RNA–Protein interactions for RNA: ENST00000460158.1

VPS8-215, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 366 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-215ENST00000460158 ZNF56Q15929 161 aa1.81□□□□□ -2.12
VPS8-215ENST00000460158 FAM223AQ8IWN6 122 aa1.81□□□□□ -2.12
VPS8-215ENST00000460158 TVP23CQ96ET8 276 aa1.81□□□□□ -2.12
VPS8-215ENST00000460158 LINC01600Q96MT4 127 aa1.81□□□□□ -2.12
VPS8-215ENST00000460158 CUL9Q8IWT3 2517 aa1.81□□□□□ -2.12
VPS8-215ENST00000460158 LMTK2Q8IWU2 1503 aa1.81□□□□□ -2.12
VPS8-215ENST00000460158 PLXNC1O60486 1568 aa1.81□□□□□ -2.12
VPS8-215ENST00000460158 ADAMTS7Q9UKP4 1686 aa1.8□□□□□ -2.12
VPS8-215ENST00000460158 NUP188Q5SRE5 1749 aa1.8□□□□□ -2.12
VPS8-215ENST00000460158 CRYBG1Q9Y4K1 1723 aa1.8□□□□□ -2.12
VPS8-215ENST00000460158 COL14A1Q05707 1796 aaKnown RBP1.8□□□□□ -2.12
VPS8-215ENST00000460158 TSC2P49815 1807 aa1.8□□□□□ -2.12
VPS8-215ENST00000460158 UBR3Q6ZT12 1888 aa1.8□□□□□ -2.12
VPS8-215ENST00000460158 HIGD1CA8MV81 97 aa1.8□□□□□ -2.12
VPS8-215ENST00000460158 TMEM14DPA8MWL7 114 aa1.8□□□□□ -2.12
VPS8-215ENST00000460158 HMGN2P05204 90 aaKnown RBP1.8□□□□□ -2.12
VPS8-215ENST00000460158 SSBP1Q04837 148 aaKnown RBP1.8□□□□□ -2.12
VPS8-215ENST00000460158 PSMG4Q5JS54 123 aa1.8□□□□□ -2.12
VPS8-215ENST00000460158 Q5VV11 94 aa1.8□□□□□ -2.12
VPS8-215ENST00000460158 PATE1Q8WXA2 126 aa1.8□□□□□ -2.12
VPS8-215ENST00000460158 MED13Q9UHV7 2174 aa1.8□□□□□ -2.12
VPS8-215ENST00000460158 BRWD1Q9NSI6 2320 aa1.8□□□□□ -2.12
VPS8-215ENST00000460158 HMGXB3Q12766 1538 aa1.8□□□□□ -2.12
VPS8-215ENST00000460158 ZFHX2Q9C0A1 2572 aaPredicted RBP1.8□□□□□ -2.12
VPS8-215ENST00000460158 GPR179Q6PRD1 2367 aa1.79□□□□□ -2.12
VPS8-215ENST00000460158 TRBV6-7A0A0A0MS04 114 aa1.79□□□□□ -2.12
VPS8-215ENST00000460158 A0A0G2JQZ4 141 aa1.79□□□□□ -2.12
VPS8-215ENST00000460158 A0A0J9YY99 117 aa1.79□□□□□ -2.12
VPS8-215ENST00000460158 F8WEM9 126 aa1.79□□□□□ -2.12
VPS8-215ENST00000460158 DNAL4O96015 105 aa1.79□□□□□ -2.12
VPS8-215ENST00000460158 PPYP01298 95 aa1.79□□□□□ -2.12
VPS8-215ENST00000460158 KRTAP13-2Q52LG2 175 aa1.79□□□□□ -2.12
VPS8-215ENST00000460158 C20orf197Q8N268 126 aa1.79□□□□□ -2.12
VPS8-215ENST00000460158 BPESC1Q9GZL8 116 aa1.79□□□□□ -2.12
VPS8-215ENST00000460158 NDUFA4L2Q9NRX3 87 aa1.79□□□□□ -2.12
VPS8-215ENST00000460158 LENEPQ9Y5L5 61 aa1.79□□□□□ -2.12
VPS8-215ENST00000460158 V9GYH0 126 aa1.79□□□□□ -2.12
VPS8-215ENST00000460158 CTTNBP2Q8WZ74 1663 aa1.79□□□□□ -2.12
VPS8-215ENST00000460158 ARFGEF3Q5TH69 2177 aa1.78□□□□□ -2.12
VPS8-215ENST00000460158 ADGRB2O60241 1585 aa1.78□□□□□ -2.12
VPS8-215ENST00000460158 ARHGEF5Q12774 1597 aa1.78□□□□□ -2.12
VPS8-215ENST00000460158 NEXMIFQ5QGS0 1516 aa1.78□□□□□ -2.12
VPS8-215ENST00000460158 EHBP1L1Q8N3D4 1523 aa1.78□□□□□ -2.12
VPS8-215ENST00000460158 IGKV3-7A0A075B6H7 116 aa1.78□□□□□ -2.12
VPS8-215ENST00000460158 TRBV6-4A0A1B0GX49 114 aa1.78□□□□□ -2.12
VPS8-215ENST00000460158 JMJD7-PLA2G4BH0Y9G9 81 aa1.78□□□□□ -2.12
VPS8-215ENST00000460158 HMGN4O00479 90 aa1.78□□□□□ -2.12
VPS8-215ENST00000460158 PPP1R17O96001 155 aa1.78□□□□□ -2.12
VPS8-215ENST00000460158 SFTA3P0C7M3 94 aa1.78□□□□□ -2.12
VPS8-215ENST00000460158 SPAG11BQ08648 103 aa1.78□□□□□ -2.12
VPS8-215ENST00000460158 SPAG11AQ6PDA7 123 aa1.78□□□□□ -2.12
VPS8-215ENST00000460158 C6orf201Q7Z4U5 140 aa1.78□□□□□ -2.12
VPS8-215ENST00000460158 CDC42SE2Q9NRR3 84 aa1.78□□□□□ -2.12
VPS8-215ENST00000460158 SPAG17Q6Q759 2223 aa1.78□□□□□ -2.13
VPS8-215ENST00000460158 TIAM2Q8IVF5 1701 aa1.77□□□□□ -2.13
VPS8-215ENST00000460158 KIF1AQ12756 1690 aa1.77□□□□□ -2.13
VPS8-215ENST00000460158 SHPRHQ149N8 1683 aa1.77□□□□□ -2.13
VPS8-215ENST00000460158 PIK3C2BO00750 1634 aa1.77□□□□□ -2.13
VPS8-215ENST00000460158 RNF17Q9BXT8 1623 aaKnown RBP1.77□□□□□ -2.13
VPS8-215ENST00000460158 PRRC2BQ5JSZ5 2229 aaKnown RBP1.77□□□□□ -2.13
VPS8-215ENST00000460158 FREM1Q5H8C1 2179 aa1.77□□□□□ -2.13
VPS8-215ENST00000460158 ALPK2Q86TB3 2170 aa1.77□□□□□ -2.13
VPS8-215ENST00000460158 MYMXA0A1B0GTQ4 84 aa1.77□□□□□ -2.13
VPS8-215ENST00000460158 A0A1B0GWA3 101 aa1.77□□□□□ -2.13
VPS8-215ENST00000460158 IQCF6A8MYZ5 107 aa1.77□□□□□ -2.13
VPS8-215ENST00000460158 IGLV6-57P01721 117 aa1.77□□□□□ -2.13
VPS8-215ENST00000460158 IGHV3-30P01768 117 aa1.77□□□□□ -2.13
VPS8-215ENST00000460158 SAA2P0DJI9 122 aaPredicted RBP1.77□□□□□ -2.13
VPS8-215ENST00000460158 IGHV3-30-5P0DP03 117 aa1.77□□□□□ -2.13
VPS8-215ENST00000460158 PLGLAQ15195 96 aa1.77□□□□□ -2.13
VPS8-215ENST00000460158 FAM74A4Q5TZK3 123 aa1.77□□□□□ -2.13
VPS8-215ENST00000460158 XAF1Q6GPH4 301 aa1.77□□□□□ -2.13
VPS8-215ENST00000460158 SMIM5Q71RC9 77 aa1.77□□□□□ -2.13
VPS8-215ENST00000460158 TMEM14BQ9NUH8 114 aa1.77□□□□□ -2.13
VPS8-215ENST00000460158 KLK9Q9UKQ9 250 aa1.77□□□□□ -2.13
VPS8-215ENST00000460158 ARL2-SNX15V9GYD0 113 aa1.77□□□□□ -2.13
VPS8-215ENST00000460158 MROH2AA6NES4 1674 aa1.77□□□□□ -2.13
VPS8-215ENST00000460158 WIZO95785 1651 aa1.77□□□□□ -2.13
VPS8-215ENST00000460158 ITSN2Q9NZM3 1697 aa1.77□□□□□ -2.13
VPS8-215ENST00000460158 ASXL1Q8IXJ9 1541 aa1.76□□□□□ -2.13
VPS8-215ENST00000460158 CEBPZOSA8MTT3 80 aa1.76□□□□□ -2.13
VPS8-215ENST00000460158 LEPROTL1O95214 131 aa1.76□□□□□ -2.13
VPS8-215ENST00000460158 IGKV1-17P01599 117 aa1.76□□□□□ -2.13
VPS8-215ENST00000460158 IGLV3-19P01714 112 aa1.76□□□□□ -2.13
VPS8-215ENST00000460158 WFDC10AQ9H1F0 79 aa1.76□□□□□ -2.13
VPS8-215ENST00000460158 RTTNQ86VV8 2226 aa1.75□□□□□ -2.13
VPS8-215ENST00000460158 BCORQ6W2J9 1755 aa1.75□□□□□ -2.13
VPS8-215ENST00000460158 PARP4Q9UKK3 1724 aaKnown RBP1.75□□□□□ -2.13
VPS8-215ENST00000460158 CROCC2H7BZ55 1655 aa1.75□□□□□ -2.13
VPS8-215ENST00000460158 C5P01031 1676 aa1.75□□□□□ -2.13
VPS8-215ENST00000460158 LOC101927531A0A1B0GV80 90 aa1.75□□□□□ -2.13
VPS8-215ENST00000460158 PDE6GP18545 87 aa1.75□□□□□ -2.13
VPS8-215ENST00000460158 C10orf55Q5SWW7 151 aa1.75□□□□□ -2.13
VPS8-215ENST00000460158 Q86TA4 180 aa1.75□□□□□ -2.13
VPS8-215ENST00000460158 COX7B2Q8TF08 81 aa1.75□□□□□ -2.13
VPS8-215ENST00000460158 PPP1R1CQ8WVI7 109 aa1.75□□□□□ -2.13
VPS8-215ENST00000460158 AMELXQ99217 191 aa1.75□□□□□ -2.13
VPS8-215ENST00000460158 R4GMQ9 66 aa1.75□□□□□ -2.13
VPS8-215ENST00000460158 MRC1P22897 1456 aa1.75□□□□□ -2.13
VPS8-215ENST00000460158 FANCD2Q9BXW9 1451 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms