RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 TRBV27A0A0K0K1C4 114 aa3.01□□□□□ -1.93
HMGB1P16-201ENST00000447155 TRBV10-3A0A0K0K1G6 114 aa3.01□□□□□ -1.93
HMGB1P16-201ENST00000447155 PINLYPA6NC86 204 aa3.01□□□□□ -1.93
HMGB1P16-201ENST00000447155 E7EUB6 86 aa3.01□□□□□ -1.93
HMGB1P16-201ENST00000447155 NDUFA1O15239 70 aa3.01□□□□□ -1.93
HMGB1P16-201ENST00000447155 IGHV1-8P0DP01 117 aa3.01□□□□□ -1.93
HMGB1P16-201ENST00000447155 IGHV3-30-3P0DP02 117 aa3.01□□□□□ -1.93
HMGB1P16-201ENST00000447155 COX7A1P24310 79 aa3.01□□□□□ -1.93
HMGB1P16-201ENST00000447155 KRTAP10-3P60369 221 aa3.01□□□□□ -1.93
HMGB1P16-201ENST00000447155 NKAPP1Q8N9T2 125 aa3.01□□□□□ -1.93
HMGB1P16-201ENST00000447155 BRK1Q8WUW1 75 aa3.01□□□□□ -1.93
HMGB1P16-201ENST00000447155 RPL39LQ96EH5 51 aaKnown RBP3.01□□□□□ -1.93
HMGB1P16-201ENST00000447155 FAM19A4Q96LR4 140 aa3.01□□□□□ -1.93
HMGB1P16-201ENST00000447155 UPK3BQ9BT76 320 aa3.01□□□□□ -1.93
HMGB1P16-201ENST00000447155 DNAJC13O75165 2243 aa3.01□□□□□ -1.93
HMGB1P16-201ENST00000447155 MALRD1Q5VYJ5 2156 aa3.01□□□□□ -1.93
HMGB1P16-201ENST00000447155 GOLGB1Q14789 3259 aaKnown RBP3□□□□□ -1.93
HMGB1P16-201ENST00000447155 IGLV11-55A0A075B6I3 123 aa3□□□□□ -1.93
HMGB1P16-201ENST00000447155 M0R1B8 84 aa3□□□□□ -1.93
HMGB1P16-201ENST00000447155 IGHV1-46P01743 117 aa3□□□□□ -1.93
HMGB1P16-201ENST00000447155 BAALC-AS2P0C853 105 aa3□□□□□ -1.93
HMGB1P16-201ENST00000447155 APELAP0DMC3 54 aa3□□□□□ -1.93
HMGB1P16-201ENST00000447155 CCL3L1P16619 93 aa3□□□□□ -1.93
HMGB1P16-201ENST00000447155 RNASE4P34096 147 aaKnown RBP3□□□□□ -1.93
HMGB1P16-201ENST00000447155 CASC10Q5T4H9 136 aa3□□□□□ -1.93
HMGB1P16-201ENST00000447155 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3□□□□□ -1.93
HMGB1P16-201ENST00000447155 Q6ZS52 159 aa3□□□□□ -1.93
HMGB1P16-201ENST00000447155 C6orf223Q8N319 242 aa3□□□□□ -1.93
HMGB1P16-201ENST00000447155 C10orf105Q8TEF2 133 aa3□□□□□ -1.93
HMGB1P16-201ENST00000447155 DYNLRB2Q8TF09 96 aa3□□□□□ -1.93
HMGB1P16-201ENST00000447155 EEF1AKMT3Q96AZ1 226 aa3□□□□□ -1.93
HMGB1P16-201ENST00000447155 UBL5Q9BZL1 73 aa3□□□□□ -1.93
HMGB1P16-201ENST00000447155 CELA1Q9UNI1 258 aa3□□□□□ -1.93
HMGB1P16-201ENST00000447155 PKIGQ9Y2B9 76 aa3□□□□□ -1.93
HMGB1P16-201ENST00000447155 CACNA1EQ15878 2313 aa3□□□□□ -1.93
HMGB1P16-201ENST00000447155 NACAE9PAV3 2078 aa3□□□□□ -1.93
HMGB1P16-201ENST00000447155 PRRC2AP48634 2157 aaKnown RBP3□□□□□ -1.93
HMGB1P16-201ENST00000447155 IGHV3-64A0A075B6Q5 118 aa2.99□□□□□ -1.93
HMGB1P16-201ENST00000447155 TRAV7A0A075B6U4 112 aa2.99□□□□□ -1.93
HMGB1P16-201ENST00000447155 JMJD7-PLA2G4BH0Y9G9 81 aa2.99□□□□□ -1.93
HMGB1P16-201ENST00000447155 H0YGX0 51 aa2.99□□□□□ -1.93
HMGB1P16-201ENST00000447155 BLCAPP62952 87 aa2.99□□□□□ -1.93
HMGB1P16-201ENST00000447155 RBM3P98179 157 aaKnown RBP2.99□□□□□ -1.93
HMGB1P16-201ENST00000447155 KLKP1Q107X0 134 aa2.99□□□□□ -1.93
HMGB1P16-201ENST00000447155 C20orf197Q8N268 126 aa2.99□□□□□ -1.93
HMGB1P16-201ENST00000447155 DEFB119Q8N690 84 aa2.99□□□□□ -1.93
HMGB1P16-201ENST00000447155 MDS2Q8NDY4 140 aa2.99□□□□□ -1.93
HMGB1P16-201ENST00000447155 DEFB108BQ8NET1 73 aa2.99□□□□□ -1.93
HMGB1P16-201ENST00000447155 ZNRD1Q9P1U0 126 aa2.99□□□□□ -1.93
HMGB1P16-201ENST00000447155 ARHGAP32A7KAX9 2087 aa2.98□□□□□ -1.93
HMGB1P16-201ENST00000447155 IGHV3-72A0A0B4J1Y9 119 aa2.98□□□□□ -1.93
HMGB1P16-201ENST00000447155 IGKV3D-7A0A0C4DH55 119 aa2.98□□□□□ -1.93
HMGB1P16-201ENST00000447155 BUB1B-PAK6H3BSN5 160 aa2.98□□□□□ -1.93
HMGB1P16-201ENST00000447155 LOXP28300 417 aaPredicted RBP2.98□□□□□ -1.93
HMGB1P16-201ENST00000447155 POLR2KP53803 58 aaKnown RBP2.98□□□□□ -1.93
HMGB1P16-201ENST00000447155 RPL39P62891 51 aaKnown RBP2.98□□□□□ -1.93
HMGB1P16-201ENST00000447155 LINC00336Q6ZUF6 198 aa2.98□□□□□ -1.93
HMGB1P16-201ENST00000447155 C1orf158Q8N1D5 194 aa2.98□□□□□ -1.93
HMGB1P16-201ENST00000447155 C20orf203Q8NBC4 194 aa2.98□□□□□ -1.93
HMGB1P16-201ENST00000447155 NPBQ8NG41 125 aa2.98□□□□□ -1.93
HMGB1P16-201ENST00000447155 ANAPC11Q9NYG5 84 aa2.98□□□□□ -1.93
HMGB1P16-201ENST00000447155 ORMDL1Q9P0S3 153 aa2.98□□□□□ -1.93
HMGB1P16-201ENST00000447155 KAAG1Q9UBP8 84 aa2.98□□□□□ -1.93
HMGB1P16-201ENST00000447155 CENPFP49454 3210 aa2.98□□□□□ -1.93
HMGB1P16-201ENST00000447155 PLAC8L1A1L4L8 177 aa2.97□□□□□ -1.93
HMGB1P16-201ENST00000447155 H0Y9J4 135 aa2.97□□□□□ -1.93
HMGB1P16-201ENST00000447155 H3BQ85 93 aa2.97□□□□□ -1.93
HMGB1P16-201ENST00000447155 OXTP01178 125 aa2.97□□□□□ -1.93
HMGB1P16-201ENST00000447155 RPL28P46779 137 aaKnown RBP2.97□□□□□ -1.93
HMGB1P16-201ENST00000447155 XCL1P47992 114 aa2.97□□□□□ -1.93
HMGB1P16-201ENST00000447155 FAM74A4Q5TZK3 123 aa2.97□□□□□ -1.93
HMGB1P16-201ENST00000447155 PRR15Q8IV56 129 aa2.97□□□□□ -1.93
HMGB1P16-201ENST00000447155 APRG1Q8IVJ8 170 aa2.97□□□□□ -1.93
HMGB1P16-201ENST00000447155 HES7Q9BYE0 225 aa2.97□□□□□ -1.93
HMGB1P16-201ENST00000447155 XCL2Q9UBD3 114 aa2.97□□□□□ -1.93
HMGB1P16-201ENST00000447155 UBE2D4Q9Y2X8 147 aa2.97□□□□□ -1.93
HMGB1P16-201ENST00000447155 SDK2Q58EX2 2172 aa2.97□□□□□ -1.93
HMGB1P16-201ENST00000447155 KIAA0100Q14667 2235 aaKnown RBP2.96□□□□□ -1.94
HMGB1P16-201ENST00000447155 TRBV7-6A0A0J9YX20 115 aa2.96□□□□□ -1.94
HMGB1P16-201ENST00000447155 A0A0J9YXV3 536 aa2.96□□□□□ -1.94
HMGB1P16-201ENST00000447155 LYRM9A8MSI8 78 aa2.96□□□□□ -1.94
HMGB1P16-201ENST00000447155 F6UB75 175 aa2.96□□□□□ -1.94
HMGB1P16-201ENST00000447155 CD164Q04900 197 aa2.96□□□□□ -1.94
HMGB1P16-201ENST00000447155 MRPL55Q7Z7F7 128 aaKnown RBP2.96□□□□□ -1.94
HMGB1P16-201ENST00000447155 WFDC11Q8NEX6 87 aa2.96□□□□□ -1.94
HMGB1P16-201ENST00000447155 LINC00308Q8TCZ7 52 aa2.96□□□□□ -1.94
HMGB1P16-201ENST00000447155 DEFB127Q9H1M4 99 aa2.96□□□□□ -1.94
HMGB1P16-201ENST00000447155 C14orf132Q9NPU4 83 aa2.96□□□□□ -1.94
HMGB1P16-201ENST00000447155 U3KQA8 63 aa2.96□□□□□ -1.94
HMGB1P16-201ENST00000447155 KNL1Q8NG31 2342 aa2.96□□□□□ -1.94
HMGB1P16-201ENST00000447155 PLXNB1O43157 2135 aa2.95□□□□□ -1.94
HMGB1P16-201ENST00000447155 SVILO95425 2214 aa2.95□□□□□ -1.94
HMGB1P16-201ENST00000447155 A0A0U1RQV1 116 aa2.95□□□□□ -1.94
HMGB1P16-201ENST00000447155 FAM223BA6NKX1 122 aa2.95□□□□□ -1.94
HMGB1P16-201ENST00000447155 KRTAP4-16G5E9R7 235 aaPredicted RBP2.95□□□□□ -1.94
HMGB1P16-201ENST00000447155 H7BZZ5 65 aa2.95□□□□□ -1.94
HMGB1P16-201ENST00000447155 ZNF861PO60384 105 aa2.95□□□□□ -1.94
HMGB1P16-201ENST00000447155 ERC2-IT1O76042 136 aa2.95□□□□□ -1.94
HMGB1P16-201ENST00000447155 TRBV12-3P01733 135 aa2.95□□□□□ -1.94
HMGB1P16-201ENST00000447155 CCKP06307 115 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms