RNA–Protein interactions for RNA: ENST00000462537.3

CDKN1A-206, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

TSL 3

Gene CDKN1A, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-206ENST00000462537 hDV102S1A0JD36 115 aa12.05□□□□□ -0.48
CDKN1A-206ENST00000462537 PPBPP02775 128 aa12.05□□□□□ -0.48
CDKN1A-206ENST00000462537 SMAGPQ0VAQ4 97 aa12.05□□□□□ -0.48
CDKN1A-206ENST00000462537 MRPL52Q86TS9 123 aaKnown RBP12.05□□□□□ -0.48
CDKN1A-206ENST00000462537 TCAPO15273 167 aa12.04□□□□□ -0.48
CDKN1A-206ENST00000462537 NPYP01303 97 aa12.04□□□□□ -0.48
CDKN1A-206ENST00000462537 RPL32P62910 135 aaKnown RBP12.04□□□□□ -0.48
CDKN1A-206ENST00000462537 Q5VSD8 79 aa12.04□□□□□ -0.48
CDKN1A-206ENST00000462537 Q6ZSA8 131 aa12.04□□□□□ -0.48
CDKN1A-206ENST00000462537 ORMDL3Q8N138 153 aa12.04□□□□□ -0.48
CDKN1A-206ENST00000462537 SMIM2Q9BVW6 85 aa12.04□□□□□ -0.48
CDKN1A-206ENST00000462537 TMEM136Q6ZRR5 245 aa12.03□□□□□ -0.48
CDKN1A-206ENST00000462537 ZNF664Q8N3J9 261 aa12.03□□□□□ -0.48
CDKN1A-206ENST00000462537 TMEM18Q96B42 140 aa12.03□□□□□ -0.48
CDKN1A-206ENST00000462537 PRELID3AQ96N28 172 aa12.03□□□□□ -0.48
CDKN1A-206ENST00000462537 CDC42SE2Q9NRR3 84 aa12.03□□□□□ -0.48
CDKN1A-206ENST00000462537 AP5S1Q9NUS5 200 aa12.03□□□□□ -0.48
CDKN1A-206ENST00000462537 LINC00959A0A1B0GUT2 108 aa12.02□□□□□ -0.49
CDKN1A-206ENST00000462537 PHOX2AO14813 284 aa12.02□□□□□ -0.49
CDKN1A-206ENST00000462537 CFAP161Q6P656 301 aa12.02□□□□□ -0.49
CDKN1A-206ENST00000462537 PCLOQ9Y6V0 5065 aa12.02□□□□□ -0.49
CDKN1A-206ENST00000462537 FAM229AH3BQW9 127 aa12.01□□□□□ -0.49
CDKN1A-206ENST00000462537 XCL1P47992 114 aa12.01□□□□□ -0.49
CDKN1A-206ENST00000462537 SS18Q15532 418 aa12.01□□□□□ -0.49
CDKN1A-206ENST00000462537 SEC11CQ9BY50 192 aa12.01□□□□□ -0.49
CDKN1A-206ENST00000462537 UBE2D4Q9Y2X8 147 aa12.01□□□□□ -0.49
CDKN1A-206ENST00000462537 CCL25O15444 150 aa12□□□□□ -0.49
CDKN1A-206ENST00000462537 C15orf56Q8N910 161 aa12□□□□□ -0.49
CDKN1A-206ENST00000462537 RNASE13Q5GAN3 156 aaKnown RBP11.99□□□□□ -0.49
CDKN1A-206ENST00000462537 C9orf163Q8N9P6 203 aa11.99□□□□□ -0.49
CDKN1A-206ENST00000462537 IMMP2LQ96T52 175 aa11.99□□□□□ -0.49
CDKN1A-206ENST00000462537 CTDSP1Q9GZU7 261 aa11.99□□□□□ -0.49
CDKN1A-206ENST00000462537 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.98□□□□□ -0.49
CDKN1A-206ENST00000462537 RAB5AP20339 215 aa11.98□□□□□ -0.49
CDKN1A-206ENST00000462537 CNBPP62633 177 aaKnown RBP11.98□□□□□ -0.49
CDKN1A-206ENST00000462537 RPL39P62891 51 aaKnown RBP11.98□□□□□ -0.49
CDKN1A-206ENST00000462537 FOXI1Q12951 378 aa11.98□□□□□ -0.49
CDKN1A-206ENST00000462537 HIGD2BQ4VC39 106 aa11.98□□□□□ -0.49
CDKN1A-206ENST00000462537 SCXQ7RTU7 201 aa11.98□□□□□ -0.49
CDKN1A-206ENST00000462537 CSDC2Q9Y534 153 aaKnown RBP11.98□□□□□ -0.49
CDKN1A-206ENST00000462537 ABCA13Q86UQ4 5058 aa11.98□□□□□ -0.49
CDKN1A-206ENST00000462537 LOC389332A0A1B0GUA5 103 aa11.97□□□□□ -0.49
CDKN1A-206ENST00000462537 CHAC1Q9BUX1 264 aa11.97□□□□□ -0.49
CDKN1A-206ENST00000462537 TIMM21Q9BVV7 248 aa11.97□□□□□ -0.49
CDKN1A-206ENST00000462537 LAMTOR2Q9Y2Q5 125 aa11.97□□□□□ -0.49
CDKN1A-206ENST00000462537 Q6ZUT4 128 aa11.96□□□□□ -0.49
CDKN1A-206ENST00000462537 MAP1LC3AQ9H492 121 aa11.96□□□□□ -0.49
CDKN1A-206ENST00000462537 TRAV13-1A0A0B4J241 112 aa11.95□□□□□ -0.5
CDKN1A-206ENST00000462537 S100PP25815 95 aa11.95□□□□□ -0.5
CDKN1A-206ENST00000462537 CD164L2Q6UWJ8 174 aa11.95□□□□□ -0.5
CDKN1A-206ENST00000462537 DNAH8Q96JB1 4490 aa11.94□□□□□ -0.5
CDKN1A-206ENST00000462537 IGHV3-64A0A075B6Q5 118 aa11.94□□□□□ -0.5
CDKN1A-206ENST00000462537 C1orf196B1AJZ1 125 aa11.94□□□□□ -0.5
CDKN1A-206ENST00000462537 SLPIP03973 132 aa11.94□□□□□ -0.5
CDKN1A-206ENST00000462537 LINC00528Q8N1L1 170 aa11.94□□□□□ -0.5
CDKN1A-206ENST00000462537 CIRBP-AS1Q8TBR5 109 aa11.94□□□□□ -0.5
CDKN1A-206ENST00000462537 SPANXA1Q9NS26 97 aa11.94□□□□□ -0.5
CDKN1A-206ENST00000462537 TRAV9-1A0A075B6T8 112 aa11.93□□□□□ -0.5
CDKN1A-206ENST00000462537 INAFM2P0DMQ5 153 aa11.93□□□□□ -0.5
CDKN1A-206ENST00000462537 GVQW2A0A096LPI5 108 aaPredicted RBP11.92□□□□□ -0.5
CDKN1A-206ENST00000462537 IGHV1-58A0A0C4DH39 117 aa11.92□□□□□ -0.5
CDKN1A-206ENST00000462537 SDIM1Q6ZPB5 146 aa11.92□□□□□ -0.5
CDKN1A-206ENST00000462537 PRSS47A8MTI9 375 aa11.91□□□□□ -0.5
CDKN1A-206ENST00000462537 MALP21145 153 aa11.91□□□□□ -0.5
CDKN1A-206ENST00000462537 OPRPNQ99935 248 aaPredicted RBP11.91□□□□□ -0.5
CDKN1A-206ENST00000462537 COX7A2LO14548 114 aa11.9□□□□□ -0.5
CDKN1A-206ENST00000462537 PLA2G1BP04054 148 aaKnown RBP11.9□□□□□ -0.5
CDKN1A-206ENST00000462537 IFI27P40305 119 aaPredicted RBP11.9□□□□□ -0.5
CDKN1A-206ENST00000462537 C10orf91Q5T1B1 145 aa11.9□□□□□ -0.5
CDKN1A-206ENST00000462537 Q8N8P6 123 aa11.9□□□□□ -0.5
CDKN1A-206ENST00000462537 RPS10P5Q9NQ39 176 aa11.9□□□□□ -0.5
CDKN1A-206ENST00000462537 CARHSP1Q9Y2V2 147 aaKnown RBP11.9□□□□□ -0.5
CDKN1A-206ENST00000462537 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.9□□□□□ -0.5
CDKN1A-206ENST00000462537 ZNF561-AS1K7EIQ3 104 aa11.89□□□□□ -0.51
CDKN1A-206ENST00000462537 MRPS36P82909 103 aaKnown RBP11.89□□□□□ -0.51
CDKN1A-206ENST00000462537 RHEBQ15382 184 aa11.89□□□□□ -0.51
CDKN1A-206ENST00000462537 KIAA1644Q3SXP7 199 aa11.89□□□□□ -0.51
CDKN1A-206ENST00000462537 LINC00526Q96FQ7 95 aa11.89□□□□□ -0.51
CDKN1A-206ENST00000462537 DPH3Q96FX2 82 aa11.89□□□□□ -0.51
CDKN1A-206ENST00000462537 FAT1Q14517 4588 aa11.87□□□□□ -0.51
CDKN1A-206ENST00000462537 IFITM10A6NMD0 228 aa11.87□□□□□ -0.51
CDKN1A-206ENST00000462537 PANO1I0J062 215 aa11.87□□□□□ -0.51
CDKN1A-206ENST00000462537 ORMDL2Q53FV1 153 aa11.87□□□□□ -0.51
CDKN1A-206ENST00000462537 C5orf38Q86SI9 138 aa11.87□□□□□ -0.51
CDKN1A-206ENST00000462537 FAM104AQ969W3 186 aa11.87□□□□□ -0.51
CDKN1A-206ENST00000462537 NXT2Q9NPJ8 142 aaKnown RBP11.87□□□□□ -0.51
CDKN1A-206ENST00000462537 GNB1LQ9BYB4 327 aa11.86□□□□□ -0.51
CDKN1A-206ENST00000462537 CYSLTR1Q9Y271 337 aa11.86□□□□□ -0.51
CDKN1A-206ENST00000462537 VPS13BQ7Z7G8 4022 aa11.85□□□□□ -0.51
CDKN1A-206ENST00000462537 CHTF8P0CG12 524 aa11.85□□□□□ -0.51
CDKN1A-206ENST00000462537 COX6A2Q02221 97 aa11.85□□□□□ -0.51
CDKN1A-206ENST00000462537 C2orf66Q6UXQ4 117 aa11.85□□□□□ -0.51
CDKN1A-206ENST00000462537 PYGO1Q9Y3Y4 419 aa11.85□□□□□ -0.51
CDKN1A-206ENST00000462537 APOMO95445 188 aa11.84□□□□□ -0.51
CDKN1A-206ENST00000462537 APOC3P02656 99 aa11.84□□□□□ -0.51
CDKN1A-206ENST00000462537 COX19Q49B96 90 aa11.84□□□□□ -0.51
CDKN1A-206ENST00000462537 TMEM141Q96I45 108 aa11.84□□□□□ -0.51
CDKN1A-206ENST00000462537 CARD19Q96LW7 228 aa11.84□□□□□ -0.51
CDKN1A-206ENST00000462537 SRRM2Q9UQ35 2752 aaKnown RBP11.83□□□□□ -0.52
CDKN1A-206ENST00000462537 IGLV4-3A0A075B6K6 122 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms