RNA–Protein interactions for RNA: ENST00000452448.6

EPHA3-202, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-202ENST00000452448 IGLV1-51P01701 117 aa3.46□□□□□ -1.86
EPHA3-202ENST00000452448 ZFHX3Q15911 3703 aa3.46□□□□□ -1.86
EPHA3-202ENST00000452448 ZNF407Q9C0G0 2248 aa3.46□□□□□ -1.86
EPHA3-202ENST00000452448 DOCK10Q96BY6 2186 aa3.46□□□□□ -1.86
EPHA3-202ENST00000452448 PI4KAP42356 2102 aa3.46□□□□□ -1.86
EPHA3-202ENST00000452448 F5P12259 2224 aa3.45□□□□□ -1.86
EPHA3-202ENST00000452448 LHBP01229 141 aa3.45□□□□□ -1.86
EPHA3-202ENST00000452448 IGLV2-11P01706 119 aa3.45□□□□□ -1.86
EPHA3-202ENST00000452448 EIF4EBP1Q13541 118 aaPredicted RBP3.45□□□□□ -1.86
EPHA3-202ENST00000452448 LPAL2Q16609 132 aa3.45□□□□□ -1.86
EPHA3-202ENST00000452448 IGFL4Q6B9Z1 124 aa3.45□□□□□ -1.86
EPHA3-202ENST00000452448 C22orf24Q9Y442 160 aa3.45□□□□□ -1.86
EPHA3-202ENST00000452448 KIF25-AS1Q9Y6Z4 181 aa3.45□□□□□ -1.86
EPHA3-202ENST00000452448 MAST4O15021 2626 aa3.45□□□□□ -1.86
EPHA3-202ENST00000452448 BRCA2P51587 3418 aa3.45□□□□□ -1.86
EPHA3-202ENST00000452448 ALPK2Q86TB3 2170 aa3.45□□□□□ -1.86
EPHA3-202ENST00000452448 ZGRF1Q86YA3 2104 aa3.45□□□□□ -1.86
EPHA3-202ENST00000452448 TRAV10A0A0B4J240 114 aa3.45□□□□□ -1.86
EPHA3-202ENST00000452448 KRTAP23-1A1A580 65 aa3.45□□□□□ -1.86
EPHA3-202ENST00000452448 C11orf71Q6IPW1 123 aa3.45□□□□□ -1.86
EPHA3-202ENST00000452448 LIMD2Q9BT23 127 aa3.45□□□□□ -1.86
EPHA3-202ENST00000452448 C14orf132Q9NPU4 83 aa3.45□□□□□ -1.86
EPHA3-202ENST00000452448 UNC79Q9P2D8 2635 aa3.45□□□□□ -1.86
EPHA3-202ENST00000452448 IGHV3OR16-12A0A075B7B8 117 aa3.44□□□□□ -1.86
EPHA3-202ENST00000452448 IGLV5-52A0A0A0MRZ9 124 aa3.44□□□□□ -1.86
EPHA3-202ENST00000452448 IGHV4-38-2P0DP08 117 aa3.44□□□□□ -1.86
EPHA3-202ENST00000452448 EP300Q09472 2414 aaPredicted RBP3.44□□□□□ -1.86
EPHA3-202ENST00000452448 TNRC6BQ9UPQ9 1833 aaKnown RBP3.44□□□□□ -1.86
EPHA3-202ENST00000452448 TRBV6-8A0A0A6YYG3 113 aa3.44□□□□□ -1.86
EPHA3-202ENST00000452448 IGHV3-16A0A0C4DH30 117 aa3.44□□□□□ -1.86
EPHA3-202ENST00000452448 KRTAP16-1A8MUX0 517 aa3.44□□□□□ -1.86
EPHA3-202ENST00000452448 C1orf134Q5TEV5 83 aa3.44□□□□□ -1.86
EPHA3-202ENST00000452448 KRTAP1-3Q8IUG1 177 aa3.44□□□□□ -1.86
EPHA3-202ENST00000452448 PRR15LQ9BU68 103 aa3.44□□□□□ -1.86
EPHA3-202ENST00000452448 ANKRD11Q6UB99 2663 aaPredicted RBP3.44□□□□□ -1.86
EPHA3-202ENST00000452448 TRGV3P03979 118 aa3.43□□□□□ -1.86
EPHA3-202ENST00000452448 PRB1P04280 392 aa3.43□□□□□ -1.86
EPHA3-202ENST00000452448 TSPEAR-AS2P59090 65 aa3.43□□□□□ -1.86
EPHA3-202ENST00000452448 RPL36AP83881 106 aaKnown RBP3.43□□□□□ -1.86
EPHA3-202ENST00000452448 RNASE13Q5GAN3 156 aaKnown RBP3.43□□□□□ -1.86
EPHA3-202ENST00000452448 ZNF575Q86XF7 245 aa3.43□□□□□ -1.86
EPHA3-202ENST00000452448 LYPD1Q8N2G4 141 aa3.43□□□□□ -1.86
EPHA3-202ENST00000452448 IGIPA6NJ69 53 aa3.43□□□□□ -1.86
EPHA3-202ENST00000452448 SOCS3O14543 225 aa3.43□□□□□ -1.86
EPHA3-202ENST00000452448 FSHBP01225 129 aa3.43□□□□□ -1.86
EPHA3-202ENST00000452448 IGHV3-43DP0DP04 118 aa3.43□□□□□ -1.86
EPHA3-202ENST00000452448 IGHV1-2P23083 117 aa3.43□□□□□ -1.86
EPHA3-202ENST00000452448 NDPQ00604 133 aa3.43□□□□□ -1.86
EPHA3-202ENST00000452448 NREPQ16612 68 aa3.43□□□□□ -1.86
EPHA3-202ENST00000452448 CASC2Q6XLA1 102 aa3.43□□□□□ -1.86
EPHA3-202ENST00000452448 FLNBO75369 2602 aaKnown RBP3.43□□□□□ -1.86
EPHA3-202ENST00000452448 SHANK1Q9Y566 2161 aa3.42□□□□□ -1.86
EPHA3-202ENST00000452448 CHD9Q3L8U1 2897 aa3.42□□□□□ -1.86
EPHA3-202ENST00000452448 IGHV3-38A0A0C4DH36 116 aa3.42□□□□□ -1.86
EPHA3-202ENST00000452448 C17orf98A8MV24 154 aa3.42□□□□□ -1.86
EPHA3-202ENST00000452448 CGB3P0DN86 165 aa3.42□□□□□ -1.86
EPHA3-202ENST00000452448 CGB7P0DN87 165 aa3.42□□□□□ -1.86
EPHA3-202ENST00000452448 C9orf106Q8NAJ2 232 aa3.42□□□□□ -1.86
EPHA3-202ENST00000452448 TTTY12Q9BZ98 90 aa3.42□□□□□ -1.86
EPHA3-202ENST00000452448 CDC42SE2Q9NRR3 84 aa3.42□□□□□ -1.86
EPHA3-202ENST00000452448 MKI67P46013 3256 aaKnown RBP3.42□□□□□ -1.86
EPHA3-202ENST00000452448 IGHV1OR15-1A0A075B7D0 117 aa3.42□□□□□ -1.86
EPHA3-202ENST00000452448 CRPP02741 224 aa3.42□□□□□ -1.86
EPHA3-202ENST00000452448 CMC4P56277 68 aaPredicted RBP3.42□□□□□ -1.86
EPHA3-202ENST00000452448 ASB16-AS1Q495Z4 193 aa3.42□□□□□ -1.86
EPHA3-202ENST00000452448 AMELXQ99217 191 aa3.42□□□□□ -1.86
EPHA3-202ENST00000452448 SPAG17Q6Q759 2223 aa3.42□□□□□ -1.86
EPHA3-202ENST00000452448 RP1P56715 2156 aa3.42□□□□□ -1.86
EPHA3-202ENST00000452448 TRANK1O15050 2925 aa3.41□□□□□ -1.86
EPHA3-202ENST00000452448 PROP1O75360 226 aa3.41□□□□□ -1.86
EPHA3-202ENST00000452448 C9orf66Q5T8R8 295 aa3.41□□□□□ -1.86
EPHA3-202ENST00000452448 SPINK14Q6IE38 97 aa3.41□□□□□ -1.86
EPHA3-202ENST00000452448 LYZL1Q6UWQ5 148 aa3.41□□□□□ -1.86
EPHA3-202ENST00000452448 LINC01560Q8TB33 94 aa3.41□□□□□ -1.86
EPHA3-202ENST00000452448 B9D2Q9BPU9 175 aa3.41□□□□□ -1.86
EPHA3-202ENST00000452448 S4R3C0 116 aa3.41□□□□□ -1.86
EPHA3-202ENST00000452448 SDK2Q58EX2 2172 aa3.41□□□□□ -1.86
EPHA3-202ENST00000452448 SETXQ7Z333 2677 aaKnown RBP3.41□□□□□ -1.86
EPHA3-202ENST00000452448 PRRC2AP48634 2157 aaKnown RBP3.41□□□□□ -1.86
EPHA3-202ENST00000452448 ARFGEF3Q5TH69 2177 aa3.41□□□□□ -1.86
EPHA3-202ENST00000452448 IGHV3-72A0A0B4J1Y9 119 aa3.41□□□□□ -1.86
EPHA3-202ENST00000452448 TRAV21A0A0B4J279 112 aa3.41□□□□□ -1.86
EPHA3-202ENST00000452448 RPL27AP46776 148 aaKnown RBP3.41□□□□□ -1.86
EPHA3-202ENST00000452448 UBL5Q9BZL1 73 aa3.41□□□□□ -1.86
EPHA3-202ENST00000452448 OBSCN-AS1Q96MR7 158 aa3.4□□□□□ -1.86
EPHA3-202ENST00000452448 CEP192Q8TEP8 1941 aa3.4□□□□□ -1.86
EPHA3-202ENST00000452448 MED12Q93074 2177 aa3.4□□□□□ -1.86
EPHA3-202ENST00000452448 IGLV2-18A0A075B6J9 118 aa3.4□□□□□ -1.87
EPHA3-202ENST00000452448 ROMO1P60602 79 aa3.4□□□□□ -1.87
EPHA3-202ENST00000452448 SPINK9Q5DT21 86 aa3.4□□□□□ -1.87
EPHA3-202ENST00000452448 HCP5Q6MZN7 132 aa3.39□□□□□ -1.87
EPHA3-202ENST00000452448 ZNF833PQ6ZTB9 187 aa3.39□□□□□ -1.87
EPHA3-202ENST00000452448 GCN1Q92616 2671 aaKnown RBP3.39□□□□□ -1.87
EPHA3-202ENST00000452448 CHD7Q9P2D1 2997 aa3.39□□□□□ -1.87
EPHA3-202ENST00000452448 LAMA2P24043 3122 aaKnown RBP3.39□□□□□ -1.87
EPHA3-202ENST00000452448 SEC16AO15027 2179 aa3.39□□□□□ -1.87
EPHA3-202ENST00000452448 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.39□□□□□ -1.87
EPHA3-202ENST00000452448 C17orf58Q2M2W7 97 aa3.39□□□□□ -1.87
EPHA3-202ENST00000452448 Q8N9P0 234 aaPredicted RBP3.39□□□□□ -1.87
EPHA3-202ENST00000452448 TMEM14CQ9P0S9 112 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms