RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 IGHV1-58A0A0C4DH39 117 aa17.71■□□□□ 0.43
CBX4-202ENST00000448310 HIGD1CA8MV81 97 aa17.71■□□□□ 0.43
CBX4-202ENST00000448310 A0A1B0GUT8 65 aa17.7■□□□□ 0.42
CBX4-202ENST00000448310 SMIM7Q9BQ49 75 aa17.7■□□□□ 0.42
CBX4-202ENST00000448310 TMEM191AQ9H0A3 160 aa17.7■□□□□ 0.42
CBX4-202ENST00000448310 POLR2KP53803 58 aaKnown RBP17.69■□□□□ 0.42
CBX4-202ENST00000448310 TSKUQ8WUA8 353 aa17.69■□□□□ 0.42
CBX4-202ENST00000448310 CARD19Q96LW7 228 aa17.69■□□□□ 0.42
CBX4-202ENST00000448310 CDC42SE2Q9NRR3 84 aa17.69■□□□□ 0.42
CBX4-202ENST00000448310 RAB4AP20338 218 aa17.68■□□□□ 0.42
CBX4-202ENST00000448310 SS18Q15532 418 aa17.68■□□□□ 0.42
CBX4-202ENST00000448310 LINC01551Q86U37 167 aa17.68■□□□□ 0.42
CBX4-202ENST00000448310 AKAP14Q86UN6 197 aa17.68■□□□□ 0.42
CBX4-202ENST00000448310 AMN1Q8IY45 258 aa17.68■□□□□ 0.42
CBX4-202ENST00000448310 MRPL52Q86TS9 123 aaKnown RBP17.67■□□□□ 0.42
CBX4-202ENST00000448310 SMKR1H3BMG3 65 aa17.66■□□□□ 0.42
CBX4-202ENST00000448310 ZNF664Q8N3J9 261 aa17.66■□□□□ 0.42
CBX4-202ENST00000448310 EIF5A2Q9GZV4 153 aaKnown RBP17.66■□□□□ 0.42
CBX4-202ENST00000448310 TRBV27A0A0K0K1C4 114 aa17.65■□□□□ 0.42
CBX4-202ENST00000448310 C7orf77A4D0Y5 90 aa17.65■□□□□ 0.42
CBX4-202ENST00000448310 CD164L2Q6UWJ8 174 aa17.65■□□□□ 0.42
CBX4-202ENST00000448310 hCG_2014768A0A024R1R8 64 aa17.64■□□□□ 0.41
CBX4-202ENST00000448310 LINC00474Q9P2X8 69 aa17.64■□□□□ 0.41
CBX4-202ENST00000448310 ZNF727A8MUV8 499 aa17.63■□□□□ 0.41
CBX4-202ENST00000448310 ZNF561-AS1K7EIQ3 104 aa17.63■□□□□ 0.41
CBX4-202ENST00000448310 SYCNQ0VAF6 134 aa17.63■□□□□ 0.41
CBX4-202ENST00000448310 ODF1Q14990 250 aa17.63■□□□□ 0.41
CBX4-202ENST00000448310 LINC01600Q96MT4 127 aa17.63■□□□□ 0.41
CBX4-202ENST00000448310 OSTCQ9NRP0 149 aa17.63■□□□□ 0.41
CBX4-202ENST00000448310 FAM210AQ96ND0 272 aa17.62■□□□□ 0.41
CBX4-202ENST00000448310 PKIGQ9Y2B9 76 aa17.62■□□□□ 0.41
CBX4-202ENST00000448310 SRP19P09132 144 aaKnown RBP17.6■□□□□ 0.41
CBX4-202ENST00000448310 FCER1GP30273 86 aa17.6■□□□□ 0.41
CBX4-202ENST00000448310 RNASE13Q5GAN3 156 aaKnown RBP17.6■□□□□ 0.41
CBX4-202ENST00000448310 V9GYV3 84 aa17.6■□□□□ 0.41
CBX4-202ENST00000448310 LRP2P98164 4655 aa17.59■□□□□ 0.41
CBX4-202ENST00000448310 VCYO14598 125 aa17.59■□□□□ 0.41
CBX4-202ENST00000448310 CAMPP49913 170 aa17.59■□□□□ 0.41
CBX4-202ENST00000448310 NUP35Q8NFH5 326 aa17.59■□□□□ 0.41
CBX4-202ENST00000448310 RIGQ13278 110 aa17.58■□□□□ 0.4
CBX4-202ENST00000448310 NRACQ8N912 160 aa17.58■□□□□ 0.4
CBX4-202ENST00000448310 IGLV4-69A0A075B6H9 119 aa17.57■□□□□ 0.4
CBX4-202ENST00000448310 MALP21145 153 aa17.56■□□□□ 0.4
CBX4-202ENST00000448310 PTTG1IPP53801 180 aa17.56■□□□□ 0.4
CBX4-202ENST00000448310 SUMO2P61956 95 aaKnown RBP17.56■□□□□ 0.4
CBX4-202ENST00000448310 GAGE2BQ13066 116 aa17.56■□□□□ 0.4
CBX4-202ENST00000448310 UBE2D4Q9Y2X8 147 aa17.56■□□□□ 0.4
CBX4-202ENST00000448310 C1orf196B1AJZ1 125 aa17.55■□□□□ 0.4
CBX4-202ENST00000448310 SPINK6Q6UWN8 80 aa17.55■□□□□ 0.4
CBX4-202ENST00000448310 COX7A2LO14548 114 aa17.54■□□□□ 0.4
CBX4-202ENST00000448310 TRAV13-1A0A0B4J241 112 aa17.53■□□□□ 0.4
CBX4-202ENST00000448310 A0A0J9YXV3 536 aa17.53■□□□□ 0.4
CBX4-202ENST00000448310 LOC107984640A0A0U1RRK4 108 aa17.53■□□□□ 0.4
CBX4-202ENST00000448310 Q6ZRP5 223 aa17.53■□□□□ 0.4
CBX4-202ENST00000448310 ISOC2Q96AB3 205 aa17.53■□□□□ 0.4
CBX4-202ENST00000448310 CSDC2Q9Y534 153 aaKnown RBP17.53■□□□□ 0.4
CBX4-202ENST00000448310 Q6ZUT4 128 aa17.52■□□□□ 0.4
CBX4-202ENST00000448310 KIR2DL4Q99706 377 aa17.52■□□□□ 0.4
CBX4-202ENST00000448310 PPP1R17O96001 155 aa17.51■□□□□ 0.39
CBX4-202ENST00000448310 SRSF9Q13242 221 aaKnown RBP eCLIP17.51■□□□□ 0.39
CBX4-202ENST00000448310 MRPL51Q4U2R6 128 aaKnown RBP17.51■□□□□ 0.39
CBX4-202ENST00000448310 C5orf38Q86SI9 138 aa17.51■□□□□ 0.39
CBX4-202ENST00000448310 CAMK2N2Q96S95 79 aa17.51■□□□□ 0.39
CBX4-202ENST00000448310 REG3GQ6UW15 175 aa17.5■□□□□ 0.39
CBX4-202ENST00000448310 NAT8BQ9UHF3 227 aa17.5■□□□□ 0.39
CBX4-202ENST00000448310 A0A1W2PNN7 141 aa17.49■□□□□ 0.39
CBX4-202ENST00000448310 RPL23P62829 140 aaKnown RBP17.49■□□□□ 0.39
CBX4-202ENST00000448310 SMAGPQ0VAQ4 97 aa17.49■□□□□ 0.39
CBX4-202ENST00000448310 TMEM241Q24JQ0 296 aa17.49■□□□□ 0.39
CBX4-202ENST00000448310 FAM104BQ5XKR9 115 aa17.49■□□□□ 0.39
CBX4-202ENST00000448310 KRTAP10-8P60410 259 aa17.48■□□□□ 0.39
CBX4-202ENST00000448310 PPP1R2P9O14990 202 aa17.47■□□□□ 0.39
CBX4-202ENST00000448310 ADIRFQ15847 76 aa17.47■□□□□ 0.39
CBX4-202ENST00000448310 RNF213Q63HN8 5207 aa17.46■□□□□ 0.39
CBX4-202ENST00000448310 APOMO95445 188 aa17.46■□□□□ 0.39
CBX4-202ENST00000448310 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP17.45■□□□□ 0.38
CBX4-202ENST00000448310 FAM74A3Q4VXF1 159 aa17.45■□□□□ 0.38
CBX4-202ENST00000448310 C2orf48Q96LS8 159 aa17.45■□□□□ 0.38
CBX4-202ENST00000448310 C9JQL5 133 aa17.44■□□□□ 0.38
CBX4-202ENST00000448310 RPL18AQ02543 176 aaKnown RBP17.44■□□□□ 0.38
CBX4-202ENST00000448310 SPAG11BQ08648 103 aa17.44■□□□□ 0.38
CBX4-202ENST00000448310 TMEM18Q96B42 140 aa17.44■□□□□ 0.38
CBX4-202ENST00000448310 OPRPNQ99935 248 aaPredicted RBP17.44■□□□□ 0.38
CBX4-202ENST00000448310 TIMM21Q9BVV7 248 aa17.44■□□□□ 0.38
CBX4-202ENST00000448310 SMIM27A0A1W2PRY6 76 aa17.43■□□□□ 0.38
CBX4-202ENST00000448310 RPL39P62891 51 aaKnown RBP17.43■□□□□ 0.38
CBX4-202ENST00000448310 C9orf116Q5BN46 136 aaPredicted RBP17.43■□□□□ 0.38
CBX4-202ENST00000448310 C20orf78Q9BR46 151 aa17.42■□□□□ 0.38
CBX4-202ENST00000448310 CKS2P33552 79 aa17.41■□□□□ 0.38
CBX4-202ENST00000448310 NAT8Q9UHE5 227 aa17.41■□□□□ 0.38
CBX4-202ENST00000448310 TRBV24-1A0A075B6N3 115 aa17.4■□□□□ 0.38
CBX4-202ENST00000448310 LINC00862A6NCI5 91 aa17.4■□□□□ 0.38
CBX4-202ENST00000448310 FAM104AQ969W3 186 aa17.4■□□□□ 0.38
CBX4-202ENST00000448310 TNFRSF6BO95407 300 aa17.39■□□□□ 0.37
CBX4-202ENST00000448310 PSORS1C2Q9UIG4 136 aa17.39■□□□□ 0.37
CBX4-202ENST00000448310 SRSF3P84103 164 aaKnown RBP17.38■□□□□ 0.37
CBX4-202ENST00000448310 PHF5AQ7RTV0 110 aaKnown RBP17.38■□□□□ 0.37
CBX4-202ENST00000448310 RPL32P62910 135 aaKnown RBP17.37■□□□□ 0.37
CBX4-202ENST00000448310 MRPL54Q6P161 138 aaKnown RBP17.37■□□□□ 0.37
CBX4-202ENST00000448310 ORAOV1Q8WV07 137 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms