RNA–Protein interactions for RNA: ENST00000462335.1

PKP4-208, Transcript of plakophilin 4, humanhuman

TSL 4

Gene PKP4, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-208ENST00000462335 PRR34Q9NV39 138 aa6.37□□□□□ -1.39
PKP4-208ENST00000462335 LRCOL1A6NCL2 159 aa6.36□□□□□ -1.39
PKP4-208ENST00000462335 ESDP10768 282 aa6.36□□□□□ -1.39
PKP4-208ENST00000462335 KRTAP10-2P60368 255 aa6.36□□□□□ -1.39
PKP4-208ENST00000462335 KIAA1644Q3SXP7 199 aa6.36□□□□□ -1.39
PKP4-208ENST00000462335 ORMDL2Q53FV1 153 aa6.36□□□□□ -1.39
PKP4-208ENST00000462335 NXT2Q9NPJ8 142 aaKnown RBP6.36□□□□□ -1.39
PKP4-208ENST00000462335 SMCO4Q9NRQ5 59 aa6.36□□□□□ -1.39
PKP4-208ENST00000462335 FRAS1Q86XX4 4008 aa6.35□□□□□ -1.39
PKP4-208ENST00000462335 GAGE12HA6NDE8 117 aa6.35□□□□□ -1.39
PKP4-208ENST00000462335 USP17L23D6RBM5 183 aa6.35□□□□□ -1.39
PKP4-208ENST00000462335 FUSP35637 526 aaKnown RBP eCLIP6.35□□□□□ -1.39
PKP4-208ENST00000462335 IFI27P40305 119 aaPredicted RBP6.35□□□□□ -1.39
PKP4-208ENST00000462335 Q8N8P6 123 aa6.35□□□□□ -1.39
PKP4-208ENST00000462335 MRPL18Q9H0U6 180 aaKnown RBP6.35□□□□□ -1.39
PKP4-208ENST00000462335 TRAPPC1Q9Y5R8 145 aa6.35□□□□□ -1.39
PKP4-208ENST00000462335 hDV102S1A0JD36 115 aa6.34□□□□□ -1.39
PKP4-208ENST00000462335 C1orf196B1AJZ1 125 aa6.34□□□□□ -1.39
PKP4-208ENST00000462335 K7EMI3 77 aa6.34□□□□□ -1.39
PKP4-208ENST00000462335 MALP21145 153 aa6.34□□□□□ -1.39
PKP4-208ENST00000462335 XCL1P47992 114 aa6.34□□□□□ -1.39
PKP4-208ENST00000462335 Q6ZN92 141 aa6.34□□□□□ -1.39
PKP4-208ENST00000462335 FA2HQ7L5A8 372 aa6.34□□□□□ -1.39
PKP4-208ENST00000462335 MRPL52Q86TS9 123 aaKnown RBP6.34□□□□□ -1.39
PKP4-208ENST00000462335 SLC7A5P1Q8MH63 180 aa6.34□□□□□ -1.39
PKP4-208ENST00000462335 CHCHD10Q8WYQ3 142 aaPredicted RBP6.34□□□□□ -1.39
PKP4-208ENST00000462335 TIMM21Q9BVV7 248 aa6.34□□□□□ -1.39
PKP4-208ENST00000462335 CDC42SE2Q9NRR3 84 aa6.34□□□□□ -1.39
PKP4-208ENST00000462335 SPANXA1Q9NS26 97 aa6.34□□□□□ -1.39
PKP4-208ENST00000462335 CYSLTR1Q9Y271 337 aa6.34□□□□□ -1.39
PKP4-208ENST00000462335 DNAH2Q9P225 4427 aa6.34□□□□□ -1.4
PKP4-208ENST00000462335 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.33□□□□□ -1.4
PKP4-208ENST00000462335 TRAV13-1A0A0B4J241 112 aa6.33□□□□□ -1.4
PKP4-208ENST00000462335 LINC00959A0A1B0GUT2 108 aa6.33□□□□□ -1.4
PKP4-208ENST00000462335 CCL25O15444 150 aa6.33□□□□□ -1.4
PKP4-208ENST00000462335 DPH3Q96FX2 82 aa6.33□□□□□ -1.4
PKP4-208ENST00000462335 C2orf88Q9BSF0 95 aa6.33□□□□□ -1.4
PKP4-208ENST00000462335 UBE2D4Q9Y2X8 147 aa6.33□□□□□ -1.4
PKP4-208ENST00000462335 CSDC2Q9Y534 153 aaKnown RBP6.33□□□□□ -1.4
PKP4-208ENST00000462335 TGIF2-C20orf24A0A0A6YYL0 155 aa6.32□□□□□ -1.4
PKP4-208ENST00000462335 RPL39P62891 51 aaKnown RBP6.32□□□□□ -1.4
PKP4-208ENST00000462335 RNASE13Q5GAN3 156 aaKnown RBP6.32□□□□□ -1.4
PKP4-208ENST00000462335 PAPPA-AS1Q5QFB9 102 aa6.32□□□□□ -1.4
PKP4-208ENST00000462335 MAPKAPK5-AS1Q8N8E1 139 aa6.32□□□□□ -1.4
PKP4-208ENST00000462335 IFITM10A6NMD0 228 aa6.31□□□□□ -1.4
PKP4-208ENST00000462335 PRSS47A8MTI9 375 aa6.31□□□□□ -1.4
PKP4-208ENST00000462335 WFDC2Q14508 124 aa6.31□□□□□ -1.4
PKP4-208ENST00000462335 VCX2Q9H322 139 aa6.31□□□□□ -1.4
PKP4-208ENST00000462335 DNAH17Q9UFH2 4485 aa6.31□□□□□ -1.4
PKP4-208ENST00000462335 EPPK1P58107 5090 aaKnown RBP6.3□□□□□ -1.4
PKP4-208ENST00000462335 LINC01549A6NIU2 74 aa6.3□□□□□ -1.4
PKP4-208ENST00000462335 ZNF561-AS1K7EIQ3 104 aa6.3□□□□□ -1.4
PKP4-208ENST00000462335 COX7A2LO14548 114 aa6.3□□□□□ -1.4
PKP4-208ENST00000462335 APOMO95445 188 aa6.3□□□□□ -1.4
PKP4-208ENST00000462335 RAB5BP61020 215 aa6.3□□□□□ -1.4
PKP4-208ENST00000462335 CD164L2Q6UWJ8 174 aa6.3□□□□□ -1.4
PKP4-208ENST00000462335 C2orf66Q6UXQ4 117 aa6.3□□□□□ -1.4
PKP4-208ENST00000462335 TEX43Q6ZNM6 134 aa6.3□□□□□ -1.4
PKP4-208ENST00000462335 Q6ZUT4 128 aa6.3□□□□□ -1.4
PKP4-208ENST00000462335 TMEM141Q96I45 108 aa6.3□□□□□ -1.4
PKP4-208ENST00000462335 ALKBH7Q9BT30 221 aaPredicted RBP6.3□□□□□ -1.4
PKP4-208ENST00000462335 IGHV1-58A0A0C4DH39 117 aa6.29□□□□□ -1.4
PKP4-208ENST00000462335 CDK2AP2O75956 126 aa6.29□□□□□ -1.4
PKP4-208ENST00000462335 MRPS36P82909 103 aaKnown RBP6.29□□□□□ -1.4
PKP4-208ENST00000462335 C4orf48Q5BLP8 95 aa6.29□□□□□ -1.4
PKP4-208ENST00000462335 SCGB3A1Q96QR1 104 aa6.29□□□□□ -1.4
PKP4-208ENST00000462335 PYGO1Q9Y3Y4 419 aa6.29□□□□□ -1.4
PKP4-208ENST00000462335 FAT2Q9NYQ8 4349 aa6.28□□□□□ -1.4
PKP4-208ENST00000462335 PRSS1P07477 247 aa6.28□□□□□ -1.4
PKP4-208ENST00000462335 KRTAP10-1P60331 282 aa6.28□□□□□ -1.4
PKP4-208ENST00000462335 HIGD2BQ4VC39 106 aa6.28□□□□□ -1.4
PKP4-208ENST00000462335 OPRPNQ99935 248 aaPredicted RBP6.28□□□□□ -1.4
PKP4-208ENST00000462335 IGHV3-64A0A075B6Q5 118 aa6.27□□□□□ -1.41
PKP4-208ENST00000462335 FOXI1Q12951 378 aa6.27□□□□□ -1.41
PKP4-208ENST00000462335 C5orf38Q86SI9 138 aa6.27□□□□□ -1.41
PKP4-208ENST00000462335 CBLN2Q8IUK8 224 aa6.27□□□□□ -1.41
PKP4-208ENST00000462335 PKIGQ9Y2B9 76 aa6.27□□□□□ -1.41
PKP4-208ENST00000462335 HECTD4Q9Y4D8 3996 aa6.27□□□□□ -1.41
PKP4-208ENST00000462335 NPSP0C0P6 89 aa6.26□□□□□ -1.41
PKP4-208ENST00000462335 LINC00614P0C842 121 aa6.26□□□□□ -1.41
PKP4-208ENST00000462335 NDUFA6P56556 154 aa6.26□□□□□ -1.41
PKP4-208ENST00000462335 SEC11AP67812 179 aa6.26□□□□□ -1.41
PKP4-208ENST00000462335 LINC01620Q4KN68 170 aa6.26□□□□□ -1.41
PKP4-208ENST00000462335 KRTAP26-1Q6PEX3 210 aa6.26□□□□□ -1.41
PKP4-208ENST00000462335 GEMIN7Q9H840 131 aaKnown RBP6.26□□□□□ -1.41
PKP4-208ENST00000462335 PKD1P98161 4303 aa6.26□□□□□ -1.41
PKP4-208ENST00000462335 IGLV4-3A0A075B6K6 122 aa6.25□□□□□ -1.41
PKP4-208ENST00000462335 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.25□□□□□ -1.41
PKP4-208ENST00000462335 FAM229AH3BQW9 127 aa6.25□□□□□ -1.41
PKP4-208ENST00000462335 ERASQ7Z444 233 aa6.25□□□□□ -1.41
PKP4-208ENST00000462335 BAGE3Q86Y29 109 aa6.25□□□□□ -1.41
PKP4-208ENST00000462335 TOMM6Q96B49 74 aa6.25□□□□□ -1.41
PKP4-208ENST00000462335 PRSS2P07478 247 aa6.24□□□□□ -1.41
PKP4-208ENST00000462335 C9orf163Q8N9P6 203 aa6.24□□□□□ -1.41
PKP4-208ENST00000462335 PACRGQ96M98 296 aaPredicted RBP6.24□□□□□ -1.41
PKP4-208ENST00000462335 TIMM17AQ99595 171 aa6.24□□□□□ -1.41
PKP4-208ENST00000462335 BIRC6Q9NR09 4857 aa6.23□□□□□ -1.41
PKP4-208ENST00000462335 GVQW2A0A096LPI5 108 aaPredicted RBP6.23□□□□□ -1.41
PKP4-208ENST00000462335 CNBPP62633 177 aaKnown RBP6.23□□□□□ -1.41
PKP4-208ENST00000462335 SYCNQ0VAF6 134 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms