RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 FAM168BA1KXE4 195 aa3.89□□□□□ -1.79
RTF1-203ENST00000473214 TMEM235A6NFC5 223 aa3.89□□□□□ -1.79
RTF1-203ENST00000473214 H3BQ85 93 aa3.89□□□□□ -1.79
RTF1-203ENST00000473214 H3BRM9 83 aa3.89□□□□□ -1.79
RTF1-203ENST00000473214 H7C2G1 150 aa3.89□□□□□ -1.79
RTF1-203ENST00000473214 ZNF22P17026 224 aaPredicted RBP3.89□□□□□ -1.79
RTF1-203ENST00000473214 COL8A2P25067 703 aa3.89□□□□□ -1.79
RTF1-203ENST00000473214 POLR2JP52435 117 aaKnown RBP3.89□□□□□ -1.79
RTF1-203ENST00000473214 KRTAP5-1Q6L8H4 278 aa3.89□□□□□ -1.79
RTF1-203ENST00000473214 SPANXA2-OT1Q8N9U9 137 aa3.89□□□□□ -1.79
RTF1-203ENST00000473214 RNF5Q99942 180 aa3.89□□□□□ -1.79
RTF1-203ENST00000473214 SPCS1Q9Y6A9 102 aa3.89□□□□□ -1.79
RTF1-203ENST00000473214 IGLV3-12A0A075B6K2 115 aa3.88□□□□□ -1.79
RTF1-203ENST00000473214 B4DSR2 109 aa3.88□□□□□ -1.79
RTF1-203ENST00000473214 ATOX1O00244 68 aa3.88□□□□□ -1.79
RTF1-203ENST00000473214 CRPP02741 224 aa3.88□□□□□ -1.79
RTF1-203ENST00000473214 SEC11AP67812 179 aa3.88□□□□□ -1.79
RTF1-203ENST00000473214 IGLV3-21P80748 117 aaPredicted RBP3.88□□□□□ -1.79
RTF1-203ENST00000473214 C1orf134Q5TEV5 83 aa3.88□□□□□ -1.79
RTF1-203ENST00000473214 SPANXN1Q5VSR9 72 aa3.88□□□□□ -1.79
RTF1-203ENST00000473214 Q6ZQT0 140 aa3.88□□□□□ -1.79
RTF1-203ENST00000473214 MGST2Q99735 147 aa3.88□□□□□ -1.79
RTF1-203ENST00000473214 VPS13CQ709C8 3753 aa3.87□□□□□ -1.79
RTF1-203ENST00000473214 CACNA1CQ13936 2221 aa3.87□□□□□ -1.79
RTF1-203ENST00000473214 NCOA6Q14686 2063 aaPredicted RBP3.87□□□□□ -1.79
RTF1-203ENST00000473214 A0A0J9YWU9 116 aa3.87□□□□□ -1.79
RTF1-203ENST00000473214 TRBV7-7A0A0K0K1E9 115 aa3.87□□□□□ -1.79
RTF1-203ENST00000473214 CFDP00746 253 aaPredicted RBP3.87□□□□□ -1.79
RTF1-203ENST00000473214 IGHV3-53P01767 116 aa3.87□□□□□ -1.79
RTF1-203ENST00000473214 MGST1P10620 155 aaKnown RBP3.87□□□□□ -1.79
RTF1-203ENST00000473214 ROMO1P60602 79 aa3.87□□□□□ -1.79
RTF1-203ENST00000473214 DEFB116Q30KQ4 102 aa3.87□□□□□ -1.79
RTF1-203ENST00000473214 SLC25A26Q70HW3 274 aa3.87□□□□□ -1.79
RTF1-203ENST00000473214 RPRMLQ8N4K4 120 aa3.87□□□□□ -1.79
RTF1-203ENST00000473214 CYB561D1Q8N8Q1 229 aa3.87□□□□□ -1.79
RTF1-203ENST00000473214 OR10AG1Q8NH19 301 aa3.87□□□□□ -1.79
RTF1-203ENST00000473214 ZNF431Q8TF32 576 aaPredicted RBP3.87□□□□□ -1.79
RTF1-203ENST00000473214 PPDPFLQ8WWR9 84 aa3.87□□□□□ -1.79
RTF1-203ENST00000473214 CUBNO60494 3623 aa3.87□□□□□ -1.79
RTF1-203ENST00000473214 AKAP6Q13023 2319 aa3.87□□□□□ -1.79
RTF1-203ENST00000473214 A0A096LNJ9 63 aa3.86□□□□□ -1.79
RTF1-203ENST00000473214 TRBV6-6A0A0A6YYG2 114 aa3.86□□□□□ -1.79
RTF1-203ENST00000473214 C11orf86A6NJI1 115 aa3.86□□□□□ -1.79
RTF1-203ENST00000473214 CLPSP04118 112 aa3.86□□□□□ -1.79
RTF1-203ENST00000473214 IGLV7-43P04211 117 aa3.86□□□□□ -1.79
RTF1-203ENST00000473214 KRTDAPP60985 99 aa3.86□□□□□ -1.79
RTF1-203ENST00000473214 HMGN3Q15651 99 aa3.86□□□□□ -1.79
RTF1-203ENST00000473214 COMMD6Q7Z4G1 85 aa3.86□□□□□ -1.79
RTF1-203ENST00000473214 HMGN2P46Q86SG4 172 aa3.86□□□□□ -1.79
RTF1-203ENST00000473214 FAM19A2Q8N3H0 131 aa3.86□□□□□ -1.79
RTF1-203ENST00000473214 DYNLRB2Q8TF09 96 aa3.86□□□□□ -1.79
RTF1-203ENST00000473214 CACFD1Q9UGQ2 172 aa3.86□□□□□ -1.79
RTF1-203ENST00000473214 ANKRD12Q6UB98 2062 aa3.86□□□□□ -1.79
RTF1-203ENST00000473214 ANK3Q12955 4377 aaKnown RBP3.85□□□□□ -1.79
RTF1-203ENST00000473214 ABCA4P78363 2273 aa3.85□□□□□ -1.79
RTF1-203ENST00000473214 IGKV2D-30A0A075B6S6 120 aa3.85□□□□□ -1.79
RTF1-203ENST00000473214 IGLC2P0DOY2 106 aa3.85□□□□□ -1.79
RTF1-203ENST00000473214 IGLC3P0DOY3 106 aa3.85□□□□□ -1.79
RTF1-203ENST00000473214 CCL8P80075 99 aa3.85□□□□□ -1.79
RTF1-203ENST00000473214 NNATQ16517 81 aa3.85□□□□□ -1.79
RTF1-203ENST00000473214 Q6ZR03 302 aa3.85□□□□□ -1.79
RTF1-203ENST00000473214 NDUFA12Q9UI09 145 aa3.85□□□□□ -1.79
RTF1-203ENST00000473214 FAM215AQ9Y5M1 114 aa3.85□□□□□ -1.79
RTF1-203ENST00000473214 HRNRQ86YZ3 2850 aaPredicted RBP3.85□□□□□ -1.79
RTF1-203ENST00000473214 PLXNB1O43157 2135 aa3.85□□□□□ -1.79
RTF1-203ENST00000473214 MXRA5Q9NR99 2828 aa3.84□□□□□ -1.79
RTF1-203ENST00000473214 IBA57-AS1B1ANH7 110 aa3.84□□□□□ -1.79
RTF1-203ENST00000473214 NUPR1O60356 82 aa3.84□□□□□ -1.79
RTF1-203ENST00000473214 IGLV1-47P01700 117 aa3.84□□□□□ -1.79
RTF1-203ENST00000473214 CCKP06307 115 aa3.84□□□□□ -1.79
RTF1-203ENST00000473214 GNG11P61952 73 aa3.84□□□□□ -1.79
RTF1-203ENST00000473214 ZNF345Q14585 488 aa3.84□□□□□ -1.79
RTF1-203ENST00000473214 C15orf32Q32M92 178 aa3.84□□□□□ -1.79
RTF1-203ENST00000473214 RPL7L1Q6DKI1 246 aaKnown RBP3.84□□□□□ -1.79
RTF1-203ENST00000473214 LINC00269Q8N2A0 174 aa3.84□□□□□ -1.79
RTF1-203ENST00000473214 TMEM141Q96I45 108 aa3.84□□□□□ -1.79
RTF1-203ENST00000473214 C14orf132Q9NPU4 83 aa3.84□□□□□ -1.79
RTF1-203ENST00000473214 CYTL1Q9NRR1 136 aa3.84□□□□□ -1.79
RTF1-203ENST00000473214 ZNF407Q9C0G0 2248 aa3.84□□□□□ -1.79
RTF1-203ENST00000473214 IGKV1D-42A0A075B6H8 117 aa3.83□□□□□ -1.8
RTF1-203ENST00000473214 A0A1W2PPM0 123 aa3.83□□□□□ -1.8
RTF1-203ENST00000473214 A6NIN4 97 aa3.83□□□□□ -1.8
RTF1-203ENST00000473214 RHOHQ15669 191 aa3.83□□□□□ -1.8
RTF1-203ENST00000473214 Q5W150 140 aa3.83□□□□□ -1.8
RTF1-203ENST00000473214 CCDC88CQ9P219 2028 aa3.83□□□□□ -1.8
RTF1-203ENST00000473214 MEGF8Q7Z7M0 2845 aa3.83□□□□□ -1.8
RTF1-203ENST00000473214 ANK2Q01484 3957 aa3.82□□□□□ -1.8
RTF1-203ENST00000473214 IGHV1-18A0A0C4DH31 117 aa3.82□□□□□ -1.8
RTF1-203ENST00000473214 PANO1I0J062 215 aa3.82□□□□□ -1.8
RTF1-203ENST00000473214 RNASE2P10153 161 aaKnown RBP3.82□□□□□ -1.8
RTF1-203ENST00000473214 ADCYAP1P18509 176 aa3.82□□□□□ -1.8
RTF1-203ENST00000473214 UBE2G1P62253 170 aa3.82□□□□□ -1.8
RTF1-203ENST00000473214 ETDBQ3ZM63 59 aa3.82□□□□□ -1.8
RTF1-203ENST00000473214 BVES-AS1Q5T3Y7 98 aa3.82□□□□□ -1.8
RTF1-203ENST00000473214 HEPN1Q6WQI6 88 aa3.82□□□□□ -1.8
RTF1-203ENST00000473214 CASC2Q6XLA1 102 aa3.82□□□□□ -1.8
RTF1-203ENST00000473214 TMEM136Q6ZRR5 245 aa3.82□□□□□ -1.8
RTF1-203ENST00000473214 DEFB106AQ8N104 65 aa3.82□□□□□ -1.8
RTF1-203ENST00000473214 MUCL1Q96DR8 90 aa3.82□□□□□ -1.8
RTF1-203ENST00000473214 AMELYQ99218 206 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms