RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 NAV3Q8IVL0 2385 aa11.69□□□□□ -0.54
SMC4-204ENST00000462787 C4orf3Q8WVX3 66 aa11.68□□□□□ -0.54
SMC4-204ENST00000462787 UBE2BP63146 152 aa11.68□□□□□ -0.54
SMC4-204ENST00000462787 SMIM26A0A096LP01 95 aa11.68□□□□□ -0.54
SMC4-204ENST00000462787 FAM19A5Q7Z5A7 132 aaPredicted RBP11.68□□□□□ -0.54
SMC4-204ENST00000462787 TRBV7-7A0A0K0K1E9 115 aa11.68□□□□□ -0.54
SMC4-204ENST00000462787 TNFRSF13BO14836 293 aaPredicted RBP11.68□□□□□ -0.54
SMC4-204ENST00000462787 PROK1P58294 105 aa11.68□□□□□ -0.54
SMC4-204ENST00000462787 Q6ZTI0 123 aa11.68□□□□□ -0.54
SMC4-204ENST00000462787 SMIM11BQ8TCY0 68 aa11.67□□□□□ -0.54
SMC4-204ENST00000462787 Q96MF0 132 aa11.67□□□□□ -0.54
SMC4-204ENST00000462787 IGKV2D-24A0A075B6R9 120 aa11.67□□□□□ -0.54
SMC4-204ENST00000462787 HRCT1Q6UXD1 115 aa11.67□□□□□ -0.54
SMC4-204ENST00000462787 A0A0U1RQV1 116 aa11.66□□□□□ -0.54
SMC4-204ENST00000462787 ANKHD1Q8IWZ3 2542 aaKnown RBP11.66□□□□□ -0.54
SMC4-204ENST00000462787 UBE2DNLQ8IWF7 75 aa11.65□□□□□ -0.54
SMC4-204ENST00000462787 PRO0255Q9UI72 69 aa11.65□□□□□ -0.54
SMC4-204ENST00000462787 SERP1Q9Y6X1 66 aa11.65□□□□□ -0.54
SMC4-204ENST00000462787 SMCPP49901 116 aaPredicted RBP11.65□□□□□ -0.54
SMC4-204ENST00000462787 CSDC2Q9Y534 153 aaKnown RBP11.64□□□□□ -0.55
SMC4-204ENST00000462787 NRGNQ92686 78 aa11.64□□□□□ -0.55
SMC4-204ENST00000462787 COL5A1P20908 1838 aaPredicted RBP11.64□□□□□ -0.55
SMC4-204ENST00000462787 Q8NA96 180 aa11.64□□□□□ -0.55
SMC4-204ENST00000462787 PRB2P02812 416 aaPredicted RBP11.63□□□□□ -0.55
SMC4-204ENST00000462787 CCKP06307 115 aa11.63□□□□□ -0.55
SMC4-204ENST00000462787 C6orf99Q4VX62 202 aa11.63□□□□□ -0.55
SMC4-204ENST00000462787 LRP4O75096 1905 aa11.63□□□□□ -0.55
SMC4-204ENST00000462787 RPL28P46779 137 aaKnown RBP11.63□□□□□ -0.55
SMC4-204ENST00000462787 SPART-AS1P0CW21 52 aa11.63□□□□□ -0.55
SMC4-204ENST00000462787 SNURFQ9Y675 71 aa11.63□□□□□ -0.55
SMC4-204ENST00000462787 PTPRSQ13332 1948 aa11.62□□□□□ -0.55
SMC4-204ENST00000462787 WFDC11Q8NEX6 87 aa11.62□□□□□ -0.55
SMC4-204ENST00000462787 TRAV7A0A075B6U4 112 aa11.62□□□□□ -0.55
SMC4-204ENST00000462787 SCXQ7RTU7 201 aa11.62□□□□□ -0.55
SMC4-204ENST00000462787 TRBV6-4A0A1B0GX49 114 aa11.61□□□□□ -0.55
SMC4-204ENST00000462787 ADAMTSL4-AS1Q5T5F5 129 aa11.61□□□□□ -0.55
SMC4-204ENST00000462787 F8W735 103 aaPredicted RBP11.61□□□□□ -0.55
SMC4-204ENST00000462787 NDUFB1O75438 58 aa11.61□□□□□ -0.55
SMC4-204ENST00000462787 AMELXQ99217 191 aa11.61□□□□□ -0.55
SMC4-204ENST00000462787 TRBV6-8A0A0A6YYG3 113 aa11.6□□□□□ -0.55
SMC4-204ENST00000462787 SHISA2Q6UWI4 295 aa11.6□□□□□ -0.55
SMC4-204ENST00000462787 MRPL55Q7Z7F7 128 aaKnown RBP11.6□□□□□ -0.55
SMC4-204ENST00000462787 C1orf195Q5TG92 126 aa11.6□□□□□ -0.55
SMC4-204ENST00000462787 DCANP1Q8TF63 244 aa11.59□□□□□ -0.55
SMC4-204ENST00000462787 PPDPFQ9H3Y8 114 aa11.59□□□□□ -0.55
SMC4-204ENST00000462787 Q6ZSV7 163 aa11.59□□□□□ -0.55
SMC4-204ENST00000462787 NDUFS5O43920 106 aa11.59□□□□□ -0.55
SMC4-204ENST00000462787 KLK12Q9UKR0 248 aa11.59□□□□□ -0.55
SMC4-204ENST00000462787 LINC00242Q5T6M2 205 aa11.58□□□□□ -0.56
SMC4-204ENST00000462787 CHCHD10Q8WYQ3 142 aaPredicted RBP11.58□□□□□ -0.56
SMC4-204ENST00000462787 REG3AQ06141 175 aa11.58□□□□□ -0.56
SMC4-204ENST00000462787 FAM19A3Q7Z5A8 133 aa11.58□□□□□ -0.56
SMC4-204ENST00000462787 SBSPONQ8IVN8 264 aa11.58□□□□□ -0.56
SMC4-204ENST00000462787 LINC00269Q8N2A0 174 aa11.58□□□□□ -0.56
SMC4-204ENST00000462787 CCL18P55774 89 aa11.58□□□□□ -0.56
SMC4-204ENST00000462787 DEFB114Q30KQ6 69 aa11.57□□□□□ -0.56
SMC4-204ENST00000462787 KLK5Q9Y337 293 aaPredicted RBP11.57□□□□□ -0.56
SMC4-204ENST00000462787 A0A087WVE0 104 aa11.57□□□□□ -0.56
SMC4-204ENST00000462787 PRORYQ9H606 182 aa11.57□□□□□ -0.56
SMC4-204ENST00000462787 LOC107984640A0A0U1RRK4 108 aa11.56□□□□□ -0.56
SMC4-204ENST00000462787 SMIM1B2RUZ4 78 aa11.56□□□□□ -0.56
SMC4-204ENST00000462787 C11orf71Q6IPW1 123 aa11.56□□□□□ -0.56
SMC4-204ENST00000462787 CDC42SE2Q9NRR3 84 aa11.55□□□□□ -0.56
SMC4-204ENST00000462787 MRGPRG-AS1Q2M3A8 158 aa11.55□□□□□ -0.56
SMC4-204ENST00000462787 MIFP14174 115 aa11.55□□□□□ -0.56
SMC4-204ENST00000462787 ESM1Q9NQ30 184 aa11.55□□□□□ -0.56
SMC4-204ENST00000462787 Q6ZQY7 126 aa11.54□□□□□ -0.56
SMC4-204ENST00000462787 ARHGAP32A7KAX9 2087 aa11.54□□□□□ -0.56
SMC4-204ENST00000462787 C9orf66Q5T8R8 295 aa11.54□□□□□ -0.56
SMC4-204ENST00000462787 CHCHD7Q9BUK0 85 aa11.54□□□□□ -0.56
SMC4-204ENST00000462787 ZNF580Q9UK33 172 aa11.53□□□□□ -0.56
SMC4-204ENST00000462787 SPTSSBQ8NFR3 76 aa11.53□□□□□ -0.56
SMC4-204ENST00000462787 IGLV1-40P01703 118 aa11.52□□□□□ -0.56
SMC4-204ENST00000462787 COX17Q14061 63 aa11.52□□□□□ -0.56
SMC4-204ENST00000462787 CRYGAP11844 174 aa11.52□□□□□ -0.57
SMC4-204ENST00000462787 RPS28P62857 69 aaKnown RBP11.51□□□□□ -0.57
SMC4-204ENST00000462787 MUC7Q8TAX7 377 aa11.51□□□□□ -0.57
SMC4-204ENST00000462787 NTM-AS1Q6ZSK4 140 aa11.51□□□□□ -0.57
SMC4-204ENST00000462787 LINC00959A0A1B0GUT2 108 aa11.5□□□□□ -0.57
SMC4-204ENST00000462787 A0A087WYN8 130 aa11.5□□□□□ -0.57
SMC4-204ENST00000462787 CD164L2Q6UWJ8 174 aa11.5□□□□□ -0.57
SMC4-204ENST00000462787 AGRNO00468 2067 aa11.5□□□□□ -0.57
SMC4-204ENST00000462787 CHKB-CPT1BH3BT56 60 aa11.5□□□□□ -0.57
SMC4-204ENST00000462787 Q8IZM0 81 aa11.49□□□□□ -0.57
SMC4-204ENST00000462787 Q8N814 137 aa11.49□□□□□ -0.57
SMC4-204ENST00000462787 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.49□□□□□ -0.57
SMC4-204ENST00000462787 KIF25-AS1Q9Y6Z4 181 aa11.48□□□□□ -0.57
SMC4-204ENST00000462787 EXPH5Q8NEV8 1989 aa11.48□□□□□ -0.57
SMC4-204ENST00000462787 DEFB113Q30KQ7 82 aa11.48□□□□□ -0.57
SMC4-204ENST00000462787 SRCAPQ6ZRS2 3230 aa11.48□□□□□ -0.57
SMC4-204ENST00000462787 COX6A2Q02221 97 aa11.47□□□□□ -0.57
SMC4-204ENST00000462787 LYRM9A8MSI8 78 aa11.47□□□□□ -0.57
SMC4-204ENST00000462787 Q6YL49 198 aa11.47□□□□□ -0.57
SMC4-204ENST00000462787 LINC00846Q9NV44 126 aa11.46□□□□□ -0.57
SMC4-204ENST00000462787 DEFB135Q30KP9 77 aa11.45□□□□□ -0.58
SMC4-204ENST00000462787 BRI3O95415 125 aa11.45□□□□□ -0.58
SMC4-204ENST00000462787 DSCAMO60469 2012 aa11.45□□□□□ -0.58
SMC4-204ENST00000462787 DEFB121Q5J5C9 76 aa11.45□□□□□ -0.58
SMC4-204ENST00000462787 WNK1Q9H4A3 2382 aa11.44□□□□□ -0.58
SMC4-204ENST00000462787 C10orf99Q6UWK7 81 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms