RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 TMEM101Q96IK0 257 aa10.36□□□□□ -0.75
ERCC3-206ENST00000462306 TRAV9-1A0A075B6T8 112 aa10.35□□□□□ -0.75
ERCC3-206ENST00000462306 XGP55808 180 aa10.35□□□□□ -0.75
ERCC3-206ENST00000462306 CLRN3Q8NCR9 226 aa10.35□□□□□ -0.75
ERCC3-206ENST00000462306 CDC42SE2Q9NRR3 84 aa10.35□□□□□ -0.75
ERCC3-206ENST00000462306 PRSS47A8MTI9 375 aa10.34□□□□□ -0.75
ERCC3-206ENST00000462306 TCAPO15273 167 aa10.34□□□□□ -0.75
ERCC3-206ENST00000462306 PRSS1P07477 247 aa10.34□□□□□ -0.75
ERCC3-206ENST00000462306 LAMTOR2Q9Y2Q5 125 aa10.34□□□□□ -0.75
ERCC3-206ENST00000462306 UBE2D4Q9Y2X8 147 aa10.34□□□□□ -0.75
ERCC3-206ENST00000462306 CSDC2Q9Y534 153 aaKnown RBP10.34□□□□□ -0.75
ERCC3-206ENST00000462306 GAGE12HA6NDE8 117 aa10.33□□□□□ -0.76
ERCC3-206ENST00000462306 RHEBQ15382 184 aa10.33□□□□□ -0.76
ERCC3-206ENST00000462306 ZNF664Q8N3J9 261 aa10.33□□□□□ -0.76
ERCC3-206ENST00000462306 CHCHD10Q8WYQ3 142 aaPredicted RBP10.33□□□□□ -0.76
ERCC3-206ENST00000462306 LINC00959A0A1B0GUT2 108 aa10.32□□□□□ -0.76
ERCC3-206ENST00000462306 LINC01620Q4KN68 170 aa10.32□□□□□ -0.76
ERCC3-206ENST00000462306 TIMM21Q9BVV7 248 aa10.32□□□□□ -0.76
ERCC3-206ENST00000462306 FAM30AQ9NZY2 134 aa10.32□□□□□ -0.76
ERCC3-206ENST00000462306 DNAH8Q96JB1 4490 aa10.31□□□□□ -0.76
ERCC3-206ENST00000462306 S100PP25815 95 aa10.31□□□□□ -0.76
ERCC3-206ENST00000462306 RPL39P62891 51 aaKnown RBP10.31□□□□□ -0.76
ERCC3-206ENST00000462306 SMAGPQ0VAQ4 97 aa10.31□□□□□ -0.76
ERCC3-206ENST00000462306 DGAT2L7PQ6IED9 249 aa10.31□□□□□ -0.76
ERCC3-206ENST00000462306 TMEM18Q96B42 140 aa10.31□□□□□ -0.76
ERCC3-206ENST00000462306 RPS10P5Q9NQ39 176 aa10.31□□□□□ -0.76
ERCC3-206ENST00000462306 FAM104AQ969W3 186 aa10.3□□□□□ -0.76
ERCC3-206ENST00000462306 KRTAP4-5Q9BYR2 181 aa10.3□□□□□ -0.76
ERCC3-206ENST00000462306 MAP1LC3AQ9H492 121 aa10.3□□□□□ -0.76
ERCC3-206ENST00000462306 LOC389332A0A1B0GUA5 103 aa10.29□□□□□ -0.76
ERCC3-206ENST00000462306 APOC3P02656 99 aa10.29□□□□□ -0.76
ERCC3-206ENST00000462306 FOXI1Q12951 378 aa10.29□□□□□ -0.76
ERCC3-206ENST00000462306 Q6ZSA8 131 aa10.29□□□□□ -0.76
ERCC3-206ENST00000462306 Q8N1X5 172 aa10.29□□□□□ -0.76
ERCC3-206ENST00000462306 CCL25O15444 150 aa10.28□□□□□ -0.76
ERCC3-206ENST00000462306 RAB5AP20339 215 aa10.28□□□□□ -0.76
ERCC3-206ENST00000462306 XCL1P47992 114 aa10.28□□□□□ -0.76
ERCC3-206ENST00000462306 KIAA1644Q3SXP7 199 aa10.28□□□□□ -0.76
ERCC3-206ENST00000462306 RNASE13Q5GAN3 156 aaKnown RBP10.28□□□□□ -0.76
ERCC3-206ENST00000462306 Q6ZUT4 128 aa10.28□□□□□ -0.76
ERCC3-206ENST00000462306 Q8N8P6 123 aa10.28□□□□□ -0.76
ERCC3-206ENST00000462306 C15orf56Q8N910 161 aa10.28□□□□□ -0.76
ERCC3-206ENST00000462306 GNB1LQ9BYB4 327 aa10.28□□□□□ -0.76
ERCC3-206ENST00000462306 hDV102S1A0JD36 115 aa10.27□□□□□ -0.77
ERCC3-206ENST00000462306 HAMPP81172 84 aa10.27□□□□□ -0.77
ERCC3-206ENST00000462306 SS18Q15532 418 aa10.27□□□□□ -0.77
ERCC3-206ENST00000462306 SPANXA1Q9NS26 97 aa10.27□□□□□ -0.77
ERCC3-206ENST00000462306 PCLOQ9Y6V0 5065 aa10.26□□□□□ -0.77
ERCC3-206ENST00000462306 SLPIP03973 132 aa10.26□□□□□ -0.77
ERCC3-206ENST00000462306 CNBPP62633 177 aaKnown RBP10.26□□□□□ -0.77
ERCC3-206ENST00000462306 SVBPQ8N300 66 aa10.26□□□□□ -0.77
ERCC3-206ENST00000462306 C9orf163Q8N9P6 203 aa10.26□□□□□ -0.77
ERCC3-206ENST00000462306 OPRPNQ99935 248 aaPredicted RBP10.26□□□□□ -0.77
ERCC3-206ENST00000462306 C1orf196B1AJZ1 125 aa10.25□□□□□ -0.77
ERCC3-206ENST00000462306 SNAPINO95295 136 aa10.25□□□□□ -0.77
ERCC3-206ENST00000462306 MRPS36P82909 103 aaKnown RBP10.25□□□□□ -0.77
ERCC3-206ENST00000462306 NDUFA5Q16718 116 aa10.25□□□□□ -0.77
ERCC3-206ENST00000462306 COX19Q49B96 90 aa10.25□□□□□ -0.77
ERCC3-206ENST00000462306 CFAP161Q6P656 301 aa10.25□□□□□ -0.77
ERCC3-206ENST00000462306 CD164L2Q6UWJ8 174 aa10.25□□□□□ -0.77
ERCC3-206ENST00000462306 TRAV13-1A0A0B4J241 112 aa10.24□□□□□ -0.77
ERCC3-206ENST00000462306 NXT2Q9NPJ8 142 aaKnown RBP10.24□□□□□ -0.77
ERCC3-206ENST00000462306 PYGO1Q9Y3Y4 419 aa10.24□□□□□ -0.77
ERCC3-206ENST00000462306 ABCA13Q86UQ4 5058 aa10.23□□□□□ -0.77
ERCC3-206ENST00000462306 GVQW2A0A096LPI5 108 aaPredicted RBP10.23□□□□□ -0.77
ERCC3-206ENST00000462306 K7EMI3 77 aa10.23□□□□□ -0.77
ERCC3-206ENST00000462306 MT-ND6P03923 174 aa10.23□□□□□ -0.77
ERCC3-206ENST00000462306 IFI27P40305 119 aaPredicted RBP10.23□□□□□ -0.77
ERCC3-206ENST00000462306 AP5S1Q9NUS5 200 aa10.23□□□□□ -0.77
ERCC3-206ENST00000462306 TGIF2-C20orf24A0A0A6YYL0 155 aa10.22□□□□□ -0.77
ERCC3-206ENST00000462306 SMR3BP02814 79 aaPredicted RBP10.22□□□□□ -0.77
ERCC3-206ENST00000462306 HIGD2BQ4VC39 106 aa10.22□□□□□ -0.77
ERCC3-206ENST00000462306 ORMDL2Q53FV1 153 aa10.22□□□□□ -0.77
ERCC3-206ENST00000462306 ALKBH7Q9BT30 221 aaPredicted RBP10.22□□□□□ -0.77
ERCC3-206ENST00000462306 MRPL18Q9H0U6 180 aaKnown RBP10.22□□□□□ -0.77
ERCC3-206ENST00000462306 C2orf66Q6UXQ4 117 aa10.21□□□□□ -0.77
ERCC3-206ENST00000462306 SDIM1Q6ZPB5 146 aa10.21□□□□□ -0.77
ERCC3-206ENST00000462306 CYSLTR1Q9Y271 337 aa10.21□□□□□ -0.77
ERCC3-206ENST00000462306 FAT1Q14517 4588 aa10.2□□□□□ -0.78
ERCC3-206ENST00000462306 IGLV4-3A0A075B6K6 122 aa10.2□□□□□ -0.78
ERCC3-206ENST00000462306 IGHV1-58A0A0C4DH39 117 aa10.2□□□□□ -0.78
ERCC3-206ENST00000462306 FABP9Q0Z7S8 132 aa10.2□□□□□ -0.78
ERCC3-206ENST00000462306 SCXQ7RTU7 201 aa10.2□□□□□ -0.78
ERCC3-206ENST00000462306 CHAC1Q9BUX1 264 aa10.2□□□□□ -0.78
ERCC3-206ENST00000462306 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.19□□□□□ -0.78
ERCC3-206ENST00000462306 IFITM10A6NMD0 228 aa10.18□□□□□ -0.78
ERCC3-206ENST00000462306 EPM2AB3EWF7 344 aa10.18□□□□□ -0.78
ERCC3-206ENST00000462306 COX7A2LO14548 114 aa10.18□□□□□ -0.78
ERCC3-206ENST00000462306 SLC7A5P1Q8MH63 180 aa10.18□□□□□ -0.78
ERCC3-206ENST00000462306 TMEM141Q96I45 108 aa10.18□□□□□ -0.78
ERCC3-206ENST00000462306 YPEL4Q96NS1 127 aa10.18□□□□□ -0.78
ERCC3-206ENST00000462306 LINC01546A6NGU7 62 aa10.17□□□□□ -0.78
ERCC3-206ENST00000462306 IGIPA6NJ69 53 aa10.17□□□□□ -0.78
ERCC3-206ENST00000462306 C5orf38Q86SI9 138 aa10.17□□□□□ -0.78
ERCC3-206ENST00000462306 PRSS3P2Q8NHM4 247 aa10.17□□□□□ -0.78
ERCC3-206ENST00000462306 CIRBP-AS1Q8TBR5 109 aa10.17□□□□□ -0.78
ERCC3-206ENST00000462306 LINC00526Q96FQ7 95 aa10.17□□□□□ -0.78
ERCC3-206ENST00000462306 IGHV3-64A0A075B6Q5 118 aa10.16□□□□□ -0.78
ERCC3-206ENST00000462306 IGHV3OR16-9A0A0B4J2B5 98 aa10.16□□□□□ -0.78
ERCC3-206ENST00000462306 PANO1I0J062 215 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms