9A3-211ENST00000477612 CIRBPQ14011 172 aaKnown RBP13.95□□□□□ -0.18
COL9A3-211ENST00000477612 KIR2DL4Q99706 377 aa13.95□□□□□ -0.18
COL9A3-211ENST00000477612 HBBP68871 147 aa13.94□□□□□ -0.18
COL9A3-211ENST00000477612 ZNF664Q8N3J9 261 aa13.94□□□□□ -0.18
COL9A3-211ENST00000477612 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.94□□□□□ -0.18
COL9A3-211ENST00000477612 F8W036 122 aa13.93□□□□□ -0.18
COL9A3-211ENST00000477612 PANO1I0J062 215 aa13.93□□□□□ -0.18
COL9A3-211ENST00000477612 FCER1GP30273 86 aa13.93□□□□□ -0.18
COL9A3-211ENST00000477612 CKS2P33552 79 aa13.93□□□□□ -0.18
COL9A3-211ENST00000477612 RAB14P61106 215 aa13.93□□□□□ -0.18
COL9A3-211ENST00000477612 PNRC1Q12796 327 aaPredicted RBP13.93□□□□□ -0.18
COL9A3-211ENST00000477612 MRPL54Q6P161 138 aaKnown RBP13.93□□□□□ -0.18
COL9A3-211ENST00000477612 IGHV3-64A0A075B6Q5 118 aa13.92□□□□□ -0.18
COL9A3-211ENST00000477612 GVQW2A0A096LPI5 108 aaPredicted RBP13.92□□□□□ -0.18
COL9A3-211ENST00000477612 SMAGPQ0VAQ4 97 aa13.92□□□□□ -0.18
COL9A3-211ENST00000477612 ATP5L2Q7Z4Y8 100 aa13.92□□□□□ -0.18
COL9A3-211ENST00000477612 UBE2D4Q9Y2X8 147 aa13.92□□□□□ -0.18
COL9A3-211ENST00000477612 CCL25O15444 150 aa13.91□□□□□ -0.18
COL9A3-211ENST00000477612 TNFRSF6BO95407 300 aa13.91□□□□□ -0.18
COL9A3-211ENST00000477612 DMBT1Q9UGM3 2413 aaPredicted RBP13.91□□□□□ -0.18
COL9A3-211ENST00000477612 PHOX2AO14813 284 aa13.9□□□□□ -0.18
COL9A3-211ENST00000477612 TCAPO15273 167 aa13.9□□□□□ -0.18
COL9A3-211ENST00000477612 PPBPP02775 128 aa13.9□□□□□ -0.18
COL9A3-211ENST00000477612 SS18Q15532 418 aa13.9□□□□□ -0.18
COL9A3-211ENST00000477612 TIMM21Q9BVV7 248 aa13.9□□□□□ -0.18
COL9A3-211ENST00000477612 D6R8Y8 96 aa13.89□□□□□ -0.19
COL9A3-211ENST00000477612 XCL1P47992 114 aa13.89□□□□□ -0.19
COL9A3-211ENST00000477612 CLLU1Q5K131 121 aa13.89□□□□□ -0.19
COL9A3-211ENST00000477612 CD164L2Q6UWJ8 174 aa13.89□□□□□ -0.19
COL9A3-211ENST00000477612 HIGD2BQ4VC39 106 aa13.88□□□□□ -0.19
COL9A3-211ENST00000477612 TMEM18Q96B42 140 aa13.88□□□□□ -0.19
COL9A3-211ENST00000477612 ANAPC16Q96DE5 110 aa13.88□□□□□ -0.19
COL9A3-211ENST00000477612 SMIM2Q9BVW6 85 aa13.88□□□□□ -0.19
COL9A3-211ENST00000477612 IGHV1-58A0A0C4DH39 117 aa13.86□□□□□ -0.19
COL9A3-211ENST00000477612 NPYP01303 97 aa13.86□□□□□ -0.19
COL9A3-211ENST00000477612 C1orf196B1AJZ1 125 aa13.85□□□□□ -0.19
COL9A3-211ENST00000477612 SPACA4Q8TDM5 124 aa13.85□□□□□ -0.19
COL9A3-211ENST00000477612 MT-ND4LP03901 98 aa13.84□□□□□ -0.19
COL9A3-211ENST00000477612 ORMDL3Q8N138 153 aa13.84□□□□□ -0.19
COL9A3-211ENST00000477612 PKHD1L1Q86WI1 4243 aa13.84□□□□□ -0.19
COL9A3-211ENST00000477612 PRSS47A8MTI9 375 aa13.83□□□□□ -0.2
COL9A3-211ENST00000477612 KRTAP29-1A8MX34 341 aaPredicted RBP13.83□□□□□ -0.2
COL9A3-211ENST00000477612 TMEM136Q6ZRR5 245 aa13.83□□□□□ -0.2
COL9A3-211ENST00000477612 LRP1Q07954 4544 aaKnown RBP13.82□□□□□ -0.2
COL9A3-211ENST00000477612 FAT3Q8TDW7 4589 aa13.82□□□□□ -0.2
COL9A3-211ENST00000477612 COX6A2Q02221 97 aa13.82□□□□□ -0.2
COL9A3-211ENST00000477612 FAM104AQ969W3 186 aa13.82□□□□□ -0.2
COL9A3-211ENST00000477612 A0A087WYN8 130 aa13.81□□□□□ -0.2
COL9A3-211ENST00000477612 CHTF8P0CG12 524 aa13.81□□□□□ -0.2
COL9A3-211ENST00000477612 RPL37AP61513 92 aaKnown RBP13.81□□□□□ -0.2
COL9A3-211ENST00000477612 IFITM2Q01629 132 aa13.81□□□□□ -0.2
COL9A3-211ENST00000477612 Q6ZUT4 128 aa13.81□□□□□ -0.2
COL9A3-211ENST00000477612 PRSS3P2Q8NHM4 247 aa13.81□□□□□ -0.2
COL9A3-211ENST00000477612 RPL39P62891 51 aaKnown RBP13.8□□□□□ -0.2
COL9A3-211ENST00000477612 RNASE13Q5GAN3 156 aaKnown RBP13.8□□□□□ -0.2
COL9A3-211ENST00000477612 PRELID3AQ96N28 172 aa13.8□□□□□ -0.2
COL9A3-211ENST00000477612 PLAC8Q9NZF1 115 aa13.8□□□□□ -0.2
COL9A3-211ENST00000477612 LAMTOR2Q9Y2Q5 125 aa13.8□□□□□ -0.2
COL9A3-211ENST00000477612 MRPS36P82909 103 aaKnown RBP13.79□□□□□ -0.2
COL9A3-211ENST00000477612 UQCC3Q6UW78 93 aa13.79□□□□□ -0.2
COL9A3-211ENST00000477612 SPANXA1Q9NS26 97 aa13.79□□□□□ -0.2
COL9A3-211ENST00000477612 TRAV13-1A0A0B4J241 112 aa13.77□□□□□ -0.21
COL9A3-211ENST00000477612 ZNF561-AS1K7EIQ3 104 aa13.77□□□□□ -0.21
COL9A3-211ENST00000477612 COX7A2LO14548 114 aa13.77□□□□□ -0.21
COL9A3-211ENST00000477612 DPH3Q96FX2 82 aa13.77□□□□□ -0.21
COL9A3-211ENST00000477612 IMMP2LQ96T52 175 aa13.77□□□□□ -0.21
COL9A3-211ENST00000477612 ADCYAP1P18509 176 aa13.76□□□□□ -0.21
COL9A3-211ENST00000477612 LINC00526Q96FQ7 95 aa13.76□□□□□ -0.21
COL9A3-211ENST00000477612 PKIGQ9Y2B9 76 aa13.76□□□□□ -0.21
COL9A3-211ENST00000477612 TMEM218A2RU14 115 aa13.75□□□□□ -0.21
COL9A3-211ENST00000477612 CARD19Q96LW7 228 aa13.75□□□□□ -0.21
COL9A3-211ENST00000477612 PYGO1Q9Y3Y4 419 aa13.75□□□□□ -0.21
COL9A3-211ENST00000477612 J3QL48 77 aa13.74□□□□□ -0.21
COL9A3-211ENST00000477612 RAB5AP20339 215 aa13.74□□□□□ -0.21
COL9A3-211ENST00000477612 MALP21145 153 aa13.74□□□□□ -0.21
COL9A3-211ENST00000477612 SYCNQ0VAF6 134 aa13.74□□□□□ -0.21
COL9A3-211ENST00000477612 A0A096LNI7 61 aa13.73□□□□□ -0.21
COL9A3-211ENST00000477612 OPRPNQ99935 248 aaPredicted RBP13.73□□□□□ -0.21
COL9A3-211ENST00000477612 IGLV4-69A0A075B6H9 119 aa13.72□□□□□ -0.21
COL9A3-211ENST00000477612 IGHV3OR16-9A0A0B4J2B5 98 aa13.72□□□□□ -0.21
COL9A3-211ENST00000477612 OXTP01178 125 aa13.72□□□□□ -0.21
COL9A3-211ENST00000477612 HNRNPA3P51991 378 aaKnown RBP13.72□□□□□ -0.21
COL9A3-211ENST00000477612 MAJINQ3KP22 176 aa13.72□□□□□ -0.21
COL9A3-211ENST00000477612 C2orf48Q96LS8 159 aa13.72□□□□□ -0.21
COL9A3-211ENST00000477612 CTDSP1Q9GZU7 261 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms