RNA–Protein interactions for RNA: ENST00000472807.1

CHEK2-223, Transcript of checkpoint kinase 2, human

TSL 2

Gene CHEK2, Length 514 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHEK2-223	ENST00000472807	OR5A1	Q8NGJ0	315 aa		5.7	□□□□□ -1.5
CHEK2-223	ENST00000472807	SPACA4	Q8TDM5	124 aa		5.7	□□□□□ -1.5
CHEK2-223	ENST00000472807	MRAP2	Q96G30	205 aa		5.7	□□□□□ -1.5
CHEK2-223	ENST00000472807	FAM210A	Q96ND0	272 aa		5.7	□□□□□ -1.5
CHEK2-223	ENST00000472807	TMEM191A	Q9H0A3	160 aa		5.7	□□□□□ -1.5
CHEK2-223	ENST00000472807	GVQW2	A0A096LPI5	108 aa	Predicted RBP	5.69	□□□□□ -1.5
CHEK2-223	ENST00000472807	TSHB	P01222	138 aa		5.69	□□□□□ -1.5
CHEK2-223	ENST00000472807	SLPI	P03973	132 aa		5.69	□□□□□ -1.5
CHEK2-223	ENST00000472807	CHTF8	P0CG12	524 aa		5.69	□□□□□ -1.5
CHEK2-223	ENST00000472807	RPS10	P46783	165 aa	Known RBP	5.69	□□□□□ -1.5
CHEK2-223	ENST00000472807	XCL1	P47992	114 aa		5.69	□□□□□ -1.5
CHEK2-223	ENST00000472807	HIGD2B	Q4VC39	106 aa		5.69	□□□□□ -1.5
CHEK2-223	ENST00000472807	SERTAD4-AS1	Q5TG53	156 aa		5.69	□□□□□ -1.5
CHEK2-223	ENST00000472807	OSTC	Q9NRP0	149 aa		5.69	□□□□□ -1.5
CHEK2-223	ENST00000472807	TMEM242	Q9NWH2	141 aa		5.69	□□□□□ -1.5
CHEK2-223	ENST00000472807		A0A087WYN8	130 aa		5.68	□□□□□ -1.5
CHEK2-223	ENST00000472807	KRTAP4-8	A0A0G2JLE6	195 aa		5.68	□□□□□ -1.5
CHEK2-223	ENST00000472807	FOXI1	Q12951	378 aa		5.68	□□□□□ -1.5
CHEK2-223	ENST00000472807	RIG	Q13278	110 aa		5.68	□□□□□ -1.5
CHEK2-223	ENST00000472807	AMN1	Q8IY45	258 aa		5.68	□□□□□ -1.5
CHEK2-223	ENST00000472807	PKIG	Q9Y2B9	76 aa		5.68	□□□□□ -1.5
CHEK2-223	ENST00000472807	TNXB	P22105	4242 aa		5.67	□□□□□ -1.5
CHEK2-223	ENST00000472807	TRBV27	A0A0K0K1C4	114 aa		5.67	□□□□□ -1.5
CHEK2-223	ENST00000472807	LINC00959	A0A1B0GUT2	108 aa		5.67	□□□□□ -1.5
CHEK2-223	ENST00000472807	C7orf77	A4D0Y5	90 aa		5.67	□□□□□ -1.5
CHEK2-223	ENST00000472807	CCL25	O15444	150 aa		5.67	□□□□□ -1.5
CHEK2-223	ENST00000472807	GAS8-AS1	O95177	125 aa		5.67	□□□□□ -1.5
CHEK2-223	ENST00000472807	PPP1R17	O96001	155 aa		5.67	□□□□□ -1.5
CHEK2-223	ENST00000472807	SRP19	P09132	144 aa	Known RBP	5.67	□□□□□ -1.5
CHEK2-223	ENST00000472807	ESD	P10768	282 aa		5.67	□□□□□ -1.5
CHEK2-223	ENST00000472807	RAB4A	P20338	218 aa		5.67	□□□□□ -1.5
CHEK2-223	ENST00000472807	FCER1G	P30273	86 aa		5.67	□□□□□ -1.5
CHEK2-223	ENST00000472807	HNRNPA3	P51991	378 aa	Known RBP	5.67	□□□□□ -1.5
CHEK2-223	ENST00000472807	IFITM2	Q01629	132 aa		5.67	□□□□□ -1.5
CHEK2-223	ENST00000472807	COX6A2	Q02221	97 aa		5.67	□□□□□ -1.5
CHEK2-223	ENST00000472807	SMAGP	Q0VAQ4	97 aa		5.67	□□□□□ -1.5
CHEK2-223	ENST00000472807	SS18	Q15532	418 aa		5.67	□□□□□ -1.5
CHEK2-223	ENST00000472807	FAM74A3	Q4VXF1	159 aa		5.67	□□□□□ -1.5
CHEK2-223	ENST00000472807	MRPL52	Q86TS9	123 aa	Known RBP	5.67	□□□□□ -1.5
CHEK2-223	ENST00000472807	C7orf33	Q8WU49	177 aa		5.67	□□□□□ -1.5
CHEK2-223	ENST00000472807	NAT8B	Q9UHF3	227 aa		5.67	□□□□□ -1.5
CHEK2-223	ENST00000472807		V9GYV3	84 aa		5.67	□□□□□ -1.5
CHEK2-223	ENST00000472807	IGHV1-58	A0A0C4DH39	117 aa		5.66	□□□□□ -1.5
CHEK2-223	ENST00000472807	IGKV2-24	A0A0C4DH68	120 aa		5.66	□□□□□ -1.5
CHEK2-223	ENST00000472807	VCY	O14598	125 aa		5.66	□□□□□ -1.5
CHEK2-223	ENST00000472807	POLR2K	P53803	58 aa	Known RBP	5.66	□□□□□ -1.5
CHEK2-223	ENST00000472807	ADIRF	Q15847	76 aa		5.66	□□□□□ -1.5
CHEK2-223	ENST00000472807	TMEM241	Q24JQ0	296 aa		5.66	□□□□□ -1.5
CHEK2-223	ENST00000472807	MAJIN	Q3KP22	176 aa		5.66	□□□□□ -1.5
CHEK2-223	ENST00000472807	NUP35	Q8NFH5	326 aa		5.66	□□□□□ -1.5
CHEK2-223	ENST00000472807	ISOC2	Q96AB3	205 aa		5.66	□□□□□ -1.5
CHEK2-223	ENST00000472807	KIR2DL4	Q99706	377 aa		5.66	□□□□□ -1.5
CHEK2-223	ENST00000472807	CDC42SE2	Q9NRR3	84 aa		5.66	□□□□□ -1.5
CHEK2-223	ENST00000472807	PLAC8	Q9NZF1	115 aa		5.66	□□□□□ -1.5
CHEK2-223	ENST00000472807	SMKR1	H3BMG3	65 aa		5.65	□□□□□ -1.5
CHEK2-223	ENST00000472807	PPP1R2P9	O14990	202 aa		5.65	□□□□□ -1.5
CHEK2-223	ENST00000472807	SUMO2	P61956	95 aa	Known RBP	5.65	□□□□□ -1.5
CHEK2-223	ENST00000472807	CD164L2	Q6UWJ8	174 aa		5.65	□□□□□ -1.5
CHEK2-223	ENST00000472807		Q6ZRU5	148 aa		5.65	□□□□□ -1.5
CHEK2-223	ENST00000472807	ZNF664	Q8N3J9	261 aa		5.65	□□□□□ -1.5
CHEK2-223	ENST00000472807	PRSS3P2	Q8NHM4	247 aa		5.65	□□□□□ -1.5
CHEK2-223	ENST00000472807	CARD19	Q96LW7	228 aa		5.65	□□□□□ -1.5
CHEK2-223	ENST00000472807	LINC00474	Q9P2X8	69 aa		5.65	□□□□□ -1.5
CHEK2-223	ENST00000472807		A0A1B0GW15	77 aa		5.64	□□□□□ -1.51
CHEK2-223	ENST00000472807	ZNF561-AS1	K7EIQ3	104 aa		5.64	□□□□□ -1.51
CHEK2-223	ENST00000472807	PHOX2A	O14813	284 aa		5.64	□□□□□ -1.51
CHEK2-223	ENST00000472807	ATP6V1G1	O75348	118 aa		5.64	□□□□□ -1.51
CHEK2-223	ENST00000472807	RPL23	P62829	140 aa	Known RBP	5.64	□□□□□ -1.51
CHEK2-223	ENST00000472807	NRAC	Q8N912	160 aa		5.64	□□□□□ -1.51
CHEK2-223	ENST00000472807	NAT8	Q9UHE5	227 aa		5.64	□□□□□ -1.51
CHEK2-223	ENST00000472807		A0A096LNI7	61 aa		5.63	□□□□□ -1.51
CHEK2-223	ENST00000472807	SMIM27	A0A1W2PRY6	76 aa		5.63	□□□□□ -1.51
CHEK2-223	ENST00000472807	C1orf196	B1AJZ1	125 aa		5.63	□□□□□ -1.51
CHEK2-223	ENST00000472807	MAL	P21145	153 aa		5.63	□□□□□ -1.51
CHEK2-223	ENST00000472807	CAMP	P49913	170 aa		5.63	□□□□□ -1.51
CHEK2-223	ENST00000472807	PEA15	Q15121	130 aa		5.63	□□□□□ -1.51
CHEK2-223	ENST00000472807	FAM104B	Q5XKR9	115 aa		5.63	□□□□□ -1.51
CHEK2-223	ENST00000472807	STPG4	Q8N801	248 aa		5.63	□□□□□ -1.51
CHEK2-223	ENST00000472807	TMEM18	Q96B42	140 aa		5.63	□□□□□ -1.51
CHEK2-223	ENST00000472807	PLA2G2D	Q9UNK4	145 aa		5.63	□□□□□ -1.51
CHEK2-223	ENST00000472807	CSDC2	Q9Y534	153 aa	Known RBP	5.63	□□□□□ -1.51
CHEK2-223	ENST00000472807	COX7A2L	O14548	114 aa		5.62	□□□□□ -1.51
CHEK2-223	ENST00000472807	TCAP	O15273	167 aa		5.62	□□□□□ -1.51
CHEK2-223	ENST00000472807	S100A8	P05109	93 aa		5.62	□□□□□ -1.51
CHEK2-223	ENST00000472807	S100A1	P23297	94 aa		5.62	□□□□□ -1.51
CHEK2-223	ENST00000472807	CKS2	P33552	79 aa		5.62	□□□□□ -1.51
CHEK2-223	ENST00000472807	PRR3	P79522	188 aa	Known RBP	5.62	□□□□□ -1.51
CHEK2-223	ENST00000472807	SYCN	Q0VAF6	134 aa		5.62	□□□□□ -1.51
CHEK2-223	ENST00000472807	MRPL51	Q4U2R6	128 aa	Known RBP	5.62	□□□□□ -1.51
CHEK2-223	ENST00000472807	LINC00526	Q96FQ7	95 aa		5.62	□□□□□ -1.51
CHEK2-223	ENST00000472807	C20orf78	Q9BR46	151 aa		5.62	□□□□□ -1.51
CHEK2-223	ENST00000472807	SMDT1	Q9H4I9	107 aa		5.62	□□□□□ -1.51
CHEK2-223	ENST00000472807	UBE2D4	Q9Y2X8	147 aa		5.62	□□□□□ -1.51
CHEK2-223	ENST00000472807	TRAV13-1	A0A0B4J241	112 aa		5.61	□□□□□ -1.51
CHEK2-223	ENST00000472807	LINC00862	A6NCI5	91 aa		5.61	□□□□□ -1.51
CHEK2-223	ENST00000472807		C9JQL5	133 aa		5.61	□□□□□ -1.51
CHEK2-223	ENST00000472807		F8W036	122 aa		5.61	□□□□□ -1.51
CHEK2-223	ENST00000472807	HBB	P68871	147 aa		5.61	□□□□□ -1.51
CHEK2-223	ENST00000472807	RNASE13	Q5GAN3	156 aa	Known RBP	5.61	□□□□□ -1.51
CHEK2-223	ENST00000472807		Q6ZUT4	128 aa		5.61	□□□□□ -1.51

Retrieved 100 of 20,778 RNA–protein pairs in 120.1 ms