RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 FHL3Q13643 280 aa12.19□□□□□ -0.46
ACTB-207ENST00000462494 ATP6V0E2Q8NHE4 81 aa12.19□□□□□ -0.46
ACTB-207ENST00000462494 SPATA25Q9BR10 227 aa12.19□□□□□ -0.46
ACTB-207ENST00000462494 FLNAP21333 2647 aaKnown RBP12.19□□□□□ -0.46
ACTB-207ENST00000462494 CLUHP3Q96NS8 147 aa12.18□□□□□ -0.46
ACTB-207ENST00000462494 CDKN2A-AS1Q9UH64 79 aa12.18□□□□□ -0.46
ACTB-207ENST00000462494 Q6ZTI0 123 aa12.18□□□□□ -0.46
ACTB-207ENST00000462494 NOTCH3Q9UM47 2321 aa12.18□□□□□ -0.46
ACTB-207ENST00000462494 TEX29Q8N6K0 151 aa12.17□□□□□ -0.46
ACTB-207ENST00000462494 NIPBLQ6KC79 2804 aaeCLIP12.16□□□□□ -0.46
ACTB-207ENST00000462494 TEN1Q86WV5 123 aa12.16□□□□□ -0.46
ACTB-207ENST00000462494 IL17DQ8TAD2 202 aa12.15□□□□□ -0.46
ACTB-207ENST00000462494 C9JAW5 83 aa12.15□□□□□ -0.46
ACTB-207ENST00000462494 LINC00694P0DN24 101 aa12.15□□□□□ -0.46
ACTB-207ENST00000462494 COX6A2Q02221 97 aa12.15□□□□□ -0.46
ACTB-207ENST00000462494 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.15□□□□□ -0.46
ACTB-207ENST00000462494 K7EQD1 137 aa12.14□□□□□ -0.47
ACTB-207ENST00000462494 RPL36AP83881 106 aaKnown RBP12.14□□□□□ -0.47
ACTB-207ENST00000462494 MIAQ16674 131 aa12.14□□□□□ -0.47
ACTB-207ENST00000462494 ZFAND6Q6FIF0 208 aa12.14□□□□□ -0.47
ACTB-207ENST00000462494 PPDPFLQ8WWR9 84 aa12.14□□□□□ -0.47
ACTB-207ENST00000462494 RPL36ALQ969Q0 106 aaKnown RBP12.14□□□□□ -0.47
ACTB-207ENST00000462494 CARD19Q96LW7 228 aa12.14□□□□□ -0.47
ACTB-207ENST00000462494 SPANXDQ9BXN6 97 aa12.14□□□□□ -0.47
ACTB-207ENST00000462494 NOP10Q9NPE3 64 aaKnown RBP12.14□□□□□ -0.47
ACTB-207ENST00000462494 SPANXCQ9NY87 97 aa12.14□□□□□ -0.47
ACTB-207ENST00000462494 NDUFA7O95182 113 aa12.14□□□□□ -0.47
ACTB-207ENST00000462494 ANKRD29Q8N6D5 301 aa12.14□□□□□ -0.47
ACTB-207ENST00000462494 DAND5Q8N907 189 aa12.14□□□□□ -0.47
ACTB-207ENST00000462494 WFDC10AQ9H1F0 79 aa12.14□□□□□ -0.47
ACTB-207ENST00000462494 GAGE12JA6NER3 117 aa12.13□□□□□ -0.47
ACTB-207ENST00000462494 SLC25A20O43772 301 aa12.13□□□□□ -0.47
ACTB-207ENST00000462494 GAGE4Q13068 117 aa12.13□□□□□ -0.47
ACTB-207ENST00000462494 GAGE5Q13069 117 aa12.13□□□□□ -0.47
ACTB-207ENST00000462494 SBSPONQ8IVN8 264 aa12.13□□□□□ -0.47
ACTB-207ENST00000462494 TMEM101Q96IK0 257 aa12.13□□□□□ -0.47
ACTB-207ENST00000462494 TIRAPP58753 221 aa12.13□□□□□ -0.47
ACTB-207ENST00000462494 RPL35AP18077 110 aaKnown RBP12.12□□□□□ -0.47
ACTB-207ENST00000462494 LINC01006Q8NI28 216 aa12.12□□□□□ -0.47
ACTB-207ENST00000462494 YAE1D1Q9NRH1 226 aa12.12□□□□□ -0.47
ACTB-207ENST00000462494 JMJD1CQ15652 2540 aa12.12□□□□□ -0.47
ACTB-207ENST00000462494 TRAV13-1A0A0B4J241 112 aa12.11□□□□□ -0.47
ACTB-207ENST00000462494 TRIAP1O43715 76 aa12.11□□□□□ -0.47
ACTB-207ENST00000462494 TRAV4A0A0B4J268 109 aa12.11□□□□□ -0.47
ACTB-207ENST00000462494 ATXN8Q156A1 80 aa12.11□□□□□ -0.47
ACTB-207ENST00000462494 LINC00242Q5T6M2 205 aa12.11□□□□□ -0.47
ACTB-207ENST00000462494 NTM-AS1Q6ZSK4 140 aa12.11□□□□□ -0.47
ACTB-207ENST00000462494 IGLV5-45A0A087WSX0 123 aa12.1□□□□□ -0.47
ACTB-207ENST00000462494 HERVK_113P63121 156 aa12.1□□□□□ -0.47
ACTB-207ENST00000462494 DAZ2Q13117 558 aaKnown RBP12.1□□□□□ -0.47
ACTB-207ENST00000462494 DAZ4Q86SG3 579 aaKnown RBP12.1□□□□□ -0.47
ACTB-207ENST00000462494 DAZ3Q9NR90 486 aaKnown RBP12.1□□□□□ -0.47
ACTB-207ENST00000462494 SETXQ7Z333 2677 aaKnown RBP12.1□□□□□ -0.47
ACTB-207ENST00000462494 TRBV10-1A0A0K0K1A3 114 aa12.1□□□□□ -0.47
ACTB-207ENST00000462494 ZNF625Q96I27 306 aaPredicted RBP12.1□□□□□ -0.47
ACTB-207ENST00000462494 ACANP16112 2415 aa12.09□□□□□ -0.47
ACTB-207ENST00000462494 NDUFA1O15239 70 aa12.09□□□□□ -0.47
ACTB-207ENST00000462494 CDIP1Q9H305 208 aa12.09□□□□□ -0.47
ACTB-207ENST00000462494 TENM4Q6N022 2769 aa12.09□□□□□ -0.47
ACTB-207ENST00000462494 TRGV2A0A075B6R0 118 aa12.09□□□□□ -0.47
ACTB-207ENST00000462494 TRBV30A0A0K0K1B3 111 aa12.09□□□□□ -0.47
ACTB-207ENST00000462494 A0A0U1RRA0 63 aa12.09□□□□□ -0.47
ACTB-207ENST00000462494 GAGE7O76087 117 aa12.09□□□□□ -0.47
ACTB-207ENST00000462494 GIG44P09565 113 aaPredicted RBP12.09□□□□□ -0.47
ACTB-207ENST00000462494 GAGE12FP0CL80 117 aa12.09□□□□□ -0.47
ACTB-207ENST00000462494 GAGE12GP0CL81 117 aa12.09□□□□□ -0.47
ACTB-207ENST00000462494 GAGE12IP0CL82 117 aa12.09□□□□□ -0.47
ACTB-207ENST00000462494 SCGB1A1P11684 91 aa12.09□□□□□ -0.47
ACTB-207ENST00000462494 Q9H8V8 135 aa12.09□□□□□ -0.47
ACTB-207ENST00000462494 ICOSQ9Y6W8 199 aa12.09□□□□□ -0.47
ACTB-207ENST00000462494 C2CD3Q4AC94 2353 aa12.07□□□□□ -0.48
ACTB-207ENST00000462494 CIRBPQ14011 172 aaKnown RBP12.07□□□□□ -0.48
ACTB-207ENST00000462494 LINC01620Q4KN68 170 aa12.07□□□□□ -0.48
ACTB-207ENST00000462494 MTORP42345 2549 aa12.06□□□□□ -0.48
ACTB-207ENST00000462494 UBE2L6O14933 153 aa12.06□□□□□ -0.48
ACTB-207ENST00000462494 TIMM17BO60830 172 aa12.06□□□□□ -0.48
ACTB-207ENST00000462494 LOC100131303A0A0U1RQF7 123 aa12.06□□□□□ -0.48
ACTB-207ENST00000462494 KRTAP1-1Q07627 177 aa12.06□□□□□ -0.48
ACTB-207ENST00000462494 C16orf74Q96GX8 76 aa12.06□□□□□ -0.48
ACTB-207ENST00000462494 RNASE1P07998 156 aaKnown RBP12.05□□□□□ -0.48
ACTB-207ENST00000462494 PLA2G2AP14555 144 aa12.05□□□□□ -0.48
ACTB-207ENST00000462494 CMC4P56277 68 aaPredicted RBP12.05□□□□□ -0.48
ACTB-207ENST00000462494 CDC42SE2Q9NRR3 84 aa12.05□□□□□ -0.48
ACTB-207ENST00000462494 IGLV5-39A0A0G2JS06 123 aa12.05□□□□□ -0.48
ACTB-207ENST00000462494 SMIM1B2RUZ4 78 aa12.05□□□□□ -0.48
ACTB-207ENST00000462494 IFITM1P13164 125 aa12.05□□□□□ -0.48
ACTB-207ENST00000462494 RPL13AP40429 203 aaKnown RBP12.05□□□□□ -0.48
ACTB-207ENST00000462494 CSDC2Q9Y534 153 aaKnown RBP12.05□□□□□ -0.48
ACTB-207ENST00000462494 PLAC8L1A1L4L8 177 aa12.04□□□□□ -0.48
ACTB-207ENST00000462494 COX6CP09669 75 aa12.04□□□□□ -0.48
ACTB-207ENST00000462494 C16orf95Q9H693 158 aa12.04□□□□□ -0.48
ACTB-207ENST00000462494 IGLV1-51P01701 117 aa12.03□□□□□ -0.48
ACTB-207ENST00000462494 NTN5Q8WTR8 489 aaPredicted RBP12.03□□□□□ -0.48
ACTB-207ENST00000462494 TMEM243Q9BU79 118 aa12.03□□□□□ -0.48
ACTB-207ENST00000462494 MT-ATP8P03928 68 aa12.03□□□□□ -0.48
ACTB-207ENST00000462494 CLEC2BQ92478 149 aa12.03□□□□□ -0.48
ACTB-207ENST00000462494 TRGV4A0A0C4DH28 118 aa12.02□□□□□ -0.48
ACTB-207ENST00000462494 C19orf73Q9NVV2 129 aa12.02□□□□□ -0.48
ACTB-207ENST00000462494 PDZD2O15018 2839 aa12.02□□□□□ -0.49
ACTB-207ENST00000462494 M0QXV9 152 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms