RNA–Protein interactions for RNA: ENST00000465871.1

SSB-207, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 421 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-207ENST00000465871 MYOZ3Q8TDC0 251 aa-0.06□□□□□ -2.42
SSB-207ENST00000465871 C1orf54Q8WWF1 131 aa-0.06□□□□□ -2.42
SSB-207ENST00000465871 AMELXQ99217 191 aa-0.06□□□□□ -2.42
SSB-207ENST00000465871 CPSF1Q10570 1443 aaKnown RBP-0.06□□□□□ -2.42
SSB-207ENST00000465871 BIVM-ERCC5R4GMW8 1640 aa-0.06□□□□□ -2.42
SSB-207ENST00000465871 ZNF236Q9UL36 1845 aa-0.06□□□□□ -2.42
SSB-207ENST00000465871 USF3Q68DE3 2245 aa-0.06□□□□□ -2.42
SSB-207ENST00000465871 ROCK2O75116 1388 aaKnown RBP-0.06□□□□□ -2.42
SSB-207ENST00000465871 CACNA1AO00555 2505 aa-0.07□□□□□ -2.42
SSB-207ENST00000465871 MYH7P12883 1935 aa-0.07□□□□□ -2.42
SSB-207ENST00000465871 PATJQ8NI35 1801 aa-0.07□□□□□ -2.42
SSB-207ENST00000465871 WNK3Q9BYP7 1800 aa-0.07□□□□□ -2.42
SSB-207ENST00000465871 OOSP1A8MZH6 123 aa-0.07□□□□□ -2.42
SSB-207ENST00000465871 HMGN4O00479 90 aa-0.07□□□□□ -2.42
SSB-207ENST00000465871 SSSCA1O60232 199 aa-0.07□□□□□ -2.42
SSB-207ENST00000465871 SPRR1AP35321 89 aa-0.07□□□□□ -2.42
SSB-207ENST00000465871 KRTAP6-1Q3LI64 71 aa-0.07□□□□□ -2.42
SSB-207ENST00000465871 PIGYQ3MUY2 71 aa-0.07□□□□□ -2.42
SSB-207ENST00000465871 Q5VSD8 79 aa-0.07□□□□□ -2.42
SSB-207ENST00000465871 COMMD6Q7Z4G1 85 aa-0.07□□□□□ -2.42
SSB-207ENST00000465871 C5orf38Q86SI9 138 aa-0.07□□□□□ -2.42
SSB-207ENST00000465871 PP6455Q8WZ26 134 aa-0.07□□□□□ -2.42
SSB-207ENST00000465871 LINC01558Q9Y6Z2 57 aa-0.07□□□□□ -2.42
SSB-207ENST00000465871 LRP6O75581 1613 aa-0.07□□□□□ -2.42
SSB-207ENST00000465871 DCHS2Q6V1P9 2916 aa-0.07□□□□□ -2.42
SSB-207ENST00000465871 KTN1Q86UP2 1357 aaKnown RBP-0.07□□□□□ -2.42
SSB-207ENST00000465871 GOLGA4Q13439 2230 aaKnown RBP-0.07□□□□□ -2.42
SSB-207ENST00000465871 PKD1L1Q8TDX9 2849 aa-0.08□□□□□ -2.42
SSB-207ENST00000465871 SSPOA2VEC9 5147 aa-0.08□□□□□ -2.42
SSB-207ENST00000465871 MBD5Q9P267 1494 aa-0.08□□□□□ -2.42
SSB-207ENST00000465871 TENM4Q6N022 2769 aa-0.08□□□□□ -2.42
SSB-207ENST00000465871 TRBV6-1A0A0K0K1D8 114 aa-0.08□□□□□ -2.42
SSB-207ENST00000465871 LOC285095A0A1B0GVY8 99 aa-0.08□□□□□ -2.42
SSB-207ENST00000465871 CHKB-CPT1BH3BT56 60 aa-0.08□□□□□ -2.42
SSB-207ENST00000465871 SFT2D2O95562 160 aa-0.08□□□□□ -2.42
SSB-207ENST00000465871 C9orf153Q5TBE3 101 aa-0.08□□□□□ -2.42
SSB-207ENST00000465871 RPL13AP3Q6NVV1 102 aa-0.08□□□□□ -2.42
SSB-207ENST00000465871 LINC00472Q9H8W2 130 aa-0.08□□□□□ -2.42
SSB-207ENST00000465871 LINC00474Q9P2X8 69 aa-0.08□□□□□ -2.42
SSB-207ENST00000465871 HMCN2Q8NDA2 5059 aa-0.08□□□□□ -2.42
SSB-207ENST00000465871 SPTBN1Q01082 2364 aaKnown RBP-0.08□□□□□ -2.42
SSB-207ENST00000465871 C10orf71Q711Q0 1435 aa-0.08□□□□□ -2.42
SSB-207ENST00000465871 PLXNB2O15031 1838 aa-0.08□□□□□ -2.42
SSB-207ENST00000465871 DOCK2Q92608 1830 aa-0.08□□□□□ -2.42
SSB-207ENST00000465871 KDM3BQ7LBC6 1761 aa-0.09□□□□□ -2.42
SSB-207ENST00000465871 PIEZO2Q9H5I5 2752 aa-0.09□□□□□ -2.42
SSB-207ENST00000465871 PHLPP1O60346 1717 aa-0.09□□□□□ -2.42
SSB-207ENST00000465871 FAIMQ9NVQ4 179 aa-0.09□□□□□ -2.42
SSB-207ENST00000465871 UQCR10Q9UDW1 63 aa-0.09□□□□□ -2.42
SSB-207ENST00000465871 ZANQ9Y493 2812 aa-0.09□□□□□ -2.42
SSB-207ENST00000465871 MYO7BQ6PIF6 2116 aa-0.1□□□□□ -2.42
SSB-207ENST00000465871 LRRC37A2A6NM11 1700 aa-0.1□□□□□ -2.42
SSB-207ENST00000465871 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.1□□□□□ -2.42
SSB-207ENST00000465871 CHD6Q8TD26 2715 aa-0.1□□□□□ -2.43
SSB-207ENST00000465871 FAM24AA6NFZ4 105 aa-0.1□□□□□ -2.43
SSB-207ENST00000465871 GNG11P61952 73 aa-0.1□□□□□ -2.43
SSB-207ENST00000465871 UBA52P62987 128 aaKnown RBP-0.1□□□□□ -2.43
SSB-207ENST00000465871 FOCADQ5VW36 1801 aa-0.1□□□□□ -2.43
SSB-207ENST00000465871 PPRC1Q5VV67 1664 aaKnown RBP-0.11□□□□□ -2.43
SSB-207ENST00000465871 UBE2L5PA0A1B0GUS4 154 aa-0.11□□□□□ -2.43
SSB-207ENST00000465871 A0A1B0GV90 55 aa-0.11□□□□□ -2.43
SSB-207ENST00000465871 I3L2K1 104 aa-0.11□□□□□ -2.43
SSB-207ENST00000465871 MGPP08493 103 aa-0.11□□□□□ -2.43
SSB-207ENST00000465871 UBE2L3P68036 154 aaKnown RBP-0.11□□□□□ -2.43
SSB-207ENST00000465871 SVBPQ8N300 66 aa-0.11□□□□□ -2.43
SSB-207ENST00000465871 FDCSPQ8NFU4 85 aa-0.11□□□□□ -2.43
SSB-207ENST00000465871 NXT2Q9NPJ8 142 aaKnown RBP-0.11□□□□□ -2.43
SSB-207ENST00000465871 MANBALQ9NQG1 85 aa-0.11□□□□□ -2.43
SSB-207ENST00000465871 ARL2-SNX15V9GYD0 113 aa-0.11□□□□□ -2.43
SSB-207ENST00000465871 BSNQ9UPA5 3926 aa-0.11□□□□□ -2.43
SSB-207ENST00000465871 SHANK2Q9UPX8 1470 aa-0.11□□□□□ -2.43
SSB-207ENST00000465871 VWFP04275 2813 aa-0.11□□□□□ -2.43
SSB-207ENST00000465871 KIF21AQ7Z4S6 1674 aa-0.11□□□□□ -2.43
SSB-207ENST00000465871 LAMC1P11047 1609 aa-0.12□□□□□ -2.43
SSB-207ENST00000465871 EFCAB10A6NFE3 127 aa-0.12□□□□□ -2.43
SSB-207ENST00000465871 IGLC1P0CG04 106 aa-0.12□□□□□ -2.43
SSB-207ENST00000465871 SFTA2Q6UW10 78 aa-0.12□□□□□ -2.43
SSB-207ENST00000465871 DPH3P1Q9H4G8 78 aa-0.12□□□□□ -2.43
SSB-207ENST00000465871 POLA1P09884 1462 aaPredicted RBP-0.12□□□□□ -2.43
SSB-207ENST00000465871 HSPG2P98160 4391 aa-0.12□□□□□ -2.43
SSB-207ENST00000465871 PSME4Q14997 1843 aa-0.13□□□□□ -2.43
SSB-207ENST00000465871 LOC730098B7Z3J9 87 aa-0.13□□□□□ -2.43
SSB-207ENST00000465871 F6UZH7 168 aa-0.13□□□□□ -2.43
SSB-207ENST00000465871 DLEU1O43261 78 aa-0.13□□□□□ -2.43
SSB-207ENST00000465871 S100A1P23297 94 aa-0.13□□□□□ -2.43
SSB-207ENST00000465871 WHAMMP3Q1A5X7 153 aa-0.13□□□□□ -2.43
SSB-207ENST00000465871 FAM223AQ8IWN6 122 aa-0.13□□□□□ -2.43
SSB-207ENST00000465871 TMEM263Q8WUH6 116 aaKnown RBP-0.13□□□□□ -2.43
SSB-207ENST00000465871 FXYD6Q9H0Q3 95 aa-0.13□□□□□ -2.43
SSB-207ENST00000465871 GVINP1Q7Z2Y8 2422 aa-0.13□□□□□ -2.43
SSB-207ENST00000465871 CSPG4Q6UVK1 2322 aa-0.13□□□□□ -2.43
SSB-207ENST00000465871 SBF2Q86WG5 1849 aa-0.13□□□□□ -2.43
SSB-207ENST00000465871 MAP1BP46821 2468 aaKnown RBP-0.13□□□□□ -2.43
SSB-207ENST00000465871 RIMS1Q86UR5 1692 aaKnown RBP-0.14□□□□□ -2.43
SSB-207ENST00000465871 A2ML1A8K2U0 1454 aa-0.14□□□□□ -2.43
SSB-207ENST00000465871 FAT2Q9NYQ8 4349 aa-0.14□□□□□ -2.43
SSB-207ENST00000465871 K7EQZ3 153 aa-0.14□□□□□ -2.43
SSB-207ENST00000465871 PRM1P04553 51 aa-0.14□□□□□ -2.43
SSB-207ENST00000465871 TRAPPC2P0DI81 140 aa-0.14□□□□□ -2.43
SSB-207ENST00000465871 TRAPPC2BP0DI82 140 aa-0.14□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms