RNA–Protein interactions for RNA: ENST00000467378.1

USP11-205, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 696 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-205ENST00000467378 Q8N8P6 123 aa12.72□□□□□ -0.37
USP11-205ENST00000467378 TRAPPC1Q9Y5R8 145 aa12.72□□□□□ -0.37
USP11-205ENST00000467378 AMMECR1LQ6DCA0 310 aa12.71□□□□□ -0.37
USP11-205ENST00000467378 RNASEKQ6P5S7 137 aaKnown RBP12.71□□□□□ -0.37
USP11-205ENST00000467378 CRPP02741 224 aa12.7□□□□□ -0.38
USP11-205ENST00000467378 ZNF25P17030 456 aaPredicted RBP12.7□□□□□ -0.38
USP11-205ENST00000467378 MRPL52Q86TS9 123 aaKnown RBP12.7□□□□□ -0.38
USP11-205ENST00000467378 TM2D2Q9BX73 214 aa12.7□□□□□ -0.38
USP11-205ENST00000467378 SRRM2Q9UQ35 2752 aaKnown RBP12.69□□□□□ -0.38
USP11-205ENST00000467378 RAB5AP20339 215 aa12.69□□□□□ -0.38
USP11-205ENST00000467378 REG3AQ06141 175 aa12.69□□□□□ -0.38
USP11-205ENST00000467378 MIAQ16674 131 aa12.69□□□□□ -0.38
USP11-205ENST00000467378 MYCBP2O75592 4640 aa12.69□□□□□ -0.38
USP11-205ENST00000467378 J3QL48 77 aa12.68□□□□□ -0.38
USP11-205ENST00000467378 IFI27P40305 119 aaPredicted RBP12.68□□□□□ -0.38
USP11-205ENST00000467378 CLPSL2Q6UWE3 100 aa12.68□□□□□ -0.38
USP11-205ENST00000467378 TMEM18Q96B42 140 aa12.68□□□□□ -0.38
USP11-205ENST00000467378 RMI2Q96E14 147 aa12.68□□□□□ -0.38
USP11-205ENST00000467378 NXT2Q9NPJ8 142 aaKnown RBP12.68□□□□□ -0.38
USP11-205ENST00000467378 UBE2D4Q9Y2X8 147 aa12.68□□□□□ -0.38
USP11-205ENST00000467378 IGKV2D-24A0A075B6R9 120 aa12.67□□□□□ -0.38
USP11-205ENST00000467378 PSCAO43653 123 aa12.67□□□□□ -0.38
USP11-205ENST00000467378 TMEM101Q96IK0 257 aa12.67□□□□□ -0.38
USP11-205ENST00000467378 COX11Q9Y6N1 276 aa12.67□□□□□ -0.38
USP11-205ENST00000467378 LRCOL1A6NCL2 159 aa12.66□□□□□ -0.38
USP11-205ENST00000467378 XGP55808 180 aa12.66□□□□□ -0.38
USP11-205ENST00000467378 RPL39P62891 51 aaKnown RBP12.66□□□□□ -0.38
USP11-205ENST00000467378 TIMM21Q9BVV7 248 aa12.66□□□□□ -0.38
USP11-205ENST00000467378 CDC42SE2Q9NRR3 84 aa12.66□□□□□ -0.38
USP11-205ENST00000467378 CSDC2Q9Y534 153 aaKnown RBP12.66□□□□□ -0.38
USP11-205ENST00000467378 K7EMI3 77 aa12.65□□□□□ -0.38
USP11-205ENST00000467378 OR5A1Q8NGJ0 315 aa12.65□□□□□ -0.38
USP11-205ENST00000467378 C1orf43Q9BWL3 253 aa12.65□□□□□ -0.38
USP11-205ENST00000467378 A0A087WTM6 91 aa12.64□□□□□ -0.39
USP11-205ENST00000467378 COLCA2A8K830 154 aa12.64□□□□□ -0.39
USP11-205ENST00000467378 SMAGPQ0VAQ4 97 aa12.64□□□□□ -0.39
USP11-205ENST00000467378 KRTAP26-1Q6PEX3 210 aa12.64□□□□□ -0.39
USP11-205ENST00000467378 VPS13BQ7Z7G8 4022 aa12.64□□□□□ -0.39
USP11-205ENST00000467378 FAT1Q14517 4588 aa12.64□□□□□ -0.39
USP11-205ENST00000467378 TRAV8-4A0A0B4J246 113 aa12.63□□□□□ -0.39
USP11-205ENST00000467378 SCO1O75880 301 aa12.63□□□□□ -0.39
USP11-205ENST00000467378 ORMDL2Q53FV1 153 aa12.63□□□□□ -0.39
USP11-205ENST00000467378 DGAT2L7PQ6IED9 249 aa12.63□□□□□ -0.39
USP11-205ENST00000467378 ZNF664Q8N3J9 261 aa12.63□□□□□ -0.39
USP11-205ENST00000467378 PRSS3P2Q8NHM4 247 aa12.63□□□□□ -0.39
USP11-205ENST00000467378 UBR4Q5T4S7 5183 aa12.62□□□□□ -0.39
USP11-205ENST00000467378 LINC01546A6NGU7 62 aa12.62□□□□□ -0.39
USP11-205ENST00000467378 FUSP35637 526 aaKnown RBP eCLIP12.62□□□□□ -0.39
USP11-205ENST00000467378 FAM104AQ969W3 186 aa12.62□□□□□ -0.39
USP11-205ENST00000467378 IGLV10-54A0A075B6I4 117 aa12.61□□□□□ -0.39
USP11-205ENST00000467378 IGKV3OR2-268A0A0C4DH90 116 aa12.61□□□□□ -0.39
USP11-205ENST00000467378 SMR3BP02814 79 aaPredicted RBP12.61□□□□□ -0.39
USP11-205ENST00000467378 C18orf32Q8TCD1 76 aa12.61□□□□□ -0.39
USP11-205ENST00000467378 SPANXA1Q9NS26 97 aa12.61□□□□□ -0.39
USP11-205ENST00000467378 WFDC2Q14508 124 aa12.6□□□□□ -0.39
USP11-205ENST00000467378 C2orf66Q6UXQ4 117 aa12.6□□□□□ -0.39
USP11-205ENST00000467378 BAALCQ8WXS3 180 aa12.6□□□□□ -0.39
USP11-205ENST00000467378 PGPEP1Q9NXJ5 209 aa12.6□□□□□ -0.39
USP11-205ENST00000467378 LINC00959A0A1B0GUT2 108 aa12.59□□□□□ -0.39
USP11-205ENST00000467378 EREGO14944 169 aa12.59□□□□□ -0.39
USP11-205ENST00000467378 URB1-AS1Q96HZ7 61 aa12.59□□□□□ -0.39
USP11-205ENST00000467378 PYGO1Q9Y3Y4 419 aa12.59□□□□□ -0.39
USP11-205ENST00000467378 MRPS36P82909 103 aaKnown RBP12.58□□□□□ -0.4
USP11-205ENST00000467378 RNASE13Q5GAN3 156 aaKnown RBP12.58□□□□□ -0.4
USP11-205ENST00000467378 Q6ZUT4 128 aa12.58□□□□□ -0.4
USP11-205ENST00000467378 OPRPNQ99935 248 aaPredicted RBP12.58□□□□□ -0.4
USP11-205ENST00000467378 CYSLTR1Q9Y271 337 aa12.58□□□□□ -0.4
USP11-205ENST00000467378 TRGC2P03986 189 aa12.57□□□□□ -0.4
USP11-205ENST00000467378 FAM229AH3BQW9 127 aa12.56□□□□□ -0.4
USP11-205ENST00000467378 LECT2O14960 151 aa12.56□□□□□ -0.4
USP11-205ENST00000467378 G0S2P27469 103 aa12.56□□□□□ -0.4
USP11-205ENST00000467378 FA2HQ7L5A8 372 aa12.56□□□□□ -0.4
USP11-205ENST00000467378 Q8N814 137 aa12.56□□□□□ -0.4
USP11-205ENST00000467378 CHCHD10Q8WYQ3 142 aaPredicted RBP12.56□□□□□ -0.4
USP11-205ENST00000467378 LINC00614P0C842 121 aa12.55□□□□□ -0.4
USP11-205ENST00000467378 S100A1P23297 94 aa12.55□□□□□ -0.4
USP11-205ENST00000467378 TOMM6Q96B49 74 aa12.55□□□□□ -0.4
USP11-205ENST00000467378 IGLV4-3A0A075B6K6 122 aa12.54□□□□□ -0.4
USP11-205ENST00000467378 GAGE12HA6NDE8 117 aa12.54□□□□□ -0.4
USP11-205ENST00000467378 IGIPA6NJ69 53 aa12.54□□□□□ -0.4
USP11-205ENST00000467378 ATP6V1G1O75348 118 aa12.54□□□□□ -0.4
USP11-205ENST00000467378 SS18Q15532 418 aa12.54□□□□□ -0.4
USP11-205ENST00000467378 CDPF1Q6NVV7 123 aa12.54□□□□□ -0.4
USP11-205ENST00000467378 CCL25O15444 150 aa12.53□□□□□ -0.4
USP11-205ENST00000467378 AP5S1Q9NUS5 200 aa12.53□□□□□ -0.4
USP11-205ENST00000467378 NPSP0C0P6 89 aa12.52□□□□□ -0.41
USP11-205ENST00000467378 KRTAP10-1P60331 282 aa12.52□□□□□ -0.41
USP11-205ENST00000467378 FOXI1Q12951 378 aa12.52□□□□□ -0.41
USP11-205ENST00000467378 TMEM141Q96I45 108 aa12.52□□□□□ -0.41
USP11-205ENST00000467378 TRAV13-1A0A0B4J241 112 aa12.51□□□□□ -0.41
USP11-205ENST00000467378 C1orf196B1AJZ1 125 aa12.51□□□□□ -0.41
USP11-205ENST00000467378 USP17L23D6RBM5 183 aa12.51□□□□□ -0.41
USP11-205ENST00000467378 RAB5BP61020 215 aa12.51□□□□□ -0.41
USP11-205ENST00000467378 TIMM17AQ99595 171 aa12.51□□□□□ -0.41
USP11-205ENST00000467378 A0A096LNJ9 63 aa12.5□□□□□ -0.41
USP11-205ENST00000467378 LINC01549A6NIU2 74 aa12.5□□□□□ -0.41
USP11-205ENST00000467378 XCL1P47992 114 aa12.5□□□□□ -0.41
USP11-205ENST00000467378 ERASQ7Z444 233 aa12.5□□□□□ -0.41
USP11-205ENST00000467378 AMELXQ99217 191 aa12.5□□□□□ -0.41
USP11-205ENST00000467378 CD164L2Q6UWJ8 174 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms