RNA–Protein interactions for RNA: ENST00000461377.5

CCM2-203, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-203ENST00000461377 FHL2Q14192 279 aa14.34□□□□□ -0.11
CCM2-203ENST00000461377 LINC00612Q8N6U2 182 aa14.34□□□□□ -0.11
CCM2-203ENST00000461377 KIR2DL5BQ8NHK3 375 aa14.34□□□□□ -0.11
CCM2-203ENST00000461377 LINC00694P0DN24 101 aa14.33□□□□□ -0.12
CCM2-203ENST00000461377 UBE2D1P51668 147 aa14.33□□□□□ -0.12
CCM2-203ENST00000461377 C12orf74Q32Q52 190 aa14.33□□□□□ -0.12
CCM2-203ENST00000461377 GTSF1LQ9H1H1 148 aa14.33□□□□□ -0.12
CCM2-203ENST00000461377 SPANXB1Q9NS25 103 aaPredicted RBP14.33□□□□□ -0.12
CCM2-203ENST00000461377 A0A1B0GWB2 263 aa14.33□□□□□ -0.12
CCM2-203ENST00000461377 DGAT2L7PQ6IED9 249 aa14.33□□□□□ -0.12
CCM2-203ENST00000461377 CSDC2Q9Y534 153 aaKnown RBP14.33□□□□□ -0.12
CCM2-203ENST00000461377 IGHV3-64A0A075B6Q5 118 aa14.32□□□□□ -0.12
CCM2-203ENST00000461377 LOC100131303A0A0U1RQF7 123 aa14.32□□□□□ -0.12
CCM2-203ENST00000461377 A0A1W2PPM0 123 aa14.32□□□□□ -0.12
CCM2-203ENST00000461377 SMIM9A6NGZ8 99 aa14.32□□□□□ -0.12
CCM2-203ENST00000461377 SRSF9Q13242 221 aaKnown RBP eCLIP14.31□□□□□ -0.12
CCM2-203ENST00000461377 WFDC9Q8NEX5 89 aa14.31□□□□□ -0.12
CCM2-203ENST00000461377 GAGE10A6NGK3 116 aa14.3□□□□□ -0.12
CCM2-203ENST00000461377 IGHV3-30-3P0DP02 117 aa14.3□□□□□ -0.12
CCM2-203ENST00000461377 SAMD5Q5TGI4 173 aa14.3□□□□□ -0.12
CCM2-203ENST00000461377 K7EP34 96 aa14.29□□□□□ -0.12
CCM2-203ENST00000461377 NOTCH3Q9UM47 2321 aa14.29□□□□□ -0.12
CCM2-203ENST00000461377 IGHV1-58A0A0C4DH39 117 aa14.29□□□□□ -0.12
CCM2-203ENST00000461377 TIRAPP58753 221 aa14.29□□□□□ -0.12
CCM2-203ENST00000461377 SMAGPQ0VAQ4 97 aa14.29□□□□□ -0.12
CCM2-203ENST00000461377 VWFP04275 2813 aa14.28□□□□□ -0.12
CCM2-203ENST00000461377 IGLV5-45A0A087WSX0 123 aa14.28□□□□□ -0.12
CCM2-203ENST00000461377 GTF2H5Q6ZYL4 71 aa14.28□□□□□ -0.12
CCM2-203ENST00000461377 TMEM243Q9BU79 118 aa14.28□□□□□ -0.12
CCM2-203ENST00000461377 GEMIN7Q9H840 131 aaKnown RBP14.28□□□□□ -0.12
CCM2-203ENST00000461377 TRAV8-3A0A0A6YYJ7 113 aa14.27□□□□□ -0.12
CCM2-203ENST00000461377 TMEM238LA0A1B0GVL6 79 aa14.27□□□□□ -0.12
CCM2-203ENST00000461377 A6NJY4 79 aa14.27□□□□□ -0.12
CCM2-203ENST00000461377 IGLL5B9A064 214 aa14.27□□□□□ -0.12
CCM2-203ENST00000461377 DEFB130BP0DP73 79 aa14.27□□□□□ -0.12
CCM2-203ENST00000461377 DEFB130AP0DP74 79 aa14.27□□□□□ -0.12
CCM2-203ENST00000461377 TENM1Q9UKZ4 2725 aa14.27□□□□□ -0.12
CCM2-203ENST00000461377 WIPF1O43516 503 aa14.27□□□□□ -0.13
CCM2-203ENST00000461377 IGHV3-30P01768 117 aa14.27□□□□□ -0.13
CCM2-203ENST00000461377 IGHV3-30-5P0DP03 117 aa14.27□□□□□ -0.13
CCM2-203ENST00000461377 FABP2P12104 132 aa14.27□□□□□ -0.13
CCM2-203ENST00000461377 FAM19A3Q7Z5A8 133 aa14.27□□□□□ -0.13
CCM2-203ENST00000461377 VSIG2Q96IQ7 327 aa14.27□□□□□ -0.13
CCM2-203ENST00000461377 APOC4P55056 127 aa14.26□□□□□ -0.13
CCM2-203ENST00000461377 C10orf126Q8N4M7 172 aa14.26□□□□□ -0.13
CCM2-203ENST00000461377 CDC42SE2Q9NRR3 84 aa14.25□□□□□ -0.13
CCM2-203ENST00000461377 SPCS1Q9Y6A9 102 aa14.25□□□□□ -0.13
CCM2-203ENST00000461377 H7C423 109 aa14.25□□□□□ -0.13
CCM2-203ENST00000461377 SPINK8P0C7L1 97 aa14.25□□□□□ -0.13
CCM2-203ENST00000461377 CBY1Q9Y3M2 126 aa14.25□□□□□ -0.13
CCM2-203ENST00000461377 CDKN2A-AS1Q9UH64 79 aa14.24□□□□□ -0.13
CCM2-203ENST00000461377 UBE2L6O14933 153 aa14.23□□□□□ -0.13
CCM2-203ENST00000461377 HERVK_113P63121 156 aa14.23□□□□□ -0.13
CCM2-203ENST00000461377 LINC00242Q5T6M2 205 aa14.23□□□□□ -0.13
CCM2-203ENST00000461377 A0A0J9YXY3 114 aa14.23□□□□□ -0.13
CCM2-203ENST00000461377 COX6A2Q02221 97 aa14.23□□□□□ -0.13
CCM2-203ENST00000461377 DEFB135Q30KP9 77 aa14.23□□□□□ -0.13
CCM2-203ENST00000461377 LYRM9A8MSI8 78 aa14.22□□□□□ -0.13
CCM2-203ENST00000461377 TMEM101Q96IK0 257 aa14.22□□□□□ -0.13
CCM2-203ENST00000461377 FAM222AQ5U5X8 452 aa14.21□□□□□ -0.13
CCM2-203ENST00000461377 NDUFA12Q9UI09 145 aa14.21□□□□□ -0.13
CCM2-203ENST00000461377 TRBV6-8A0A0A6YYG3 113 aa14.2□□□□□ -0.14
CCM2-203ENST00000461377 TMEM238C9JI98 176 aa14.2□□□□□ -0.14
CCM2-203ENST00000461377 ZFAND6Q6FIF0 208 aa14.2□□□□□ -0.14
CCM2-203ENST00000461377 TEP1Q99973 2627 aaKnown RBP14.19□□□□□ -0.14
CCM2-203ENST00000461377 A8MZ25 164 aa14.19□□□□□ -0.14
CCM2-203ENST00000461377 TRAV13-1A0A0B4J241 112 aa14.18□□□□□ -0.14
CCM2-203ENST00000461377 LITAFQ99732 161 aa14.18□□□□□ -0.14
CCM2-203ENST00000461377 ATRQ13535 2644 aa14.18□□□□□ -0.14
CCM2-203ENST00000461377 IGHV4-28A0A0C4DH34 117 aa14.18□□□□□ -0.14
CCM2-203ENST00000461377 IGLV5-39A0A0G2JS06 123 aa14.18□□□□□ -0.14
CCM2-203ENST00000461377 GYPEP15421 78 aa14.17□□□□□ -0.14
CCM2-203ENST00000461377 GAGE6Q13070 117 aa14.17□□□□□ -0.14
CCM2-203ENST00000461377 PGPEP1Q9NXJ5 209 aa14.17□□□□□ -0.14
CCM2-203ENST00000461377 PRO0255Q9UI72 69 aa14.17□□□□□ -0.14
CCM2-203ENST00000461377 APOMO95445 188 aa14.16□□□□□ -0.14
CCM2-203ENST00000461377 CFC1BP0CG36 223 aa14.16□□□□□ -0.14
CCM2-203ENST00000461377 CFC1P0CG37 223 aa14.16□□□□□ -0.14
CCM2-203ENST00000461377 IGHV4-30-4P0DP06 118 aa14.16□□□□□ -0.14
CCM2-203ENST00000461377 KRTAP24-1Q3LI83 254 aa14.15□□□□□ -0.14
CCM2-203ENST00000461377 ATP6V0E2Q8NHE4 81 aa14.15□□□□□ -0.14
CCM2-203ENST00000461377 F8P00451 2351 aa14.15□□□□□ -0.14
CCM2-203ENST00000461377 MUSTN1Q8IVN3 82 aa14.14□□□□□ -0.15
CCM2-203ENST00000461377 Q8NAQ8 132 aa14.14□□□□□ -0.15
CCM2-203ENST00000461377 SMIM1B2RUZ4 78 aa14.14□□□□□ -0.15
CCM2-203ENST00000461377 NDUFA1O15239 70 aa14.14□□□□□ -0.15
CCM2-203ENST00000461377 DEFB4AO15263 64 aa14.14□□□□□ -0.15
CCM2-203ENST00000461377 MIFP14174 115 aa14.14□□□□□ -0.15
CCM2-203ENST00000461377 CHCHD5Q9BSY4 110 aa14.14□□□□□ -0.15
CCM2-203ENST00000461377 A4D1N5 150 aa14.13□□□□□ -0.15
CCM2-203ENST00000461377 TSPAN13O95857 204 aa14.13□□□□□ -0.15
CCM2-203ENST00000461377 RPL24P83731 157 aaKnown RBP14.13□□□□□ -0.15
CCM2-203ENST00000461377 SPANXDQ9BXN6 97 aa14.13□□□□□ -0.15
CCM2-203ENST00000461377 SPANXCQ9NY87 97 aa14.13□□□□□ -0.15
CCM2-203ENST00000461377 F5H768 121 aa14.13□□□□□ -0.15
CCM2-203ENST00000461377 RNF183Q96D59 192 aa14.13□□□□□ -0.15
CCM2-203ENST00000461377 IGLV4-60A0A075B6I1 120 aa14.12□□□□□ -0.15
CCM2-203ENST00000461377 TIMM17BO60830 172 aa14.11□□□□□ -0.15
CCM2-203ENST00000461377 ADAMTSL4-AS1Q5T5F5 129 aa14.11□□□□□ -0.15
CCM2-203ENST00000461377 PAX4O43316 350 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms