RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 Q5VSD8 79 aa9.79□□□□□ -0.84
ATG4B-213ENST00000460211 KRTAP26-1Q6PEX3 210 aa9.79□□□□□ -0.84
ATG4B-213ENST00000460211 COMMD7Q86VX2 200 aa9.79□□□□□ -0.84
ATG4B-213ENST00000460211 ORMDL3Q8N138 153 aa9.79□□□□□ -0.84
ATG4B-213ENST00000460211 CLRN3Q8NCR9 226 aa9.79□□□□□ -0.84
ATG4B-213ENST00000460211 VPS13BQ7Z7G8 4022 aa9.79□□□□□ -0.84
ATG4B-213ENST00000460211 XGP55808 180 aa9.78□□□□□ -0.84
ATG4B-213ENST00000460211 TMEM136Q6ZRR5 245 aa9.78□□□□□ -0.84
ATG4B-213ENST00000460211 MRPL52Q86TS9 123 aaKnown RBP9.78□□□□□ -0.84
ATG4B-213ENST00000460211 IMMP2LQ96T52 175 aa9.78□□□□□ -0.84
ATG4B-213ENST00000460211 SEC11CQ9BY50 192 aa9.78□□□□□ -0.84
ATG4B-213ENST00000460211 CTDSP1Q9GZU7 261 aa9.78□□□□□ -0.84
ATG4B-213ENST00000460211 CFAP161Q6P656 301 aa9.77□□□□□ -0.85
ATG4B-213ENST00000460211 MYCBP2O75592 4640 aa9.76□□□□□ -0.85
ATG4B-213ENST00000460211 GAGE12HA6NDE8 117 aa9.76□□□□□ -0.85
ATG4B-213ENST00000460211 ADCYAP1P18509 176 aa9.76□□□□□ -0.85
ATG4B-213ENST00000460211 PRELID3AQ96N28 172 aa9.76□□□□□ -0.85
ATG4B-213ENST00000460211 SMIM2Q9BVW6 85 aa9.76□□□□□ -0.85
ATG4B-213ENST00000460211 NPYP01303 97 aa9.75□□□□□ -0.85
ATG4B-213ENST00000460211 SMR3BP02814 79 aaPredicted RBP9.75□□□□□ -0.85
ATG4B-213ENST00000460211 PRSS1P07477 247 aa9.75□□□□□ -0.85
ATG4B-213ENST00000460211 SS18Q15532 418 aa9.75□□□□□ -0.85
ATG4B-213ENST00000460211 ZNF664Q8N3J9 261 aa9.75□□□□□ -0.85
ATG4B-213ENST00000460211 CHCHD10Q8WYQ3 142 aaPredicted RBP9.75□□□□□ -0.85
ATG4B-213ENST00000460211 CDC42SE2Q9NRR3 84 aa9.75□□□□□ -0.85
ATG4B-213ENST00000460211 AP5S1Q9NUS5 200 aa9.75□□□□□ -0.85
ATG4B-213ENST00000460211 LAMTOR2Q9Y2Q5 125 aa9.75□□□□□ -0.85
ATG4B-213ENST00000460211 CSDC2Q9Y534 153 aaKnown RBP9.75□□□□□ -0.85
ATG4B-213ENST00000460211 hDV102S1A0JD36 115 aa9.74□□□□□ -0.85
ATG4B-213ENST00000460211 RAB5AP20339 215 aa9.74□□□□□ -0.85
ATG4B-213ENST00000460211 S100PP25815 95 aa9.74□□□□□ -0.85
ATG4B-213ENST00000460211 FLG2Q5D862 2391 aaPredicted RBP9.73□□□□□ -0.85
ATG4B-213ENST00000460211 TRAV9-1A0A075B6T8 112 aa9.73□□□□□ -0.85
ATG4B-213ENST00000460211 LINC00959A0A1B0GUT2 108 aa9.73□□□□□ -0.85
ATG4B-213ENST00000460211 TIMM21Q9BVV7 248 aa9.73□□□□□ -0.85
ATG4B-213ENST00000460211 SRRM2Q9UQ35 2752 aaKnown RBP9.72□□□□□ -0.85
ATG4B-213ENST00000460211 HAMPP81172 84 aa9.72□□□□□ -0.85
ATG4B-213ENST00000460211 LINC01620Q4KN68 170 aa9.72□□□□□ -0.85
ATG4B-213ENST00000460211 MAP1LC3AQ9H492 121 aa9.72□□□□□ -0.85
ATG4B-213ENST00000460211 FAM30AQ9NZY2 134 aa9.72□□□□□ -0.85
ATG4B-213ENST00000460211 UBE2D4Q9Y2X8 147 aa9.72□□□□□ -0.85
ATG4B-213ENST00000460211 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.71□□□□□ -0.86
ATG4B-213ENST00000460211 CCL25O15444 150 aa9.71□□□□□ -0.86
ATG4B-213ENST00000460211 XCL1P47992 114 aa9.71□□□□□ -0.86
ATG4B-213ENST00000460211 Q6ZSA8 131 aa9.71□□□□□ -0.86
ATG4B-213ENST00000460211 C1orf196B1AJZ1 125 aa9.7□□□□□ -0.86
ATG4B-213ENST00000460211 FAM229AH3BQW9 127 aa9.7□□□□□ -0.86
ATG4B-213ENST00000460211 C9orf163Q8N9P6 203 aa9.7□□□□□ -0.86
ATG4B-213ENST00000460211 SPANXA1Q9NS26 97 aa9.7□□□□□ -0.86
ATG4B-213ENST00000460211 LOC389332A0A1B0GUA5 103 aa9.69□□□□□ -0.86
ATG4B-213ENST00000460211 PRSS47A8MTI9 375 aa9.69□□□□□ -0.86
ATG4B-213ENST00000460211 CNBPP62633 177 aaKnown RBP9.69□□□□□ -0.86
ATG4B-213ENST00000460211 RHEBQ15382 184 aa9.69□□□□□ -0.86
ATG4B-213ENST00000460211 C10orf91Q5T1B1 145 aa9.69□□□□□ -0.86
ATG4B-213ENST00000460211 CD164L2Q6UWJ8 174 aa9.69□□□□□ -0.86
ATG4B-213ENST00000460211 CARHSP1Q9Y2V2 147 aaKnown RBP9.69□□□□□ -0.86
ATG4B-213ENST00000460211 FOXI1Q12951 378 aa9.68□□□□□ -0.86
ATG4B-213ENST00000460211 TRAV13-1A0A0B4J241 112 aa9.67□□□□□ -0.86
ATG4B-213ENST00000460211 RPL39P62891 51 aaKnown RBP9.67□□□□□ -0.86
ATG4B-213ENST00000460211 NDUFA5Q16718 116 aa9.67□□□□□ -0.86
ATG4B-213ENST00000460211 COX19Q49B96 90 aa9.67□□□□□ -0.86
ATG4B-213ENST00000460211 Q8N8P6 123 aa9.67□□□□□ -0.86
ATG4B-213ENST00000460211 C15orf56Q8N910 161 aa9.67□□□□□ -0.86
ATG4B-213ENST00000460211 CHAC1Q9BUX1 264 aa9.67□□□□□ -0.86
ATG4B-213ENST00000460211 RPS10P5Q9NQ39 176 aa9.67□□□□□ -0.86
ATG4B-213ENST00000460211 IGHV3-64A0A075B6Q5 118 aa9.66□□□□□ -0.86
ATG4B-213ENST00000460211 IGHV1-58A0A0C4DH39 117 aa9.66□□□□□ -0.86
ATG4B-213ENST00000460211 K7EMI3 77 aa9.66□□□□□ -0.86
ATG4B-213ENST00000460211 IFI27P40305 119 aaPredicted RBP9.66□□□□□ -0.86
ATG4B-213ENST00000460211 HIGD2BQ4VC39 106 aa9.66□□□□□ -0.86
ATG4B-213ENST00000460211 RNASE13Q5GAN3 156 aaKnown RBP9.66□□□□□ -0.86
ATG4B-213ENST00000460211 Q6ZUT4 128 aa9.66□□□□□ -0.86
ATG4B-213ENST00000460211 NXT2Q9NPJ8 142 aaKnown RBP9.66□□□□□ -0.86
ATG4B-213ENST00000460211 GVQW2A0A096LPI5 108 aaPredicted RBP9.65□□□□□ -0.86
ATG4B-213ENST00000460211 J3QL48 77 aa9.65□□□□□ -0.86
ATG4B-213ENST00000460211 MALP21145 153 aa9.65□□□□□ -0.86
ATG4B-213ENST00000460211 G0S2P27469 103 aa9.65□□□□□ -0.86
ATG4B-213ENST00000460211 MRPS36P82909 103 aaKnown RBP9.65□□□□□ -0.86
ATG4B-213ENST00000460211 ORMDL2Q53FV1 153 aa9.65□□□□□ -0.86
ATG4B-213ENST00000460211 COX7A2LO14548 114 aa9.64□□□□□ -0.87
ATG4B-213ENST00000460211 SDIM1Q6ZPB5 146 aa9.64□□□□□ -0.87
ATG4B-213ENST00000460211 SCXQ7RTU7 201 aa9.64□□□□□ -0.87
ATG4B-213ENST00000460211 GNB1LQ9BYB4 327 aa9.64□□□□□ -0.87
ATG4B-213ENST00000460211 PYGO1Q9Y3Y4 419 aa9.64□□□□□ -0.87
ATG4B-213ENST00000460211 ZNF561-AS1K7EIQ3 104 aa9.63□□□□□ -0.87
ATG4B-213ENST00000460211 APOC3P02656 99 aa9.63□□□□□ -0.87
ATG4B-213ENST00000460211 KIAA1644Q3SXP7 199 aa9.63□□□□□ -0.87
ATG4B-213ENST00000460211 CYSLTR1Q9Y271 337 aa9.63□□□□□ -0.87
ATG4B-213ENST00000460211 IFITM10A6NMD0 228 aa9.62□□□□□ -0.87
ATG4B-213ENST00000460211 SNAPINO95295 136 aa9.62□□□□□ -0.87
ATG4B-213ENST00000460211 APOMO95445 188 aa9.62□□□□□ -0.87
ATG4B-213ENST00000460211 MT-ND6P03923 174 aa9.62□□□□□ -0.87
ATG4B-213ENST00000460211 SLPIP03973 132 aa9.62□□□□□ -0.87
ATG4B-213ENST00000460211 PLA2G1BP04054 148 aaKnown RBP9.62□□□□□ -0.87
ATG4B-213ENST00000460211 SVBPQ8N300 66 aa9.62□□□□□ -0.87
ATG4B-213ENST00000460211 CIRBP-AS1Q8TBR5 109 aa9.62□□□□□ -0.87
ATG4B-213ENST00000460211 DPH3Q96FX2 82 aa9.62□□□□□ -0.87
ATG4B-213ENST00000460211 C2orf66Q6UXQ4 117 aa9.61□□□□□ -0.87
ATG4B-213ENST00000460211 Q6ZN92 141 aa9.61□□□□□ -0.87
ATG4B-213ENST00000460211 PRSS3P2Q8NHM4 247 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms