RNA–Protein interactions for RNA: ENST00000462668.5

SMC4-203, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 4,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-203ENST00000462668 PRB1P04280 392 aa1.26□□□□□ -2.21
SMC4-203ENST00000462668 ETV6P41212 452 aa1.26□□□□□ -2.21
SMC4-203ENST00000462668 WHAMMP3Q1A5X7 153 aa1.26□□□□□ -2.21
SMC4-203ENST00000462668 KRTAP5-5Q701N2 237 aaPredicted RBP1.26□□□□□ -2.21
SMC4-203ENST00000462668 CCDC167Q9P0B6 97 aa1.26□□□□□ -2.21
SMC4-203ENST00000462668 LINC01545Q5VT33 79 aa1.25□□□□□ -2.21
SMC4-203ENST00000462668 FLNBO75369 2602 aaKnown RBP1.25□□□□□ -2.21
SMC4-203ENST00000462668 CCDC179H3BU77 68 aa1.25□□□□□ -2.21
SMC4-203ENST00000462668 J3QR89 54 aa1.25□□□□□ -2.21
SMC4-203ENST00000462668 NUPR1O60356 82 aa1.25□□□□□ -2.21
SMC4-203ENST00000462668 IGHV3-30P01768 117 aa1.25□□□□□ -2.21
SMC4-203ENST00000462668 IGHV3-30-5P0DP03 117 aa1.25□□□□□ -2.21
SMC4-203ENST00000462668 Q6ZUT4 128 aa1.25□□□□□ -2.21
SMC4-203ENST00000462668 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.25□□□□□ -2.21
SMC4-203ENST00000462668 MDC1Q14676 2089 aaKnown RBP1.25□□□□□ -2.21
SMC4-203ENST00000462668 LSM3P62310 102 aaKnown RBP1.25□□□□□ -2.21
SMC4-203ENST00000462668 AGPAT4-IT1Q9H0P7 198 aa1.25□□□□□ -2.21
SMC4-203ENST00000462668 RERGLQ9H628 205 aa1.25□□□□□ -2.21
SMC4-203ENST00000462668 RPRMQ9NS64 109 aa1.25□□□□□ -2.21
SMC4-203ENST00000462668 TMEM106BQ9NUM4 274 aa1.25□□□□□ -2.21
SMC4-203ENST00000462668 BOKQ9UMX3 212 aaPredicted RBP1.25□□□□□ -2.21
SMC4-203ENST00000462668 PYYP10082 97 aa1.24□□□□□ -2.21
SMC4-203ENST00000462668 HINT1P49773 126 aaPredicted RBP1.24□□□□□ -2.21
SMC4-203ENST00000462668 UNQ6190/PRO20217Q6UXQ8 127 aa1.24□□□□□ -2.21
SMC4-203ENST00000462668 IGKV1D-17A0A075B6S4 117 aa1.24□□□□□ -2.21
SMC4-203ENST00000462668 CCL16O15467 120 aa1.24□□□□□ -2.21
SMC4-203ENST00000462668 PP632Q6XCG6 107 aa1.24□□□□□ -2.21
SMC4-203ENST00000462668 SBSPONQ8IVN8 264 aa1.24□□□□□ -2.21
SMC4-203ENST00000462668 IER3IP1Q9Y5U9 82 aa1.24□□□□□ -2.21
SMC4-203ENST00000462668 FAM186AA6NE01 2351 aa1.24□□□□□ -2.21
SMC4-203ENST00000462668 CITO14578 2027 aa1.24□□□□□ -2.21
SMC4-203ENST00000462668 NUMA1Q14980 2115 aa1.24□□□□□ -2.21
SMC4-203ENST00000462668 SSPOA2VEC9 5147 aa1.24□□□□□ -2.21
SMC4-203ENST00000462668 ATP6V1G2-DDX39BF2Z307 99 aa1.23□□□□□ -2.21
SMC4-203ENST00000462668 K7ERU9 68 aa1.23□□□□□ -2.21
SMC4-203ENST00000462668 HYPMO75409 117 aa1.23□□□□□ -2.21
SMC4-203ENST00000462668 Q6ZS92 163 aa1.23□□□□□ -2.21
SMC4-203ENST00000462668 MED9Q9NWA0 146 aa1.23□□□□□ -2.21
SMC4-203ENST00000462668 FN1P02751 2386 aaKnown RBP1.23□□□□□ -2.21
SMC4-203ENST00000462668 TRAV14DV4A0A0A6YYC5 116 aa1.23□□□□□ -2.21
SMC4-203ENST00000462668 SCN3BQ9NY72 215 aa1.23□□□□□ -2.21
SMC4-203ENST00000462668 MUC17Q685J3 4493 aa1.23□□□□□ -2.21
SMC4-203ENST00000462668 A0A0G2JMM0 328 aa1.23□□□□□ -2.21
SMC4-203ENST00000462668 A0A1W2PPB8 328 aa1.23□□□□□ -2.21
SMC4-203ENST00000462668 KIR3DP1A8MWS1 328 aa1.23□□□□□ -2.21
SMC4-203ENST00000462668 Q9Y3F1 56 aa1.23□□□□□ -2.21
SMC4-203ENST00000462668 ADCYAP1P18509 176 aa1.23□□□□□ -2.21
SMC4-203ENST00000462668 C2orf82Q6UX34 121 aa1.23□□□□□ -2.21
SMC4-203ENST00000462668 VSTM2AQ8TAG5 236 aa1.23□□□□□ -2.21
SMC4-203ENST00000462668 MED13LQ71F56 2210 aa1.22□□□□□ -2.21
SMC4-203ENST00000462668 HCRTO43612 131 aa1.22□□□□□ -2.21
SMC4-203ENST00000462668 TCTEX1D1Q8N7M0 179 aa1.22□□□□□ -2.21
SMC4-203ENST00000462668 LSM10Q969L4 123 aaKnown RBP1.22□□□□□ -2.21
SMC4-203ENST00000462668 ODF3Q96PU9 254 aa1.22□□□□□ -2.21
SMC4-203ENST00000462668 C12orf57Q99622 126 aa1.22□□□□□ -2.21
SMC4-203ENST00000462668 CACNA1HO95180 2353 aa1.22□□□□□ -2.21
SMC4-203ENST00000462668 TRBV6-5A0A0K0K1A5 114 aa1.22□□□□□ -2.21
SMC4-203ENST00000462668 TRBV6-4A0A1B0GX49 114 aa1.22□□□□□ -2.21
SMC4-203ENST00000462668 ZNF25P17030 456 aaPredicted RBP1.22□□□□□ -2.21
SMC4-203ENST00000462668 MIC13Q5XKP0 118 aa1.22□□□□□ -2.21
SMC4-203ENST00000462668 FAM25AB3EWG3 89 aa1.21□□□□□ -2.22
SMC4-203ENST00000462668 FAM25CB3EWG5 89 aa1.21□□□□□ -2.22
SMC4-203ENST00000462668 FAM25GB3EWG6 89 aa1.21□□□□□ -2.22
SMC4-203ENST00000462668 COX7CP15954 63 aa1.21□□□□□ -2.22
SMC4-203ENST00000462668 CIRBPQ14011 172 aaKnown RBP1.21□□□□□ -2.22
SMC4-203ENST00000462668 NDUFA11Q86Y39 141 aa1.21□□□□□ -2.22
SMC4-203ENST00000462668 HIVEP3Q5T1R4 2406 aa1.21□□□□□ -2.22
SMC4-203ENST00000462668 NBEAL2Q6ZNJ1 2754 aa1.21□□□□□ -2.22
SMC4-203ENST00000462668 IGHV1-24A0A0C4DH33 117 aa1.21□□□□□ -2.22
SMC4-203ENST00000462668 HIST1H1DP16402 221 aaKnown RBP1.21□□□□□ -2.22
SMC4-203ENST00000462668 BRS3P32247 399 aa1.21□□□□□ -2.22
SMC4-203ENST00000462668 CST9LQ9H4G1 147 aa1.21□□□□□ -2.22
SMC4-203ENST00000462668 COL6A6A6NMZ7 2263 aa1.21□□□□□ -2.22
SMC4-203ENST00000462668 RNF213Q63HN8 5207 aa1.21□□□□□ -2.22
SMC4-203ENST00000462668 IGKV3-7A0A075B6H7 116 aa1.21□□□□□ -2.22
SMC4-203ENST00000462668 MYH9P35579 1960 aaKnown RBP1.21□□□□□ -2.22
SMC4-203ENST00000462668 CHD3Q12873 2000 aaKnown RBP1.2□□□□□ -2.22
SMC4-203ENST00000462668 SMIM6P0DI80 62 aa1.2□□□□□ -2.22
SMC4-203ENST00000462668 Q6AWC8 147 aa1.2□□□□□ -2.22
SMC4-203ENST00000462668 LINC00299Q6ZSB3 139 aa1.2□□□□□ -2.22
SMC4-203ENST00000462668 SLC25A26Q70HW3 274 aa1.2□□□□□ -2.22
SMC4-203ENST00000462668 COA5Q86WW8 74 aa1.2□□□□□ -2.22
SMC4-203ENST00000462668 ANKRD36A6QL64 1941 aa1.2□□□□□ -2.22
SMC4-203ENST00000462668 MEIG1Q5JSS6 88 aa1.2□□□□□ -2.22
SMC4-203ENST00000462668 SERP1Q9Y6X1 66 aa1.2□□□□□ -2.22
SMC4-203ENST00000462668 F6UZH7 168 aa1.2□□□□□ -2.22
SMC4-203ENST00000462668 IGLV3-1P01715 115 aa1.2□□□□□ -2.22
SMC4-203ENST00000462668 CLLU1Q5K131 121 aa1.2□□□□□ -2.22
SMC4-203ENST00000462668 PSMG3Q9BT73 122 aaPredicted RBP1.2□□□□□ -2.22
SMC4-203ENST00000462668 ORMDL1Q9P0S3 153 aa1.2□□□□□ -2.22
SMC4-203ENST00000462668 SPG11Q96JI7 2443 aa1.2□□□□□ -2.22
SMC4-203ENST00000462668 CKS2P33552 79 aa1.2□□□□□ -2.22
SMC4-203ENST00000462668 PCBD1P61457 104 aa1.2□□□□□ -2.22
SMC4-203ENST00000462668 TRBV6-8A0A0A6YYG3 113 aa1.19□□□□□ -2.22
SMC4-203ENST00000462668 C3orf62Q6ZUJ4 267 aa1.19□□□□□ -2.22
SMC4-203ENST00000462668 MED13Q9UHV7 2174 aa1.19□□□□□ -2.22
SMC4-203ENST00000462668 DOPEY1Q5JWR5 2465 aa1.19□□□□□ -2.22
SMC4-203ENST00000462668 COL6A5A8TX70 2615 aa1.19□□□□□ -2.22
SMC4-203ENST00000462668 EXPH5Q8NEV8 1989 aa1.19□□□□□ -2.22
SMC4-203ENST00000462668 CASC2Q6XLA1 102 aa1.19□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms