RNA–Protein interactions for RNA: ENST00000453960.6

MECP2-205, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene MECP2, Length 1,729 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-205ENST00000453960 SMR3AQ99954 134 aa12.97□□□□□ -0.33
MECP2-205ENST00000453960 WFDC10AQ9H1F0 79 aa12.97□□□□□ -0.33
MECP2-205ENST00000453960 LY6G6DO95868 133 aa12.96□□□□□ -0.33
MECP2-205ENST00000453960 RPL36AP83881 106 aaKnown RBP12.96□□□□□ -0.33
MECP2-205ENST00000453960 RPL36ALQ969Q0 106 aaKnown RBP12.96□□□□□ -0.33
MECP2-205ENST00000453960 JMJD1CQ15652 2540 aa12.95□□□□□ -0.34
MECP2-205ENST00000453960 K7ERU9 68 aa12.95□□□□□ -0.34
MECP2-205ENST00000453960 VSIG2Q96IQ7 327 aa12.95□□□□□ -0.34
MECP2-205ENST00000453960 NOP10Q9NPE3 64 aaKnown RBP12.95□□□□□ -0.34
MECP2-205ENST00000453960 A0A0J9YXY3 114 aa12.94□□□□□ -0.34
MECP2-205ENST00000453960 NTM-AS1Q6ZSK4 140 aa12.94□□□□□ -0.34
MECP2-205ENST00000453960 LITAFQ99732 161 aa12.94□□□□□ -0.34
MECP2-205ENST00000453960 GTSF1LQ9H1H1 148 aa12.94□□□□□ -0.34
MECP2-205ENST00000453960 PGPEP1Q9NXJ5 209 aa12.94□□□□□ -0.34
MECP2-205ENST00000453960 CFC1BP0CG36 223 aa12.93□□□□□ -0.34
MECP2-205ENST00000453960 CFC1P0CG37 223 aa12.93□□□□□ -0.34
MECP2-205ENST00000453960 TRBV6-4A0A1B0GX49 114 aa12.93□□□□□ -0.34
MECP2-205ENST00000453960 F8W1H4 67 aa12.93□□□□□ -0.34
MECP2-205ENST00000453960 TSPAN13O95857 204 aa12.93□□□□□ -0.34
MECP2-205ENST00000453960 RPL35AP18077 110 aaKnown RBP12.93□□□□□ -0.34
MECP2-205ENST00000453960 RNASE13Q5GAN3 156 aaKnown RBP12.93□□□□□ -0.34
MECP2-205ENST00000453960 TMEM238C9JI98 176 aa12.92□□□□□ -0.34
MECP2-205ENST00000453960 PRO0461Q9UI25 63 aa12.92□□□□□ -0.34
MECP2-205ENST00000453960 TRAV8-3A0A0A6YYJ7 113 aa12.91□□□□□ -0.34
MECP2-205ENST00000453960 ZFAND6Q6FIF0 208 aa12.91□□□□□ -0.34
MECP2-205ENST00000453960 LINC00612Q8N6U2 182 aa12.91□□□□□ -0.34
MECP2-205ENST00000453960 IGHV3-64A0A075B6Q5 118 aa12.9□□□□□ -0.34
MECP2-205ENST00000453960 A0A0B4J2C4 111 aa12.9□□□□□ -0.34
MECP2-205ENST00000453960 LINC00694P0DN24 101 aa12.9□□□□□ -0.34
MECP2-205ENST00000453960 SMAGPQ0VAQ4 97 aa12.9□□□□□ -0.34
MECP2-205ENST00000453960 SPANXDQ9BXN6 97 aa12.9□□□□□ -0.34
MECP2-205ENST00000453960 SPANXCQ9NY87 97 aa12.9□□□□□ -0.34
MECP2-205ENST00000453960 NOTCH3Q9UM47 2321 aa12.89□□□□□ -0.35
MECP2-205ENST00000453960 IGLV5-39A0A0G2JS06 123 aa12.89□□□□□ -0.35
MECP2-205ENST00000453960 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.89□□□□□ -0.35
MECP2-205ENST00000453960 G3V4G9 280 aa12.88□□□□□ -0.35
MECP2-205ENST00000453960 H7C423 109 aa12.88□□□□□ -0.35
MECP2-205ENST00000453960 EIF4EBP3O60516 100 aaPredicted RBP12.88□□□□□ -0.35
MECP2-205ENST00000453960 TIMM17BO60830 172 aa12.88□□□□□ -0.35
MECP2-205ENST00000453960 INSL3P51460 131 aa12.88□□□□□ -0.35
MECP2-205ENST00000453960 RPL24P83731 157 aaKnown RBP12.88□□□□□ -0.35
MECP2-205ENST00000453960 GEMIN7Q9H840 131 aaKnown RBP12.88□□□□□ -0.35
MECP2-205ENST00000453960 A4D1N5 150 aa12.88□□□□□ -0.35
MECP2-205ENST00000453960 APOMO95445 188 aa12.88□□□□□ -0.35
MECP2-205ENST00000453960 HERVK_113P63121 156 aa12.88□□□□□ -0.35
MECP2-205ENST00000453960 LINC00242Q5T6M2 205 aa12.88□□□□□ -0.35
MECP2-205ENST00000453960 DGAT2L7PQ6IED9 249 aa12.88□□□□□ -0.35
MECP2-205ENST00000453960 KIR2DL5BQ8NHK3 375 aa12.88□□□□□ -0.35
MECP2-205ENST00000453960 RNF183Q96D59 192 aa12.88□□□□□ -0.35
MECP2-205ENST00000453960 CDC42SE2Q9NRR3 84 aa12.88□□□□□ -0.35
MECP2-205ENST00000453960 CDKN2A-AS1Q9UH64 79 aa12.88□□□□□ -0.35
MECP2-205ENST00000453960 PRO1854Q9UHT4 67 aa12.88□□□□□ -0.35
MECP2-205ENST00000453960 NDUFA12Q9UI09 145 aa12.88□□□□□ -0.35
MECP2-205ENST00000453960 H3BMG7 143 aa12.87□□□□□ -0.35
MECP2-205ENST00000453960 GAGE7O76087 117 aa12.87□□□□□ -0.35
MECP2-205ENST00000453960 PF4P02776 101 aa12.87□□□□□ -0.35
MECP2-205ENST00000453960 GAGE12FP0CL80 117 aa12.87□□□□□ -0.35
MECP2-205ENST00000453960 GAGE12GP0CL81 117 aa12.87□□□□□ -0.35
MECP2-205ENST00000453960 GAGE12IP0CL82 117 aa12.87□□□□□ -0.35
MECP2-205ENST00000453960 MUSTN1Q8IVN3 82 aa12.87□□□□□ -0.35
MECP2-205ENST00000453960 GAGE12JA6NER3 117 aa12.86□□□□□ -0.35
MECP2-205ENST00000453960 SPINK8P0C7L1 97 aa12.86□□□□□ -0.35
MECP2-205ENST00000453960 GAGE4Q13068 117 aa12.86□□□□□ -0.35
MECP2-205ENST00000453960 GAGE5Q13069 117 aa12.86□□□□□ -0.35
MECP2-205ENST00000453960 FHL2Q14192 279 aa12.86□□□□□ -0.35
MECP2-205ENST00000453960 GAGE13Q4V321 117 aa12.86□□□□□ -0.35
MECP2-205ENST00000453960 LYRM7Q5U5X0 104 aa12.86□□□□□ -0.35
MECP2-205ENST00000453960 TRGV2A0A075B6R0 118 aa12.85□□□□□ -0.35
MECP2-205ENST00000453960 COX6A2Q02221 97 aa12.85□□□□□ -0.35
MECP2-205ENST00000453960 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.85□□□□□ -0.35
MECP2-205ENST00000453960 NDUFA1O15239 70 aa12.85□□□□□ -0.35
MECP2-205ENST00000453960 IGHV3-33P01772 117 aa12.85□□□□□ -0.35
MECP2-205ENST00000453960 TMEM101Q96IK0 257 aa12.85□□□□□ -0.35
MECP2-205ENST00000453960 NSD1Q96L73 2696 aaPredicted RBP12.84□□□□□ -0.35
MECP2-205ENST00000453960 WFDC2Q14508 124 aa12.84□□□□□ -0.35
MECP2-205ENST00000453960 TMEM243Q9BU79 118 aa12.84□□□□□ -0.35
MECP2-205ENST00000453960 MIAQ16674 131 aa12.82□□□□□ -0.36
MECP2-205ENST00000453960 ADAMTSL4-AS1Q5T5F5 129 aa12.82□□□□□ -0.36
MECP2-205ENST00000453960 TRBV20-1A0A075B6N2 111 aa12.82□□□□□ -0.36
MECP2-205ENST00000453960 SMIM9A6NGZ8 99 aa12.82□□□□□ -0.36
MECP2-205ENST00000453960 RNF151Q2KHN1 245 aa12.82□□□□□ -0.36
MECP2-205ENST00000453960 C9orf66Q5T8R8 295 aa12.82□□□□□ -0.36
MECP2-205ENST00000453960 A8MZ25 164 aa12.81□□□□□ -0.36
MECP2-205ENST00000453960 INAFM1C9JVW0 142 aa12.81□□□□□ -0.36
MECP2-205ENST00000453960 F5H768 121 aa12.81□□□□□ -0.36
MECP2-205ENST00000453960 X6R8D5 127 aa12.81□□□□□ -0.36
MECP2-205ENST00000453960 TRGV4A0A0C4DH28 118 aa12.8□□□□□ -0.36
MECP2-205ENST00000453960 LOC100131303A0A0U1RQF7 123 aa12.8□□□□□ -0.36
MECP2-205ENST00000453960 TEX48A0A1B0GUV7 120 aa12.8□□□□□ -0.36
MECP2-205ENST00000453960 SMIM1B2RUZ4 78 aa12.8□□□□□ -0.36
MECP2-205ENST00000453960 IFITM1P13164 125 aa12.79□□□□□ -0.36
MECP2-205ENST00000453960 CRLF1O75462 422 aa12.78□□□□□ -0.36
MECP2-205ENST00000453960 SMCPP49901 116 aaPredicted RBP12.78□□□□□ -0.36
MECP2-205ENST00000453960 VPS25Q9BRG1 176 aa12.78□□□□□ -0.36
MECP2-205ENST00000453960 TRBV6-8A0A0A6YYG3 113 aa12.77□□□□□ -0.36
MECP2-205ENST00000453960 LOC107984156A0A0G2JMH3 177 aa12.77□□□□□ -0.36
MECP2-205ENST00000453960 TCL1BO95988 128 aa12.77□□□□□ -0.36
MECP2-205ENST00000453960 ARL17AQ8IVW1 177 aa12.77□□□□□ -0.36
MECP2-205ENST00000453960 ATP6V0E2Q8NHE4 81 aa12.77□□□□□ -0.36
MECP2-205ENST00000453960 SPATA3Q8NHX4 192 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 385.9 ms