RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 TRAV9-1A0A075B6T8 112 aa8.33□□□□□ -1.08
CHD3-206ENST00000452447 hDV102S1A0JD36 115 aa8.33□□□□□ -1.08
CHD3-206ENST00000452447 FOXA3P55318 350 aaPredicted RBP8.33□□□□□ -1.08
CHD3-206ENST00000452447 AMMECR1LQ6DCA0 310 aa8.33□□□□□ -1.08
CHD3-206ENST00000452447 AP5S1Q9NUS5 200 aa8.33□□□□□ -1.08
CHD3-206ENST00000452447 V9GYV3 84 aa8.33□□□□□ -1.08
CHD3-206ENST00000452447 IGKV3OR2-268A0A0C4DH90 116 aa8.32□□□□□ -1.08
CHD3-206ENST00000452447 SDHAF1A6NFY7 115 aa8.32□□□□□ -1.08
CHD3-206ENST00000452447 NCR2O95944 276 aa8.32□□□□□ -1.08
CHD3-206ENST00000452447 APCSP02743 223 aa8.31□□□□□ -1.08
CHD3-206ENST00000452447 SNRPEP62304 92 aaKnown RBP8.31□□□□□ -1.08
CHD3-206ENST00000452447 RNASEKQ6P5S7 137 aaKnown RBP8.31□□□□□ -1.08
CHD3-206ENST00000452447 PKHD1L1Q86WI1 4243 aa8.31□□□□□ -1.08
CHD3-206ENST00000452447 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.31□□□□□ -1.08
CHD3-206ENST00000452447 SMIM27A0A1W2PRY6 76 aa8.31□□□□□ -1.08
CHD3-206ENST00000452447 COLCA2A8K830 154 aa8.31□□□□□ -1.08
CHD3-206ENST00000452447 HIGD1CA8MV81 97 aa8.31□□□□□ -1.08
CHD3-206ENST00000452447 H7C423 109 aa8.31□□□□□ -1.08
CHD3-206ENST00000452447 PMCHP20382 165 aa8.31□□□□□ -1.08
CHD3-206ENST00000452447 CNBPP62633 177 aaKnown RBP8.31□□□□□ -1.08
CHD3-206ENST00000452447 C2orf88Q9BSF0 95 aa8.31□□□□□ -1.08
CHD3-206ENST00000452447 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.3□□□□□ -1.08
CHD3-206ENST00000452447 A0A1B0GUT8 65 aa8.3□□□□□ -1.08
CHD3-206ENST00000452447 A0A1B0GW15 77 aa8.3□□□□□ -1.08
CHD3-206ENST00000452447 IGKV2-29A2NJV5 120 aaPredicted RBP8.3□□□□□ -1.08
CHD3-206ENST00000452447 I3L3M4 83 aa8.3□□□□□ -1.08
CHD3-206ENST00000452447 SDIM1Q6ZPB5 146 aa8.3□□□□□ -1.08
CHD3-206ENST00000452447 LRP1Q07954 4544 aaKnown RBP8.3□□□□□ -1.08
CHD3-206ENST00000452447 GAGE12HA6NDE8 117 aa8.29□□□□□ -1.08
CHD3-206ENST00000452447 COX19Q49B96 90 aa8.29□□□□□ -1.08
CHD3-206ENST00000452447 CFAP161Q6P656 301 aa8.29□□□□□ -1.08
CHD3-206ENST00000452447 ATP5L2Q7Z4Y8 100 aa8.29□□□□□ -1.08
CHD3-206ENST00000452447 CBLN2Q8IUK8 224 aa8.29□□□□□ -1.08
CHD3-206ENST00000452447 FAT3Q8TDW7 4589 aa8.28□□□□□ -1.08
CHD3-206ENST00000452447 IGHV3-64A0A075B6Q5 118 aa8.28□□□□□ -1.08
CHD3-206ENST00000452447 KRTAP29-1A8MX34 341 aaPredicted RBP8.28□□□□□ -1.08
CHD3-206ENST00000452447 FGF6P10767 208 aa8.28□□□□□ -1.08
CHD3-206ENST00000452447 RIGQ13278 110 aa8.28□□□□□ -1.08
CHD3-206ENST00000452447 DPH3Q96FX2 82 aa8.28□□□□□ -1.08
CHD3-206ENST00000452447 TMEM191AQ9H0A3 160 aa8.28□□□□□ -1.08
CHD3-206ENST00000452447 ST20Q9HBF5 79 aa8.28□□□□□ -1.08
CHD3-206ENST00000452447 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.28□□□□□ -1.08
CHD3-206ENST00000452447 TRBV6-5A0A0K0K1A5 114 aa8.27□□□□□ -1.09
CHD3-206ENST00000452447 ZNF25P17030 456 aaPredicted RBP8.27□□□□□ -1.09
CHD3-206ENST00000452447 KRTAP10-4P60372 401 aaPredicted RBP8.27□□□□□ -1.09
CHD3-206ENST00000452447 RPL37AP61513 92 aaKnown RBP8.27□□□□□ -1.09
CHD3-206ENST00000452447 TMEM101Q96IK0 257 aa8.27□□□□□ -1.09
CHD3-206ENST00000452447 FABP9Q0Z7S8 132 aa8.27□□□□□ -1.09
CHD3-206ENST00000452447 NUP35Q8NFH5 326 aa8.27□□□□□ -1.09
CHD3-206ENST00000452447 CHCHD10Q8WYQ3 142 aaPredicted RBP8.27□□□□□ -1.09
CHD3-206ENST00000452447 GAS8-AS1O95177 125 aa8.26□□□□□ -1.09
CHD3-206ENST00000452447 MRAP2Q96G30 205 aa8.26□□□□□ -1.09
CHD3-206ENST00000452447 C14orf144Q96I85 54 aa8.26□□□□□ -1.09
CHD3-206ENST00000452447 PANO1I0J062 215 aa8.25□□□□□ -1.09
CHD3-206ENST00000452447 SLPIP03973 132 aa8.25□□□□□ -1.09
CHD3-206ENST00000452447 HBBP68871 147 aa8.25□□□□□ -1.09
CHD3-206ENST00000452447 AMN1Q8IY45 258 aa8.25□□□□□ -1.09
CHD3-206ENST00000452447 C15orf56Q8N910 161 aa8.25□□□□□ -1.09
CHD3-206ENST00000452447 OR5A1Q8NGJ0 315 aa8.25□□□□□ -1.09
CHD3-206ENST00000452447 RNF185Q96GF1 192 aa8.25□□□□□ -1.09
CHD3-206ENST00000452447 TRBV24-1A0A075B6N3 115 aa8.24□□□□□ -1.09
CHD3-206ENST00000452447 TSHBP01222 138 aa8.24□□□□□ -1.09
CHD3-206ENST00000452447 MT-ND6P03923 174 aa8.24□□□□□ -1.09
CHD3-206ENST00000452447 TRBV27A0A0K0K1C4 114 aa8.23□□□□□ -1.09
CHD3-206ENST00000452447 A0A1B0GV90 55 aa8.23□□□□□ -1.09
CHD3-206ENST00000452447 TSTD3H0UI37 97 aa8.23□□□□□ -1.09
CHD3-206ENST00000452447 PPP1R17O96001 155 aa8.23□□□□□ -1.09
CHD3-206ENST00000452447 ESDP10768 282 aa8.23□□□□□ -1.09
CHD3-206ENST00000452447 S100A2P29034 98 aa8.23□□□□□ -1.09
CHD3-206ENST00000452447 RPS10P46783 165 aaKnown RBP8.23□□□□□ -1.09
CHD3-206ENST00000452447 POLR2KP53803 58 aaKnown RBP8.23□□□□□ -1.09
CHD3-206ENST00000452447 CIRBPQ14011 172 aaKnown RBP8.23□□□□□ -1.09
CHD3-206ENST00000452447 HIGD2BQ4VC39 106 aa8.23□□□□□ -1.09
CHD3-206ENST00000452447 TCAPO15273 167 aa8.22□□□□□ -1.09
CHD3-206ENST00000452447 OXTP01178 125 aa8.22□□□□□ -1.09
CHD3-206ENST00000452447 CHTF8P0CG12 524 aa8.22□□□□□ -1.09
CHD3-206ENST00000452447 XCL1P47992 114 aa8.22□□□□□ -1.09
CHD3-206ENST00000452447 A0A087WYN8 130 aa8.22□□□□□ -1.09
CHD3-206ENST00000452447 VCYO14598 125 aa8.22□□□□□ -1.09
CHD3-206ENST00000452447 RAB5AP20339 215 aa8.22□□□□□ -1.09
CHD3-206ENST00000452447 FCER1GP30273 86 aa8.22□□□□□ -1.09
CHD3-206ENST00000452447 MRPL54Q6P161 138 aaKnown RBP8.22□□□□□ -1.09
CHD3-206ENST00000452447 GVQW2A0A096LPI5 108 aaPredicted RBP8.21□□□□□ -1.1
CHD3-206ENST00000452447 LINC00959A0A1B0GUT2 108 aa8.21□□□□□ -1.1
CHD3-206ENST00000452447 SMKR1H3BMG3 65 aa8.21□□□□□ -1.1
CHD3-206ENST00000452447 CCL25O15444 150 aa8.21□□□□□ -1.1
CHD3-206ENST00000452447 DDTP30046 118 aa8.21□□□□□ -1.1
CHD3-206ENST00000452447 CAMPP49913 170 aa8.21□□□□□ -1.1
CHD3-206ENST00000452447 COX6A2Q02221 97 aa8.21□□□□□ -1.1
CHD3-206ENST00000452447 FOXI1Q12951 378 aa8.21□□□□□ -1.1
CHD3-206ENST00000452447 SS18Q15532 418 aa8.21□□□□□ -1.1
CHD3-206ENST00000452447 SPACA4Q8TDM5 124 aa8.21□□□□□ -1.1
CHD3-206ENST00000452447 KIR2DL4Q99706 377 aa8.21□□□□□ -1.1
CHD3-206ENST00000452447 GNB1LQ9BYB4 327 aa8.21□□□□□ -1.1
CHD3-206ENST00000452447 CDC42SE2Q9NRR3 84 aa8.21□□□□□ -1.1
CHD3-206ENST00000452447 SUMO2P61956 95 aaKnown RBP8.2□□□□□ -1.1
CHD3-206ENST00000452447 SMAGPQ0VAQ4 97 aa8.2□□□□□ -1.1
CHD3-206ENST00000452447 MRPL52Q86TS9 123 aaKnown RBP8.2□□□□□ -1.1
CHD3-206ENST00000452447 ZNF664Q8N3J9 261 aa8.2□□□□□ -1.1
CHD3-206ENST00000452447 TGIF2-C20orf24A0A0A6YYL0 155 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 136.5 ms