RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 NTM-AS1Q6ZSK4 140 aa11.09□□□□□ -0.63
SNX13-204ENST00000444712 TM2D2Q9BX73 214 aa11.09□□□□□ -0.63
SNX13-204ENST00000444712 H3BRM9 83 aa11.09□□□□□ -0.63
SNX13-204ENST00000444712 J3QQQ9 107 aa11.09□□□□□ -0.63
SNX13-204ENST00000444712 IGHV4-30-4P0DP06 118 aa11.09□□□□□ -0.63
SNX13-204ENST00000444712 HIST1H4GQ99525 98 aa11.09□□□□□ -0.63
SNX13-204ENST00000444712 CYSRT1A8MQ03 144 aa11.08□□□□□ -0.64
SNX13-204ENST00000444712 LINC00694P0DN24 101 aa11.08□□□□□ -0.64
SNX13-204ENST00000444712 TMEM101Q96IK0 257 aa11.08□□□□□ -0.64
SNX13-204ENST00000444712 UBE2D1P51668 147 aa11.08□□□□□ -0.64
SNX13-204ENST00000444712 TIRAPP58753 221 aa11.08□□□□□ -0.64
SNX13-204ENST00000444712 FAM222AQ5U5X8 452 aa11.08□□□□□ -0.64
SNX13-204ENST00000444712 AMMECR1LQ6DCA0 310 aa11.08□□□□□ -0.64
SNX13-204ENST00000444712 OR5A1Q8NGJ0 315 aa11.08□□□□□ -0.64
SNX13-204ENST00000444712 GEMIN7Q9H840 131 aaKnown RBP11.08□□□□□ -0.64
SNX13-204ENST00000444712 PTTG1IPP53801 180 aa11.07□□□□□ -0.64
SNX13-204ENST00000444712 RNF183Q96D59 192 aa11.07□□□□□ -0.64
SNX13-204ENST00000444712 PRO0255Q9UI72 69 aa11.07□□□□□ -0.64
SNX13-204ENST00000444712 LOC100131303A0A0U1RQF7 123 aa11.06□□□□□ -0.64
SNX13-204ENST00000444712 RNASE13Q5GAN3 156 aaKnown RBP11.06□□□□□ -0.64
SNX13-204ENST00000444712 NOTCH3Q9UM47 2321 aa11.06□□□□□ -0.64
SNX13-204ENST00000444712 IGHV4-28A0A0C4DH34 117 aa11.06□□□□□ -0.64
SNX13-204ENST00000444712 SMIM13P0DJ93 91 aa11.06□□□□□ -0.64
SNX13-204ENST00000444712 FAM19A3Q7Z5A8 133 aa11.06□□□□□ -0.64
SNX13-204ENST00000444712 MAST4O15021 2626 aa11.05□□□□□ -0.64
SNX13-204ENST00000444712 HERVK_113P63121 156 aa11.05□□□□□ -0.64
SNX13-204ENST00000444712 LINC00469Q8N7U9 141 aa11.05□□□□□ -0.64
SNX13-204ENST00000444712 NIPBLQ6KC79 2804 aaeCLIP11.05□□□□□ -0.64
SNX13-204ENST00000444712 TRBV6-8A0A0A6YYG3 113 aa11.04□□□□□ -0.64
SNX13-204ENST00000444712 TEX48A0A1B0GUV7 120 aa11.04□□□□□ -0.64
SNX13-204ENST00000444712 A8MZ25 164 aa11.04□□□□□ -0.64
SNX13-204ENST00000444712 FXYD2P54710 66 aa11.04□□□□□ -0.64
SNX13-204ENST00000444712 EGFEM1PQ0D2K5 195 aa11.04□□□□□ -0.64
SNX13-204ENST00000444712 SPANXB1Q9NS25 103 aaPredicted RBP11.04□□□□□ -0.64
SNX13-204ENST00000444712 IGLV5-45A0A087WSX0 123 aa11.04□□□□□ -0.64
SNX13-204ENST00000444712 IGHV1-58A0A0C4DH39 117 aa11.04□□□□□ -0.64
SNX13-204ENST00000444712 TSPEAR-AS2P59090 65 aa11.04□□□□□ -0.64
SNX13-204ENST00000444712 DAD1P61803 113 aa11.04□□□□□ -0.64
SNX13-204ENST00000444712 Q8NAQ8 132 aa11.04□□□□□ -0.64
SNX13-204ENST00000444712 ATRQ13535 2644 aa11.04□□□□□ -0.64
SNX13-204ENST00000444712 TMEM238LA0A1B0GVL6 79 aa11.03□□□□□ -0.64
SNX13-204ENST00000444712 A6NJY4 79 aa11.03□□□□□ -0.64
SNX13-204ENST00000444712 GYPEP15421 78 aa11.03□□□□□ -0.64
SNX13-204ENST00000444712 CDC42SE2Q9NRR3 84 aa11.03□□□□□ -0.64
SNX13-204ENST00000444712 A0A0J9YY99 117 aa11.02□□□□□ -0.64
SNX13-204ENST00000444712 C9orf118A6NHY6 69 aa11.02□□□□□ -0.64
SNX13-204ENST00000444712 SRSF9Q13242 221 aaKnown RBP eCLIP11.02□□□□□ -0.64
SNX13-204ENST00000444712 OXLD1Q5BKU9 147 aa11.02□□□□□ -0.64
SNX13-204ENST00000444712 ATP6V0E2Q8NHE4 81 aa11.02□□□□□ -0.64
SNX13-204ENST00000444712 SPART-AS1P0CW21 52 aa11.02□□□□□ -0.65
SNX13-204ENST00000444712 IGHV3-30-3P0DP02 117 aa11.02□□□□□ -0.65
SNX13-204ENST00000444712 VAMP3Q15836 100 aa11.02□□□□□ -0.65
SNX13-204ENST00000444712 Q6ZVH6 145 aa11.02□□□□□ -0.65
SNX13-204ENST00000444712 TENM1Q9UKZ4 2725 aa11.02□□□□□ -0.65
SNX13-204ENST00000444712 PAX4O43316 350 aa11.01□□□□□ -0.65
SNX13-204ENST00000444712 ATP5G1P05496 136 aa11.01□□□□□ -0.65
SNX13-204ENST00000444712 VSIG2Q96IQ7 327 aa11.01□□□□□ -0.65
SNX13-204ENST00000444712 UBE2V1Q13404 147 aa11□□□□□ -0.65
SNX13-204ENST00000444712 PRIMA1Q86XR5 153 aa11□□□□□ -0.65
SNX13-204ENST00000444712 NHP2Q9NX24 153 aaKnown RBP11□□□□□ -0.65
SNX13-204ENST00000444712 IGHV3-64A0A075B6Q5 118 aa10.99□□□□□ -0.65
SNX13-204ENST00000444712 CHCHD5Q9BSY4 110 aa10.99□□□□□ -0.65
SNX13-204ENST00000444712 TMEM238C9JI98 176 aa10.99□□□□□ -0.65
SNX13-204ENST00000444712 LINC00242Q5T6M2 205 aa10.99□□□□□ -0.65
SNX13-204ENST00000444712 DEFB4AO15263 64 aa10.98□□□□□ -0.65
SNX13-204ENST00000444712 KRTAP10-11P60412 298 aa10.98□□□□□ -0.65
SNX13-204ENST00000444712 CDKN2A-AS1Q9UH64 79 aa10.98□□□□□ -0.65
SNX13-204ENST00000444712 VWFP04275 2813 aa10.97□□□□□ -0.65
SNX13-204ENST00000444712 SPINK8P0C7L1 97 aa10.97□□□□□ -0.65
SNX13-204ENST00000444712 GAGE6Q13070 117 aa10.97□□□□□ -0.65
SNX13-204ENST00000444712 RAB37Q96AX2 223 aa10.97□□□□□ -0.65
SNX13-204ENST00000444712 TRAV26-1A0A087WT03 109 aa10.97□□□□□ -0.65
SNX13-204ENST00000444712 TRAV8-3A0A0A6YYJ7 113 aa10.97□□□□□ -0.65
SNX13-204ENST00000444712 TRAV13-1A0A0B4J241 112 aa10.97□□□□□ -0.65
SNX13-204ENST00000444712 A0A1B0GWB2 263 aa10.97□□□□□ -0.65
SNX13-204ENST00000444712 K7EP13 123 aa10.96□□□□□ -0.65
SNX13-204ENST00000444712 C12orf74Q32Q52 190 aa10.96□□□□□ -0.65
SNX13-204ENST00000444712 ZFAND6Q6FIF0 208 aa10.96□□□□□ -0.65
SNX13-204ENST00000444712 SH2D6Q7Z4S9 175 aa10.96□□□□□ -0.65
SNX13-204ENST00000444712 NDUFA12Q9UI09 145 aa10.96□□□□□ -0.65
SNX13-204ENST00000444712 H3BUT2 72 aa10.96□□□□□ -0.66
SNX13-204ENST00000444712 CELA1Q9UNI1 258 aa10.96□□□□□ -0.66
SNX13-204ENST00000444712 GTF2H5Q6ZYL4 71 aa10.95□□□□□ -0.66
SNX13-204ENST00000444712 A0A0J9YXY3 114 aa10.94□□□□□ -0.66
SNX13-204ENST00000444712 A0A1B0GUV1 79 aa10.94□□□□□ -0.66
SNX13-204ENST00000444712 IGHV3-30P01768 117 aa10.94□□□□□ -0.66
SNX13-204ENST00000444712 IGHV3-30-5P0DP03 117 aa10.94□□□□□ -0.66
SNX13-204ENST00000444712 COX6A2Q02221 97 aa10.94□□□□□ -0.66
SNX13-204ENST00000444712 IGLV5-39A0A0G2JS06 123 aa10.94□□□□□ -0.66
SNX13-204ENST00000444712 C10orf126Q8N4M7 172 aa10.94□□□□□ -0.66
SNX13-204ENST00000444712 A0A1W2PPM0 123 aa10.93□□□□□ -0.66
SNX13-204ENST00000444712 F5H768 121 aa10.93□□□□□ -0.66
SNX13-204ENST00000444712 FABP2P12104 132 aa10.93□□□□□ -0.66
SNX13-204ENST00000444712 SAMD5Q5TGI4 173 aa10.93□□□□□ -0.66
SNX13-204ENST00000444712 NDUFA1O15239 70 aa10.92□□□□□ -0.66
SNX13-204ENST00000444712 MRPL23Q16540 153 aaKnown RBP10.92□□□□□ -0.66
SNX13-204ENST00000444712 K7ERJ3 54 aa10.92□□□□□ -0.66
SNX13-204ENST00000444712 CCL25O15444 150 aa10.92□□□□□ -0.66
SNX13-204ENST00000444712 TIMM17BO60830 172 aa10.92□□□□□ -0.66
SNX13-204ENST00000444712 RPL24P83731 157 aaKnown RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms