RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 ENHOQ6UWT2 76 aa11.31□□□□□ -0.6
VPS52-215ENST00000464425 MRPL52Q86TS9 123 aaKnown RBP11.31□□□□□ -0.6
VPS52-215ENST00000464425 MAPKAPK5-AS1Q8N8E1 139 aa11.31□□□□□ -0.6
VPS52-215ENST00000464425 PRSS3P2Q8NHM4 247 aa11.31□□□□□ -0.6
VPS52-215ENST00000464425 LECT2O14960 151 aa11.3□□□□□ -0.6
VPS52-215ENST00000464425 CRPP02741 224 aa11.3□□□□□ -0.6
VPS52-215ENST00000464425 TRGC2P03986 189 aa11.3□□□□□ -0.6
VPS52-215ENST00000464425 FGF6P10767 208 aa11.3□□□□□ -0.6
VPS52-215ENST00000464425 Q0VG73 95 aa11.3□□□□□ -0.6
VPS52-215ENST00000464425 ORMDL2Q53FV1 153 aa11.3□□□□□ -0.6
VPS52-215ENST00000464425 AMMECR1LQ6DCA0 310 aa11.3□□□□□ -0.6
VPS52-215ENST00000464425 CLPSL2Q6UWE3 100 aa11.3□□□□□ -0.6
VPS52-215ENST00000464425 C18orf32Q8TCD1 76 aa11.3□□□□□ -0.6
VPS52-215ENST00000464425 CSDC2Q9Y534 153 aaKnown RBP11.3□□□□□ -0.6
VPS52-215ENST00000464425 COX11Q9Y6N1 276 aa11.3□□□□□ -0.6
VPS52-215ENST00000464425 WFDC2Q14508 124 aa11.29□□□□□ -0.6
VPS52-215ENST00000464425 LINC00269Q8N2A0 174 aa11.29□□□□□ -0.6
VPS52-215ENST00000464425 BAALCQ8WXS3 180 aa11.29□□□□□ -0.6
VPS52-215ENST00000464425 TIMM21Q9BVV7 248 aa11.29□□□□□ -0.6
VPS52-215ENST00000464425 IGLV4-60A0A075B6I1 120 aa11.28□□□□□ -0.6
VPS52-215ENST00000464425 G0S2P27469 103 aa11.28□□□□□ -0.6
VPS52-215ENST00000464425 Q8N814 137 aa11.28□□□□□ -0.6
VPS52-215ENST00000464425 TMEM101Q96IK0 257 aa11.28□□□□□ -0.6
VPS52-215ENST00000464425 C1orf43Q9BWL3 253 aa11.28□□□□□ -0.6
VPS52-215ENST00000464425 PRR34Q9NV39 138 aa11.28□□□□□ -0.6
VPS52-215ENST00000464425 HERC2O95714 4834 aa11.27□□□□□ -0.6
VPS52-215ENST00000464425 CDPF1Q6NVV7 123 aa11.27□□□□□ -0.61
VPS52-215ENST00000464425 RNASEKQ6P5S7 137 aaKnown RBP11.27□□□□□ -0.61
VPS52-215ENST00000464425 UBE2D4Q9Y2X8 147 aa11.27□□□□□ -0.61
VPS52-215ENST00000464425 FA2HQ7L5A8 372 aa11.26□□□□□ -0.61
VPS52-215ENST00000464425 OR5A1Q8NGJ0 315 aa11.26□□□□□ -0.61
VPS52-215ENST00000464425 IGLV5-52A0A0A0MRZ9 124 aa11.25□□□□□ -0.61
VPS52-215ENST00000464425 LINC00614P0C842 121 aa11.25□□□□□ -0.61
VPS52-215ENST00000464425 RAB5BP61020 215 aa11.25□□□□□ -0.61
VPS52-215ENST00000464425 RPL39P62891 51 aaKnown RBP11.25□□□□□ -0.61
VPS52-215ENST00000464425 REG3AQ06141 175 aa11.25□□□□□ -0.61
VPS52-215ENST00000464425 MIAQ16674 131 aa11.25□□□□□ -0.61
VPS52-215ENST00000464425 DGAT2L7PQ6IED9 249 aa11.25□□□□□ -0.61
VPS52-215ENST00000464425 CDC42SE2Q9NRR3 84 aa11.25□□□□□ -0.61
VPS52-215ENST00000464425 SPANXA1Q9NS26 97 aa11.25□□□□□ -0.61
VPS52-215ENST00000464425 LINC01549A6NIU2 74 aa11.24□□□□□ -0.61
VPS52-215ENST00000464425 C2orf66Q6UXQ4 117 aa11.24□□□□□ -0.61
VPS52-215ENST00000464425 ZNF664Q8N3J9 261 aa11.24□□□□□ -0.61
VPS52-215ENST00000464425 AP5S1Q9NUS5 200 aa11.24□□□□□ -0.61
VPS52-215ENST00000464425 CYSLTR1Q9Y271 337 aa11.24□□□□□ -0.61
VPS52-215ENST00000464425 PYGO1Q9Y3Y4 419 aa11.24□□□□□ -0.61
VPS52-215ENST00000464425 HSPG2P98160 4391 aa11.23□□□□□ -0.61
VPS52-215ENST00000464425 KRTAP10-1P60331 282 aa11.23□□□□□ -0.61
VPS52-215ENST00000464425 NTN5Q8WTR8 489 aaPredicted RBP11.23□□□□□ -0.61
VPS52-215ENST00000464425 URB1-AS1Q96HZ7 61 aa11.23□□□□□ -0.61
VPS52-215ENST00000464425 APOBP04114 4563 aaKnown RBP11.22□□□□□ -0.61
VPS52-215ENST00000464425 IGLV10-54A0A075B6I4 117 aa11.22□□□□□ -0.61
VPS52-215ENST00000464425 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.22□□□□□ -0.61
VPS52-215ENST00000464425 NPSP0C0P6 89 aa11.22□□□□□ -0.61
VPS52-215ENST00000464425 GCSHP23434 173 aa11.22□□□□□ -0.61
VPS52-215ENST00000464425 MRPS36P82909 103 aaKnown RBP11.22□□□□□ -0.61
VPS52-215ENST00000464425 TOMM6Q96B49 74 aa11.22□□□□□ -0.61
VPS52-215ENST00000464425 RYR1P21817 5038 aa11.22□□□□□ -0.61
VPS52-215ENST00000464425 TRAV8-4A0A0B4J246 113 aa11.21□□□□□ -0.61
VPS52-215ENST00000464425 CDK2AP2O75956 126 aa11.21□□□□□ -0.61
VPS52-215ENST00000464425 CHCHD1Q96BP2 118 aaKnown RBP11.21□□□□□ -0.61
VPS52-215ENST00000464425 IGKV3OR2-268A0A0C4DH90 116 aa11.2□□□□□ -0.62
VPS52-215ENST00000464425 FAM104AQ969W3 186 aa11.2□□□□□ -0.62
VPS52-215ENST00000464425 IGIPA6NJ69 53 aa11.19□□□□□ -0.62
VPS52-215ENST00000464425 KRTAP26-1Q6PEX3 210 aa11.19□□□□□ -0.62
VPS52-215ENST00000464425 BAGE3Q86Y29 109 aa11.19□□□□□ -0.62
VPS52-215ENST00000464425 CCL25O15444 150 aa11.18□□□□□ -0.62
VPS52-215ENST00000464425 ERASQ7Z444 233 aa11.18□□□□□ -0.62
VPS52-215ENST00000464425 TIMM17AQ99595 171 aa11.18□□□□□ -0.62
VPS52-215ENST00000464425 USP17L23D6RBM5 183 aa11.17□□□□□ -0.62
VPS52-215ENST00000464425 Q6ZUT4 128 aa11.17□□□□□ -0.62
VPS52-215ENST00000464425 TMEM141Q96I45 108 aa11.17□□□□□ -0.62
VPS52-215ENST00000464425 IGLV4-3A0A075B6K6 122 aa11.16□□□□□ -0.62
VPS52-215ENST00000464425 A0A096LNJ9 63 aa11.16□□□□□ -0.62
VPS52-215ENST00000464425 LINC00959A0A1B0GUT2 108 aa11.16□□□□□ -0.62
VPS52-215ENST00000464425 HIST1H2BKO60814 126 aa11.16□□□□□ -0.62
VPS52-215ENST00000464425 HIST1H2BJP06899 126 aa11.16□□□□□ -0.62
VPS52-215ENST00000464425 HIST1H2BOP23527 126 aa11.16□□□□□ -0.62
VPS52-215ENST00000464425 HIST1H2BBP33778 126 aa11.16□□□□□ -0.62
VPS52-215ENST00000464425 HIST1H2BDP58876 126 aa11.16□□□□□ -0.62
VPS52-215ENST00000464425 HIST1H2BCP62807 126 aa11.16□□□□□ -0.62
VPS52-215ENST00000464425 HIST2H2BEQ16778 126 aa11.16□□□□□ -0.62
VPS52-215ENST00000464425 PAPPA-AS1Q5QFB9 102 aa11.16□□□□□ -0.62
VPS52-215ENST00000464425 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.16□□□□□ -0.62
VPS52-215ENST00000464425 HIST1H2BHQ93079 126 aa11.16□□□□□ -0.62
VPS52-215ENST00000464425 HIST1H2BNQ99877 126 aa11.16□□□□□ -0.62
VPS52-215ENST00000464425 HIST1H2BMQ99879 126 aa11.16□□□□□ -0.62
VPS52-215ENST00000464425 OPRPNQ99935 248 aaPredicted RBP11.16□□□□□ -0.62
VPS52-215ENST00000464425 HBDP02042 147 aa11.15□□□□□ -0.62
VPS52-215ENST00000464425 SCGB3A1Q96QR1 104 aa11.15□□□□□ -0.62
VPS52-215ENST00000464425 KRTAP17-1Q9BYP8 105 aa11.15□□□□□ -0.62
VPS52-215ENST00000464425 C1orf196B1AJZ1 125 aa11.14□□□□□ -0.63
VPS52-215ENST00000464425 SS18Q15532 418 aa11.14□□□□□ -0.63
VPS52-215ENST00000464425 LINC01620Q4KN68 170 aa11.14□□□□□ -0.63
VPS52-215ENST00000464425 C14orf177Q52M58 125 aa11.14□□□□□ -0.63
VPS52-215ENST00000464425 RNASE13Q5GAN3 156 aaKnown RBP11.14□□□□□ -0.63
VPS52-215ENST00000464425 Q6ZN92 141 aa11.14□□□□□ -0.63
VPS52-215ENST00000464425 PDZD11Q5EBL8 140 aa11.13□□□□□ -0.63
VPS52-215ENST00000464425 TEX43Q6ZNM6 134 aa11.13□□□□□ -0.63
VPS52-215ENST00000464425 CHCHD10Q8WYQ3 142 aaPredicted RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms