RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 TNFRSF6BO95407 300 aa15.59■□□□□ 0.09
CPNE1-223ENST00000475146 TRBV24-1A0A075B6N3 115 aa15.58■□□□□ 0.08
CPNE1-223ENST00000475146 MRPL52Q86TS9 123 aaKnown RBP15.58■□□□□ 0.08
CPNE1-223ENST00000475146 UQCC3Q6UW78 93 aa15.57■□□□□ 0.08
CPNE1-223ENST00000475146 AP5S1Q9NUS5 200 aa15.57■□□□□ 0.08
CPNE1-223ENST00000475146 SCXQ7RTU7 201 aa15.56■□□□□ 0.08
CPNE1-223ENST00000475146 NPYP01303 97 aa15.55■□□□□ 0.08
CPNE1-223ENST00000475146 PPBPP02775 128 aa15.55■□□□□ 0.08
CPNE1-223ENST00000475146 RPL32P62910 135 aaKnown RBP15.55■□□□□ 0.08
CPNE1-223ENST00000475146 SMAGPQ0VAQ4 97 aa15.55■□□□□ 0.08
CPNE1-223ENST00000475146 CFAP161Q6P656 301 aa15.55■□□□□ 0.08
CPNE1-223ENST00000475146 C9orf163Q8N9P6 203 aa15.55■□□□□ 0.08
CPNE1-223ENST00000475146 SMIM2Q9BVW6 85 aa15.55■□□□□ 0.08
CPNE1-223ENST00000475146 CDC42SE2Q9NRR3 84 aa15.55■□□□□ 0.08
CPNE1-223ENST00000475146 LINC00959A0A1B0GUT2 108 aa15.54■□□□□ 0.08
CPNE1-223ENST00000475146 XCL1P47992 114 aa15.54■□□□□ 0.08
CPNE1-223ENST00000475146 ORMDL3Q8N138 153 aa15.54■□□□□ 0.08
CPNE1-223ENST00000475146 ZNF664Q8N3J9 261 aa15.54■□□□□ 0.08
CPNE1-223ENST00000475146 CHAC1Q9BUX1 264 aa15.54■□□□□ 0.08
CPNE1-223ENST00000475146 ADCYAP1P18509 176 aa15.53■□□□□ 0.08
CPNE1-223ENST00000475146 C15orf56Q8N910 161 aa15.53■□□□□ 0.08
CPNE1-223ENST00000475146 TMEM18Q96B42 140 aa15.53■□□□□ 0.08
CPNE1-223ENST00000475146 TMEM218A2RU14 115 aa15.52■□□□□ 0.08
CPNE1-223ENST00000475146 PHOX2AO14813 284 aa15.52■□□□□ 0.08
CPNE1-223ENST00000475146 TCAPO15273 167 aa15.52■□□□□ 0.08
CPNE1-223ENST00000475146 CCL25O15444 150 aa15.52■□□□□ 0.08
CPNE1-223ENST00000475146 CNBPP62633 177 aaKnown RBP15.52■□□□□ 0.08
CPNE1-223ENST00000475146 SS18Q15532 418 aa15.52■□□□□ 0.08
CPNE1-223ENST00000475146 TMEM136Q6ZRR5 245 aa15.52■□□□□ 0.08
CPNE1-223ENST00000475146 UBE2D4Q9Y2X8 147 aa15.52■□□□□ 0.08
CPNE1-223ENST00000475146 DNAH8Q96JB1 4490 aa15.51■□□□□ 0.07
CPNE1-223ENST00000475146 INAFM2P0DMQ5 153 aa15.51■□□□□ 0.07
CPNE1-223ENST00000475146 FOXI1Q12951 378 aa15.51■□□□□ 0.07
CPNE1-223ENST00000475146 HIGD2BQ4VC39 106 aa15.51■□□□□ 0.07
CPNE1-223ENST00000475146 PRELID3AQ96N28 172 aa15.51■□□□□ 0.07
CPNE1-223ENST00000475146 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.5■□□□□ 0.07
CPNE1-223ENST00000475146 LINC00528Q8N1L1 170 aa15.5■□□□□ 0.07
CPNE1-223ENST00000475146 CSDC2Q9Y534 153 aaKnown RBP15.5■□□□□ 0.07
CPNE1-223ENST00000475146 FAT1Q14517 4588 aa15.49■□□□□ 0.07
CPNE1-223ENST00000475146 RNASE13Q5GAN3 156 aaKnown RBP15.49■□□□□ 0.07
CPNE1-223ENST00000475146 COMMD7Q86VX2 200 aa15.49■□□□□ 0.07
CPNE1-223ENST00000475146 CIRBP-AS1Q8TBR5 109 aa15.49■□□□□ 0.07
CPNE1-223ENST00000475146 SLPIP03973 132 aa15.47■□□□□ 0.07
CPNE1-223ENST00000475146 Q6ZUT4 128 aa15.47■□□□□ 0.07
CPNE1-223ENST00000475146 TIMM21Q9BVV7 248 aa15.47■□□□□ 0.07
CPNE1-223ENST00000475146 IGHV3-64A0A075B6Q5 118 aa15.46■□□□□ 0.07
CPNE1-223ENST00000475146 RPL39P62891 51 aaKnown RBP15.46■□□□□ 0.07
CPNE1-223ENST00000475146 SDIM1Q6ZPB5 146 aa15.46■□□□□ 0.07
CPNE1-223ENST00000475146 PLA2G1BP04054 148 aaKnown RBP15.45■□□□□ 0.06
CPNE1-223ENST00000475146 RAB5AP20339 215 aa15.45■□□□□ 0.06
CPNE1-223ENST00000475146 CD164L2Q6UWJ8 174 aa15.45■□□□□ 0.06
CPNE1-223ENST00000475146 IMMP2LQ96T52 175 aa15.45■□□□□ 0.06
CPNE1-223ENST00000475146 SEC11CQ9BY50 192 aa15.45■□□□□ 0.06
CPNE1-223ENST00000475146 CTDSP1Q9GZU7 261 aa15.45■□□□□ 0.06
CPNE1-223ENST00000475146 GVQW2A0A096LPI5 108 aaPredicted RBP15.44■□□□□ 0.06
CPNE1-223ENST00000475146 TRAV13-1A0A0B4J241 112 aa15.44■□□□□ 0.06
CPNE1-223ENST00000475146 LAMTOR2Q9Y2Q5 125 aa15.44■□□□□ 0.06
CPNE1-223ENST00000475146 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP15.44■□□□□ 0.06
CPNE1-223ENST00000475146 IGHV1-58A0A0C4DH39 117 aa15.43■□□□□ 0.06
CPNE1-223ENST00000475146 LOC389332A0A1B0GUA5 103 aa15.43■□□□□ 0.06
CPNE1-223ENST00000475146 C1orf196B1AJZ1 125 aa15.43■□□□□ 0.06
CPNE1-223ENST00000475146 MAP1LC3AQ9H492 121 aa15.43■□□□□ 0.06
CPNE1-223ENST00000475146 SPANXA1Q9NS26 97 aa15.42■□□□□ 0.06
CPNE1-223ENST00000475146 PANO1I0J062 215 aa15.4■□□□□ 0.06
CPNE1-223ENST00000475146 MALP21145 153 aa15.39■□□□□ 0.05
CPNE1-223ENST00000475146 COX7A2LO14548 114 aa15.38■□□□□ 0.05
CPNE1-223ENST00000475146 LINC00526Q96FQ7 95 aa15.38■□□□□ 0.05
CPNE1-223ENST00000475146 OPRPNQ99935 248 aaPredicted RBP15.38■□□□□ 0.05
CPNE1-223ENST00000475146 TRAV9-1A0A075B6T8 112 aa15.37■□□□□ 0.05
CPNE1-223ENST00000475146 PRSS47A8MTI9 375 aa15.37■□□□□ 0.05
CPNE1-223ENST00000475146 S100PP25815 95 aa15.37■□□□□ 0.05
CPNE1-223ENST00000475146 CHTF8P0CG12 524 aa15.36■□□□□ 0.05
CPNE1-223ENST00000475146 IFI27P40305 119 aaPredicted RBP15.36■□□□□ 0.05
CPNE1-223ENST00000475146 MRPS36P82909 103 aaKnown RBP15.36■□□□□ 0.05
CPNE1-223ENST00000475146 Q8N8P6 123 aa15.36■□□□□ 0.05
CPNE1-223ENST00000475146 DPH3Q96FX2 82 aa15.36■□□□□ 0.05
CPNE1-223ENST00000475146 ZNF561-AS1K7EIQ3 104 aa15.35■□□□□ 0.05
CPNE1-223ENST00000475146 COX6A2Q02221 97 aa15.35■□□□□ 0.05
CPNE1-223ENST00000475146 FAM104AQ969W3 186 aa15.35■□□□□ 0.05
CPNE1-223ENST00000475146 IFITM10A6NMD0 228 aa15.34■□□□□ 0.05
CPNE1-223ENST00000475146 CIRBPQ14011 172 aaKnown RBP15.34■□□□□ 0.05
CPNE1-223ENST00000475146 C5orf38Q86SI9 138 aa15.34■□□□□ 0.05
CPNE1-223ENST00000475146 VPS13BQ7Z7G8 4022 aa15.33■□□□□ 0.05
CPNE1-223ENST00000475146 CARD19Q96LW7 228 aa15.33■□□□□ 0.04
CPNE1-223ENST00000475146 KIAA1644Q3SXP7 199 aa15.32■□□□□ 0.04
CPNE1-223ENST00000475146 C10orf91Q5T1B1 145 aa15.32■□□□□ 0.04
CPNE1-223ENST00000475146 PRSS3P2Q8NHM4 247 aa15.32■□□□□ 0.04
CPNE1-223ENST00000475146 SPACA4Q8TDM5 124 aa15.32■□□□□ 0.04
CPNE1-223ENST00000475146 CARHSP1Q9Y2V2 147 aaKnown RBP15.32■□□□□ 0.04
CPNE1-223ENST00000475146 CYSLTR1Q9Y271 337 aa15.31■□□□□ 0.04
CPNE1-223ENST00000475146 PYGO1Q9Y3Y4 419 aa15.31■□□□□ 0.04
CPNE1-223ENST00000475146 IGKV2-24A0A0C4DH68 120 aa15.3■□□□□ 0.04
CPNE1-223ENST00000475146 APOMO95445 188 aa15.3■□□□□ 0.04
CPNE1-223ENST00000475146 SYCNQ0VAF6 134 aa15.3■□□□□ 0.04
CPNE1-223ENST00000475146 RHEBQ15382 184 aa15.3■□□□□ 0.04
CPNE1-223ENST00000475146 ORMDL2Q53FV1 153 aa15.3■□□□□ 0.04
CPNE1-223ENST00000475146 NXT2Q9NPJ8 142 aaKnown RBP15.3■□□□□ 0.04
CPNE1-223ENST00000475146 RPS10P5Q9NQ39 176 aa15.3■□□□□ 0.04
CPNE1-223ENST00000475146 FLG2Q5D862 2391 aaPredicted RBP15.29■□□□□ 0.04
CPNE1-223ENST00000475146 IGLV4-69A0A075B6H9 119 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 163.2 ms