RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 LOC101927531A0A1B0GV80 90 aa2.37□□□□□ -2.03
PRPF40A-206ENST00000471167 JMJD7-PLA2G4BH0Y9G9 81 aa2.37□□□□□ -2.03
PRPF40A-206ENST00000471167 IGLV3-1P01715 115 aa2.37□□□□□ -2.03
PRPF40A-206ENST00000471167 SFTA3P0C7M3 94 aa2.37□□□□□ -2.03
PRPF40A-206ENST00000471167 PDE6GP18545 87 aa2.37□□□□□ -2.03
PRPF40A-206ENST00000471167 SPAG11BQ08648 103 aa2.37□□□□□ -2.03
PRPF40A-206ENST00000471167 SPAG11AQ6PDA7 123 aa2.37□□□□□ -2.03
PRPF40A-206ENST00000471167 ARFGEF2Q9Y6D5 1785 aa2.36□□□□□ -2.03
PRPF40A-206ENST00000471167 SEC16AO15027 2179 aa2.36□□□□□ -2.03
PRPF40A-206ENST00000471167 A0A1B0GWA3 101 aa2.36□□□□□ -2.03
PRPF40A-206ENST00000471167 FAM223BA6NKX1 122 aa2.36□□□□□ -2.03
PRPF40A-206ENST00000471167 C10orf142B7Z368 130 aa2.36□□□□□ -2.03
PRPF40A-206ENST00000471167 IGLV6-57P01721 117 aa2.36□□□□□ -2.03
PRPF40A-206ENST00000471167 SAA2P0DJI9 122 aaPredicted RBP2.36□□□□□ -2.03
PRPF40A-206ENST00000471167 DEFB121Q5J5C9 76 aa2.36□□□□□ -2.03
PRPF40A-206ENST00000471167 WFDC10AQ9H1F0 79 aa2.36□□□□□ -2.03
PRPF40A-206ENST00000471167 PSENENQ9NZ42 101 aa2.36□□□□□ -2.03
PRPF40A-206ENST00000471167 ARL2-SNX15V9GYD0 113 aa2.36□□□□□ -2.03
PRPF40A-206ENST00000471167 CEP192Q8TEP8 1941 aa2.36□□□□□ -2.03
PRPF40A-206ENST00000471167 NRXN2Q9P2S2 1712 aa2.36□□□□□ -2.03
PRPF40A-206ENST00000471167 TIAM1Q13009 1591 aa2.36□□□□□ -2.03
PRPF40A-206ENST00000471167 AFDNP55196 1824 aaKnown RBP2.35□□□□□ -2.03
PRPF40A-206ENST00000471167 CEBPZOSA8MTT3 80 aa2.35□□□□□ -2.03
PRPF40A-206ENST00000471167 DNAL4O96015 105 aa2.35□□□□□ -2.03
PRPF40A-206ENST00000471167 IGLV3-19P01714 112 aa2.35□□□□□ -2.03
PRPF40A-206ENST00000471167 CCL3L1P16619 93 aa2.35□□□□□ -2.03
PRPF40A-206ENST00000471167 PLGLAQ15195 96 aa2.35□□□□□ -2.03
PRPF40A-206ENST00000471167 C10orf55Q5SWW7 151 aa2.35□□□□□ -2.03
PRPF40A-206ENST00000471167 C6orf201Q7Z4U5 140 aa2.35□□□□□ -2.03
PRPF40A-206ENST00000471167 KLK9Q9UKQ9 250 aa2.35□□□□□ -2.03
PRPF40A-206ENST00000471167 KIAA0100Q14667 2235 aaKnown RBP2.35□□□□□ -2.03
PRPF40A-206ENST00000471167 EHBP1L1Q8N3D4 1523 aa2.35□□□□□ -2.03
PRPF40A-206ENST00000471167 ESPL1Q14674 2120 aa2.35□□□□□ -2.03
PRPF40A-206ENST00000471167 PDCD11Q14690 1871 aaKnown RBP2.35□□□□□ -2.03
PRPF40A-206ENST00000471167 RGPD1P0DJD0 1748 aa2.34□□□□□ -2.03
PRPF40A-206ENST00000471167 COL5A3P25940 1745 aaPredicted RBP2.34□□□□□ -2.03
PRPF40A-206ENST00000471167 BTAF1O14981 1849 aa2.34□□□□□ -2.03
PRPF40A-206ENST00000471167 Q86TA4 180 aa2.34□□□□□ -2.03
PRPF40A-206ENST00000471167 COX7B2Q8TF08 81 aa2.34□□□□□ -2.03
PRPF40A-206ENST00000471167 LRRC37A3O60309 1634 aa2.34□□□□□ -2.04
PRPF40A-206ENST00000471167 ABCA9Q8IUA7 1624 aa2.34□□□□□ -2.04
PRPF40A-206ENST00000471167 MYOM1P52179 1685 aa2.34□□□□□ -2.04
PRPF40A-206ENST00000471167 CTTNBP2Q8WZ74 1663 aa2.34□□□□□ -2.04
PRPF40A-206ENST00000471167 ITSN1Q15811 1721 aa2.34□□□□□ -2.04
PRPF40A-206ENST00000471167 SIP14410 1827 aa2.33□□□□□ -2.04
PRPF40A-206ENST00000471167 LAMA4Q16363 1823 aa2.33□□□□□ -2.04
PRPF40A-206ENST00000471167 FBN1P35555 2871 aaKnown RBP2.33□□□□□ -2.04
PRPF40A-206ENST00000471167 IGLV3-32A0A0A0MS00 114 aa2.33□□□□□ -2.04
PRPF40A-206ENST00000471167 A0A1W2PNN7 141 aa2.33□□□□□ -2.04
PRPF40A-206ENST00000471167 H3BRN7 92 aa2.33□□□□□ -2.04
PRPF40A-206ENST00000471167 LEPROTL1O95214 131 aa2.33□□□□□ -2.04
PRPF40A-206ENST00000471167 COX8AP10176 69 aa2.33□□□□□ -2.04
PRPF40A-206ENST00000471167 SPINT3P49223 89 aa2.33□□□□□ -2.04
PRPF40A-206ENST00000471167 FAM74A4Q5TZK3 123 aa2.33□□□□□ -2.04
PRPF40A-206ENST00000471167 CR1P17927 2039 aa2.33□□□□□ -2.04
PRPF40A-206ENST00000471167 MRC1P22897 1456 aa2.33□□□□□ -2.04
PRPF40A-206ENST00000471167 URB2Q14146 1524 aaKnown RBP2.32□□□□□ -2.04
PRPF40A-206ENST00000471167 ASXL1Q8IXJ9 1541 aa2.32□□□□□ -2.04
PRPF40A-206ENST00000471167 ARHGEF5Q12774 1597 aa2.32□□□□□ -2.04
PRPF40A-206ENST00000471167 IGKV3D-7A0A0C4DH55 119 aa2.32□□□□□ -2.04
PRPF40A-206ENST00000471167 IGKV3OR2-268A0A0C4DH90 116 aa2.32□□□□□ -2.04
PRPF40A-206ENST00000471167 FXYD1O00168 92 aa2.32□□□□□ -2.04
PRPF40A-206ENST00000471167 ARMS2P0C7Q2 107 aa2.32□□□□□ -2.04
PRPF40A-206ENST00000471167 RNASE3P12724 160 aaKnown RBP2.32□□□□□ -2.04
PRPF40A-206ENST00000471167 GCHFRP30047 84 aa2.32□□□□□ -2.04
PRPF40A-206ENST00000471167 PRR15LQ9BU68 103 aa2.32□□□□□ -2.04
PRPF40A-206ENST00000471167 PROK2Q9HC23 129 aa2.32□□□□□ -2.04
PRPF40A-206ENST00000471167 R4GMQ9 66 aa2.32□□□□□ -2.04
PRPF40A-206ENST00000471167 GBF1Q92538 1859 aa2.32□□□□□ -2.04
PRPF40A-206ENST00000471167 DOCK11Q5JSL3 2073 aa2.32□□□□□ -2.04
PRPF40A-206ENST00000471167 RAPGEF6Q8TEU7 1601 aa2.31□□□□□ -2.04
PRPF40A-206ENST00000471167 DLEC1Q9Y238 1755 aa2.31□□□□□ -2.04
PRPF40A-206ENST00000471167 D6R8Y8 96 aa2.31□□□□□ -2.04
PRPF40A-206ENST00000471167 RPL37AP61513 92 aaKnown RBP2.31□□□□□ -2.04
PRPF40A-206ENST00000471167 Q6JHZ5 121 aa2.31□□□□□ -2.04
PRPF40A-206ENST00000471167 SMIM5Q71RC9 77 aa2.31□□□□□ -2.04
PRPF40A-206ENST00000471167 MUSTN1Q8IVN3 82 aa2.31□□□□□ -2.04
PRPF40A-206ENST00000471167 AMELXQ99217 191 aa2.31□□□□□ -2.04
PRPF40A-206ENST00000471167 TMEM14CQ9P0S9 112 aa2.31□□□□□ -2.04
PRPF40A-206ENST00000471167 HILPDAQ9Y5L2 63 aa2.31□□□□□ -2.04
PRPF40A-206ENST00000471167 UNC13CQ8NB66 2214 aa2.31□□□□□ -2.04
PRPF40A-206ENST00000471167 PLXNC1O60486 1568 aa2.31□□□□□ -2.04
PRPF40A-206ENST00000471167 MAP2P11137 1827 aaKnown RBP2.31□□□□□ -2.04
PRPF40A-206ENST00000471167 ARFGEF1Q9Y6D6 1849 aa2.31□□□□□ -2.04
PRPF40A-206ENST00000471167 SPTBP11277 2137 aa2.3□□□□□ -2.04
PRPF40A-206ENST00000471167 PI4KAP42356 2102 aa2.3□□□□□ -2.04
PRPF40A-206ENST00000471167 MED12Q93074 2177 aa2.3□□□□□ -2.04
PRPF40A-206ENST00000471167 F8VRH5 84 aa2.3□□□□□ -2.04
PRPF40A-206ENST00000471167 PRR9Q5T870 116 aa2.3□□□□□ -2.04
PRPF40A-206ENST00000471167 PPP1R1CQ8WVI7 109 aa2.3□□□□□ -2.04
PRPF40A-206ENST00000471167 V9GYV3 84 aa2.3□□□□□ -2.04
PRPF40A-206ENST00000471167 C1orf167Q5SNV9 1468 aa2.3□□□□□ -2.04
PRPF40A-206ENST00000471167 COL4A2P08572 1712 aa2.3□□□□□ -2.04
PRPF40A-206ENST00000471167 SCN7AQ01118 1682 aa2.29□□□□□ -2.04
PRPF40A-206ENST00000471167 RREB1Q92766 1687 aa2.29□□□□□ -2.04
PRPF40A-206ENST00000471167 TRGV4A0A0C4DH28 118 aa2.29□□□□□ -2.04
PRPF40A-206ENST00000471167 IGKV2-24A0A0C4DH68 120 aa2.29□□□□□ -2.04
PRPF40A-206ENST00000471167 NBDYA0A0U1RRE5 68 aa2.29□□□□□ -2.04
PRPF40A-206ENST00000471167 IL9P15248 144 aa2.29□□□□□ -2.04
PRPF40A-206ENST00000471167 CCL18P55774 89 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms