RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 DNAH10OSP0CZ25 163 aa9.18□□□□□ -0.94
HMGN1-211ENST00000471260 PTTG1IPP53801 180 aa9.18□□□□□ -0.94
HMGN1-211ENST00000471260 PIK3CD-AS1Q5SR53 167 aa9.18□□□□□ -0.94
HMGN1-211ENST00000471260 C10orf126Q8N4M7 172 aa9.18□□□□□ -0.94
HMGN1-211ENST00000471260 PRADC1Q9BSG0 188 aa9.18□□□□□ -0.94
HMGN1-211ENST00000471260 HIGD1BQ9P298 99 aa9.18□□□□□ -0.94
HMGN1-211ENST00000471260 C11orf21Q9P2W6 132 aa9.18□□□□□ -0.94
HMGN1-211ENST00000471260 LRP1BQ9NZR2 4599 aa9.17□□□□□ -0.94
HMGN1-211ENST00000471260 TAX1BP3O14907 124 aa9.17□□□□□ -0.94
HMGN1-211ENST00000471260 RNASE3P12724 160 aaKnown RBP9.17□□□□□ -0.94
HMGN1-211ENST00000471260 RHOHQ15669 191 aa9.17□□□□□ -0.94
HMGN1-211ENST00000471260 TMEM97Q5BJF2 176 aa9.17□□□□□ -0.94
HMGN1-211ENST00000471260 CFAP126Q5VTH2 177 aa9.17□□□□□ -0.94
HMGN1-211ENST00000471260 NRACQ8N912 160 aa9.17□□□□□ -0.94
HMGN1-211ENST00000471260 C20orf78Q9BR46 151 aa9.17□□□□□ -0.94
HMGN1-211ENST00000471260 PGPEP1Q9NXJ5 209 aa9.17□□□□□ -0.94
HMGN1-211ENST00000471260 RYR1P21817 5038 aa9.17□□□□□ -0.94
HMGN1-211ENST00000471260 SMKR1H3BMG3 65 aa9.16□□□□□ -0.94
HMGN1-211ENST00000471260 ASIPP42127 132 aa9.16□□□□□ -0.94
HMGN1-211ENST00000471260 RPL32P62910 135 aaKnown RBP9.16□□□□□ -0.94
HMGN1-211ENST00000471260 LAGE3Q14657 143 aa9.16□□□□□ -0.94
HMGN1-211ENST00000471260 ODF1Q14990 250 aa9.16□□□□□ -0.94
HMGN1-211ENST00000471260 ORMDL2Q53FV1 153 aa9.16□□□□□ -0.94
HMGN1-211ENST00000471260 ANKRD39Q53RE8 183 aa9.16□□□□□ -0.94
HMGN1-211ENST00000471260 SPANXN1Q5VSR9 72 aa9.16□□□□□ -0.94
HMGN1-211ENST00000471260 WFDC10BQ8IUB3 73 aa9.16□□□□□ -0.94
HMGN1-211ENST00000471260 SLC25A29Q8N8R3 303 aa9.16□□□□□ -0.94
HMGN1-211ENST00000471260 DPH3P1Q9H4G8 78 aa9.16□□□□□ -0.94
HMGN1-211ENST00000471260 MSRB1Q9NZV6 116 aa9.16□□□□□ -0.94
HMGN1-211ENST00000471260 TRAV12-1A0A0B4J245 112 aa9.15□□□□□ -0.94
HMGN1-211ENST00000471260 MUC21A0A0G2JKD1 596 aa9.15□□□□□ -0.94
HMGN1-211ENST00000471260 LOC100131303A0A0U1RQF7 123 aa9.15□□□□□ -0.94
HMGN1-211ENST00000471260 MUC21A0A140T8X8 626 aa9.15□□□□□ -0.94
HMGN1-211ENST00000471260 S100A4P26447 101 aaKnown RBP9.15□□□□□ -0.94
HMGN1-211ENST00000471260 KRTAP10-2P60368 255 aa9.15□□□□□ -0.94
HMGN1-211ENST00000471260 AP1S3Q96PC3 154 aa9.15□□□□□ -0.94
HMGN1-211ENST00000471260 SMIM2Q9BVW6 85 aa9.15□□□□□ -0.94
HMGN1-211ENST00000471260 IGHV3-38A0A0C4DH36 116 aa9.14□□□□□ -0.95
HMGN1-211ENST00000471260 A8MWV9 139 aa9.14□□□□□ -0.95
HMGN1-211ENST00000471260 DPM2O94777 84 aa9.14□□□□□ -0.95
HMGN1-211ENST00000471260 IGKCP01834 107 aa9.14□□□□□ -0.95
HMGN1-211ENST00000471260 CRYGDP07320 174 aa9.14□□□□□ -0.95
HMGN1-211ENST00000471260 PLNP26678 52 aa9.14□□□□□ -0.95
HMGN1-211ENST00000471260 ZFP2Q6ZN57 461 aa9.14□□□□□ -0.95
HMGN1-211ENST00000471260 HSPG2P98160 4391 aa9.13□□□□□ -0.95
HMGN1-211ENST00000471260 TRAV8-6A0A0B4J262 113 aa9.13□□□□□ -0.95
HMGN1-211ENST00000471260 H3BRM9 83 aa9.13□□□□□ -0.95
HMGN1-211ENST00000471260 H3BVH4 76 aa9.13□□□□□ -0.95
HMGN1-211ENST00000471260 CCL25O15444 150 aa9.13□□□□□ -0.95
HMGN1-211ENST00000471260 VAMP3Q15836 100 aa9.13□□□□□ -0.95
HMGN1-211ENST00000471260 LINC01556Q5JQF7 62 aa9.13□□□□□ -0.95
HMGN1-211ENST00000471260 CBY1Q9Y3M2 126 aa9.13□□□□□ -0.95
HMGN1-211ENST00000471260 TNFRSF18Q9Y5U5 241 aa9.13□□□□□ -0.95
HMGN1-211ENST00000471260 PCLOQ9Y6V0 5065 aa9.12□□□□□ -0.95
HMGN1-211ENST00000471260 TAL2Q16559 108 aa9.12□□□□□ -0.95
HMGN1-211ENST00000471260 LELP1Q5T871 98 aa9.12□□□□□ -0.95
HMGN1-211ENST00000471260 MAPKAPK5-AS1Q8N8E1 139 aa9.12□□□□□ -0.95
HMGN1-211ENST00000471260 GTSF1LQ9H1H1 148 aa9.12□□□□□ -0.95
HMGN1-211ENST00000471260 DNAH5Q8TE73 4624 aa9.11□□□□□ -0.95
HMGN1-211ENST00000471260 A0A087WTM6 91 aa9.11□□□□□ -0.95
HMGN1-211ENST00000471260 IGHV3-73A0A0B4J1V6 119 aa9.11□□□□□ -0.95
HMGN1-211ENST00000471260 SMIM17P0DL12 118 aa9.11□□□□□ -0.95
HMGN1-211ENST00000471260 ATP6V0E2Q8NHE4 81 aa9.11□□□□□ -0.95
HMGN1-211ENST00000471260 PHLDA3Q9Y5J5 127 aa9.11□□□□□ -0.95
HMGN1-211ENST00000471260 A0A087WX48 190 aa9.1□□□□□ -0.95
HMGN1-211ENST00000471260 PRSS1P07477 247 aa9.1□□□□□ -0.95
HMGN1-211ENST00000471260 SUMO2P61956 95 aaKnown RBP9.1□□□□□ -0.95
HMGN1-211ENST00000471260 GTF2H5Q6ZYL4 71 aa9.1□□□□□ -0.95
HMGN1-211ENST00000471260 Q8N1X5 172 aa9.1□□□□□ -0.95
HMGN1-211ENST00000471260 SYT8Q8NBV8 401 aa9.1□□□□□ -0.95
HMGN1-211ENST00000471260 C9orf118A6NHY6 69 aa9.09□□□□□ -0.95
HMGN1-211ENST00000471260 IBA57-AS1B1ANH7 110 aa9.09□□□□□ -0.95
HMGN1-211ENST00000471260 F8VRH5 84 aa9.09□□□□□ -0.95
HMGN1-211ENST00000471260 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.09□□□□□ -0.95
HMGN1-211ENST00000471260 RHODO00212 210 aa9.09□□□□□ -0.95
HMGN1-211ENST00000471260 UFSP1Q6NVU6 142 aa9.09□□□□□ -0.95
HMGN1-211ENST00000471260 TOMM6Q96B49 74 aa9.09□□□□□ -0.95
HMGN1-211ENST00000471260 KRTAP4-5Q9BYR2 181 aa9.09□□□□□ -0.95
HMGN1-211ENST00000471260 TP73-AS1Q9UF72 201 aa9.09□□□□□ -0.95
HMGN1-211ENST00000471260 H7C1H1 209 aa9.08□□□□□ -0.96
HMGN1-211ENST00000471260 NMUP48645 174 aa9.08□□□□□ -0.96
HMGN1-211ENST00000471260 PSCAO43653 123 aa9.07□□□□□ -0.96
HMGN1-211ENST00000471260 LINC00694P0DN24 101 aa9.07□□□□□ -0.96
HMGN1-211ENST00000471260 PAPPA-AS1Q5QFB9 102 aa9.07□□□□□ -0.96
HMGN1-211ENST00000471260 Q6ZSN1 163 aa9.07□□□□□ -0.96
HMGN1-211ENST00000471260 OR5A1Q8NGJ0 315 aa9.07□□□□□ -0.96
HMGN1-211ENST00000471260 GAS8-AS1O95177 125 aa9.06□□□□□ -0.96
HMGN1-211ENST00000471260 ZC2HC1BQ5TFG8 222 aa9.06□□□□□ -0.96
HMGN1-211ENST00000471260 CHAC1Q9BUX1 264 aa9.06□□□□□ -0.96
HMGN1-211ENST00000471260 APOBP04114 4563 aaKnown RBP9.06□□□□□ -0.96
HMGN1-211ENST00000471260 TRBV6-5A0A0K0K1A5 114 aa9.05□□□□□ -0.96
HMGN1-211ENST00000471260 NTN5Q8WTR8 489 aaPredicted RBP9.05□□□□□ -0.96
HMGN1-211ENST00000471260 JPT2Q9H910 190 aa9.05□□□□□ -0.96
HMGN1-211ENST00000471260 MRPL35Q9NZE8 188 aaKnown RBP9.05□□□□□ -0.96
HMGN1-211ENST00000471260 LRCOL1A6NCL2 159 aa9.04□□□□□ -0.96
HMGN1-211ENST00000471260 GAGE12JA6NER3 117 aa9.04□□□□□ -0.96
HMGN1-211ENST00000471260 K7EP34 96 aa9.04□□□□□ -0.96
HMGN1-211ENST00000471260 GAGE4Q13068 117 aa9.04□□□□□ -0.96
HMGN1-211ENST00000471260 GAGE5Q13069 117 aa9.04□□□□□ -0.96
HMGN1-211ENST00000471260 GAGE13Q4V321 117 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms