RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 SUMO2P61956 95 aaKnown RBP7.21□□□□□ -1.26
CKS1B-206ENST00000474215 MRPL51Q4U2R6 128 aaKnown RBP7.21□□□□□ -1.26
CKS1B-206ENST00000474215 OR5A1Q8NGJ0 315 aa7.21□□□□□ -1.26
CKS1B-206ENST00000474215 AP5S1Q9NUS5 200 aa7.21□□□□□ -1.26
CKS1B-206ENST00000474215 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.2□□□□□ -1.26
CKS1B-206ENST00000474215 C7orf77A4D0Y5 90 aa7.2□□□□□ -1.26
CKS1B-206ENST00000474215 F8W036 122 aa7.2□□□□□ -1.26
CKS1B-206ENST00000474215 PPP1R2P9O14990 202 aa7.2□□□□□ -1.26
CKS1B-206ENST00000474215 SLPIP03973 132 aa7.2□□□□□ -1.26
CKS1B-206ENST00000474215 S100A8P05109 93 aa7.2□□□□□ -1.26
CKS1B-206ENST00000474215 CKS2P33552 79 aa7.2□□□□□ -1.26
CKS1B-206ENST00000474215 HBBP68871 147 aa7.2□□□□□ -1.26
CKS1B-206ENST00000474215 KIR2DL4Q99706 377 aa7.2□□□□□ -1.26
CKS1B-206ENST00000474215 C20orf78Q9BR46 151 aa7.2□□□□□ -1.26
CKS1B-206ENST00000474215 CDC42SE2Q9NRR3 84 aa7.2□□□□□ -1.26
CKS1B-206ENST00000474215 DNAH8Q96JB1 4490 aa7.2□□□□□ -1.26
CKS1B-206ENST00000474215 VPS13BQ7Z7G8 4022 aa7.19□□□□□ -1.26
CKS1B-206ENST00000474215 TRBV24-1A0A075B6N3 115 aa7.19□□□□□ -1.26
CKS1B-206ENST00000474215 LINC00959A0A1B0GUT2 108 aa7.19□□□□□ -1.26
CKS1B-206ENST00000474215 FOXI1Q12951 378 aa7.19□□□□□ -1.26
CKS1B-206ENST00000474215 MRPL54Q6P161 138 aaKnown RBP7.19□□□□□ -1.26
CKS1B-206ENST00000474215 ZNF664Q8N3J9 261 aa7.19□□□□□ -1.26
CKS1B-206ENST00000474215 C15orf56Q8N910 161 aa7.19□□□□□ -1.26
CKS1B-206ENST00000474215 IGHV3-64A0A075B6Q5 118 aa7.18□□□□□ -1.26
CKS1B-206ENST00000474215 A0A1B0GXF2 115 aa7.18□□□□□ -1.26
CKS1B-206ENST00000474215 CCL25O15444 150 aa7.18□□□□□ -1.26
CKS1B-206ENST00000474215 TNFRSF6BO95407 300 aa7.18□□□□□ -1.26
CKS1B-206ENST00000474215 XCL1P47992 114 aa7.18□□□□□ -1.26
CKS1B-206ENST00000474215 SMAGPQ0VAQ4 97 aa7.18□□□□□ -1.26
CKS1B-206ENST00000474215 CSDC2Q9Y534 153 aaKnown RBP7.18□□□□□ -1.26
CKS1B-206ENST00000474215 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.18□□□□□ -1.26
CKS1B-206ENST00000474215 PANO1I0J062 215 aa7.17□□□□□ -1.26
CKS1B-206ENST00000474215 RPL32P62910 135 aaKnown RBP7.17□□□□□ -1.26
CKS1B-206ENST00000474215 PNRC1Q12796 327 aaPredicted RBP7.17□□□□□ -1.26
CKS1B-206ENST00000474215 SS18Q15532 418 aa7.17□□□□□ -1.26
CKS1B-206ENST00000474215 HIGD2BQ4VC39 106 aa7.17□□□□□ -1.26
CKS1B-206ENST00000474215 GVQW2A0A096LPI5 108 aaPredicted RBP7.16□□□□□ -1.26
CKS1B-206ENST00000474215 D6R8Y8 96 aa7.16□□□□□ -1.26
CKS1B-206ENST00000474215 TCAPO15273 167 aa7.16□□□□□ -1.26
CKS1B-206ENST00000474215 PPBPP02775 128 aa7.16□□□□□ -1.26
CKS1B-206ENST00000474215 MT-ND4LP03901 98 aa7.16□□□□□ -1.26
CKS1B-206ENST00000474215 CLLU1Q5K131 121 aa7.16□□□□□ -1.26
CKS1B-206ENST00000474215 ATP5L2Q7Z4Y8 100 aa7.16□□□□□ -1.26
CKS1B-206ENST00000474215 DPH3Q96FX2 82 aa7.16□□□□□ -1.26
CKS1B-206ENST00000474215 UBE2D4Q9Y2X8 147 aa7.16□□□□□ -1.26
CKS1B-206ENST00000474215 C1orf196B1AJZ1 125 aa7.15□□□□□ -1.26
CKS1B-206ENST00000474215 PHOX2AO14813 284 aa7.15□□□□□ -1.26
CKS1B-206ENST00000474215 NPYP01303 97 aa7.15□□□□□ -1.26
CKS1B-206ENST00000474215 KRTAP10-4P60372 401 aaPredicted RBP7.15□□□□□ -1.26
CKS1B-206ENST00000474215 CIRBPQ14011 172 aaKnown RBP7.15□□□□□ -1.26
CKS1B-206ENST00000474215 LCE2CQ5TA81 110 aa7.15□□□□□ -1.26
CKS1B-206ENST00000474215 CD164L2Q6UWJ8 174 aa7.15□□□□□ -1.26
CKS1B-206ENST00000474215 TMEM18Q96B42 140 aa7.15□□□□□ -1.26
CKS1B-206ENST00000474215 ANAPC16Q96DE5 110 aa7.15□□□□□ -1.26
CKS1B-206ENST00000474215 TIMM21Q9BVV7 248 aa7.15□□□□□ -1.26
CKS1B-206ENST00000474215 SMIM2Q9BVW6 85 aa7.15□□□□□ -1.26
CKS1B-206ENST00000474215 IGHV1-58A0A0C4DH39 117 aa7.14□□□□□ -1.27
CKS1B-206ENST00000474215 HERC1Q15751 4861 aa7.14□□□□□ -1.27
CKS1B-206ENST00000474215 TMEM136Q6ZRR5 245 aa7.14□□□□□ -1.27
CKS1B-206ENST00000474215 ORMDL3Q8N138 153 aa7.14□□□□□ -1.27
CKS1B-206ENST00000474215 MYCBP2O75592 4640 aa7.13□□□□□ -1.27
CKS1B-206ENST00000474215 COX6A2Q02221 97 aa7.13□□□□□ -1.27
CKS1B-206ENST00000474215 PRELID3AQ96N28 172 aa7.13□□□□□ -1.27
CKS1B-206ENST00000474215 FLG2Q5D862 2391 aaPredicted RBP7.13□□□□□ -1.27
CKS1B-206ENST00000474215 TRAV13-1A0A0B4J241 112 aa7.12□□□□□ -1.27
CKS1B-206ENST00000474215 CHTF8P0CG12 524 aa7.12□□□□□ -1.27
CKS1B-206ENST00000474215 RPL37AP61513 92 aaKnown RBP7.12□□□□□ -1.27
CKS1B-206ENST00000474215 RPL39P62891 51 aaKnown RBP7.12□□□□□ -1.27
CKS1B-206ENST00000474215 IFITM2Q01629 132 aa7.12□□□□□ -1.27
CKS1B-206ENST00000474215 C4orf48Q5BLP8 95 aa7.12□□□□□ -1.27
CKS1B-206ENST00000474215 RNASE13Q5GAN3 156 aaKnown RBP7.12□□□□□ -1.27
CKS1B-206ENST00000474215 PRSS3P2Q8NHM4 247 aa7.12□□□□□ -1.27
CKS1B-206ENST00000474215 SPACA4Q8TDM5 124 aa7.12□□□□□ -1.27
CKS1B-206ENST00000474215 DMBT1Q9UGM3 2413 aaPredicted RBP7.12□□□□□ -1.27
CKS1B-206ENST00000474215 A0A087WYN8 130 aa7.11□□□□□ -1.27
CKS1B-206ENST00000474215 ZNF561-AS1K7EIQ3 104 aa7.11□□□□□ -1.27
CKS1B-206ENST00000474215 COX7A2LO14548 114 aa7.11□□□□□ -1.27
CKS1B-206ENST00000474215 RAB5AP20339 215 aa7.11□□□□□ -1.27
CKS1B-206ENST00000474215 MALP21145 153 aa7.11□□□□□ -1.27
CKS1B-206ENST00000474215 Q6ZUT4 128 aa7.11□□□□□ -1.27
CKS1B-206ENST00000474215 LINC00526Q96FQ7 95 aa7.11□□□□□ -1.27
CKS1B-206ENST00000474215 SPANXA1Q9NS26 97 aa7.11□□□□□ -1.27
CKS1B-206ENST00000474215 PRSS47A8MTI9 375 aa7.1□□□□□ -1.27
CKS1B-206ENST00000474215 UQCC3Q6UW78 93 aa7.1□□□□□ -1.27
CKS1B-206ENST00000474215 FAM104AQ969W3 186 aa7.1□□□□□ -1.27
CKS1B-206ENST00000474215 PLAC8Q9NZF1 115 aa7.1□□□□□ -1.27
CKS1B-206ENST00000474215 LAMTOR2Q9Y2Q5 125 aa7.1□□□□□ -1.27
CKS1B-206ENST00000474215 TMEM218A2RU14 115 aa7.09□□□□□ -1.27
CKS1B-206ENST00000474215 KRTAP29-1A8MX34 341 aaPredicted RBP7.09□□□□□ -1.27
CKS1B-206ENST00000474215 MRPS36P82909 103 aaKnown RBP7.09□□□□□ -1.27
CKS1B-206ENST00000474215 SYCNQ0VAF6 134 aa7.09□□□□□ -1.27
CKS1B-206ENST00000474215 MAJINQ3KP22 176 aa7.09□□□□□ -1.27
CKS1B-206ENST00000474215 CARD19Q96LW7 228 aa7.09□□□□□ -1.27
CKS1B-206ENST00000474215 IMMP2LQ96T52 175 aa7.09□□□□□ -1.27
CKS1B-206ENST00000474215 OPRPNQ99935 248 aaPredicted RBP7.09□□□□□ -1.27
CKS1B-206ENST00000474215 IGLV4-69A0A075B6H9 119 aa7.08□□□□□ -1.28
CKS1B-206ENST00000474215 IGKV2-24A0A0C4DH68 120 aa7.08□□□□□ -1.28
CKS1B-206ENST00000474215 LOC389332A0A1B0GUA5 103 aa7.08□□□□□ -1.28
CKS1B-206ENST00000474215 C5orf38Q86SI9 138 aa7.08□□□□□ -1.28
CKS1B-206ENST00000474215 MAP1LC3AQ9H492 121 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms