RNA–Protein interactions for RNA: ENST00000444415.7

TRAF4-205, Transcript of TNF receptor associated factor 4, humanhuman

TSL 5 BASIC

Gene TRAF4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-205ENST00000444415 GAGE12HA6NDE8 117 aa14.14□□□□□ -0.15
TRAF4-205ENST00000444415 SMR3BP02814 79 aaPredicted RBP14.14□□□□□ -0.15
TRAF4-205ENST00000444415 C15orf56Q8N910 161 aa14.14□□□□□ -0.15
TRAF4-205ENST00000444415 CHCHD10Q8WYQ3 142 aaPredicted RBP14.14□□□□□ -0.15
TRAF4-205ENST00000444415 KIR2DL4Q99706 377 aa14.14□□□□□ -0.15
TRAF4-205ENST00000444415 SEC11CQ9BY50 192 aa14.14□□□□□ -0.15
TRAF4-205ENST00000444415 UBE2D4Q9Y2X8 147 aa14.14□□□□□ -0.15
TRAF4-205ENST00000444415 FCER1GP30273 86 aa14.13□□□□□ -0.15
TRAF4-205ENST00000444415 SLPIP03973 132 aa14.12□□□□□ -0.15
TRAF4-205ENST00000444415 MYCBP2O75592 4640 aa14.12□□□□□ -0.15
TRAF4-205ENST00000444415 LINC00959A0A1B0GUT2 108 aa14.12□□□□□ -0.15
TRAF4-205ENST00000444415 PHOX2AO14813 284 aa14.12□□□□□ -0.15
TRAF4-205ENST00000444415 PPBPP02775 128 aa14.12□□□□□ -0.15
TRAF4-205ENST00000444415 C10orf91Q5T1B1 145 aa14.12□□□□□ -0.15
TRAF4-205ENST00000444415 ORMDL3Q8N138 153 aa14.12□□□□□ -0.15
TRAF4-205ENST00000444415 FAM104AQ969W3 186 aa14.12□□□□□ -0.15
TRAF4-205ENST00000444415 TMEM101Q96IK0 257 aa14.12□□□□□ -0.15
TRAF4-205ENST00000444415 BTF3L4Q96K17 158 aa14.12□□□□□ -0.15
TRAF4-205ENST00000444415 SRRM2Q9UQ35 2752 aaKnown RBP14.11□□□□□ -0.15
TRAF4-205ENST00000444415 FOXI1Q12951 378 aa14.11□□□□□ -0.15
TRAF4-205ENST00000444415 TMEM136Q6ZRR5 245 aa14.11□□□□□ -0.15
TRAF4-205ENST00000444415 RPL39P62891 51 aaKnown RBP14.1□□□□□ -0.15
TRAF4-205ENST00000444415 DGAT2L7PQ6IED9 249 aa14.1□□□□□ -0.15
TRAF4-205ENST00000444415 ZNF664Q8N3J9 261 aa14.1□□□□□ -0.15
TRAF4-205ENST00000444415 PRELID3AQ96N28 172 aa14.1□□□□□ -0.15
TRAF4-205ENST00000444415 IMMP2LQ96T52 175 aa14.1□□□□□ -0.15
TRAF4-205ENST00000444415 CSDC2Q9Y534 153 aaKnown RBP14.1□□□□□ -0.15
TRAF4-205ENST00000444415 TCAPO15273 167 aa14.09□□□□□ -0.15
TRAF4-205ENST00000444415 RNASE13Q5GAN3 156 aaKnown RBP14.09□□□□□ -0.15
TRAF4-205ENST00000444415 Q5VSD8 79 aa14.09□□□□□ -0.15
TRAF4-205ENST00000444415 C9orf163Q8N9P6 203 aa14.09□□□□□ -0.15
TRAF4-205ENST00000444415 CLRN3Q8NCR9 226 aa14.09□□□□□ -0.15
TRAF4-205ENST00000444415 EPM2AB3EWF7 344 aa14.08□□□□□ -0.16
TRAF4-205ENST00000444415 CNBPP62633 177 aaKnown RBP14.08□□□□□ -0.16
TRAF4-205ENST00000444415 Q6ZUT4 128 aa14.08□□□□□ -0.16
TRAF4-205ENST00000444415 SCXQ7RTU7 201 aa14.08□□□□□ -0.16
TRAF4-205ENST00000444415 hDV102S1A0JD36 115 aa14.07□□□□□ -0.16
TRAF4-205ENST00000444415 CCL25O15444 150 aa14.07□□□□□ -0.16
TRAF4-205ENST00000444415 CTDSP1Q9GZU7 261 aa14.07□□□□□ -0.16
TRAF4-205ENST00000444415 PRSS47A8MTI9 375 aa14.06□□□□□ -0.16
TRAF4-205ENST00000444415 XCL1P47992 114 aa14.06□□□□□ -0.16
TRAF4-205ENST00000444415 TIMM21Q9BVV7 248 aa14.06□□□□□ -0.16
TRAF4-205ENST00000444415 CARHSP1Q9Y2V2 147 aaKnown RBP14.06□□□□□ -0.16
TRAF4-205ENST00000444415 PANO1I0J062 215 aa14.05□□□□□ -0.16
TRAF4-205ENST00000444415 CHAC1Q9BUX1 264 aa14.05□□□□□ -0.16
TRAF4-205ENST00000444415 HIGD2BQ4VC39 106 aa14.04□□□□□ -0.16
TRAF4-205ENST00000444415 PKHD1L1Q86WI1 4243 aa14.03□□□□□ -0.16
TRAF4-205ENST00000444415 SDIM1Q6ZPB5 146 aa14.03□□□□□ -0.16
TRAF4-205ENST00000444415 CIRBP-AS1Q8TBR5 109 aa14.03□□□□□ -0.16
TRAF4-205ENST00000444415 OPRPNQ99935 248 aaPredicted RBP14.03□□□□□ -0.16
TRAF4-205ENST00000444415 LAMTOR2Q9Y2Q5 125 aa14.03□□□□□ -0.16
TRAF4-205ENST00000444415 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.02□□□□□ -0.16
TRAF4-205ENST00000444415 GVQW2A0A096LPI5 108 aaPredicted RBP14.01□□□□□ -0.17
TRAF4-205ENST00000444415 LOC389332A0A1B0GUA5 103 aa14.01□□□□□ -0.17
TRAF4-205ENST00000444415 CD164L2Q6UWJ8 174 aa14.01□□□□□ -0.17
TRAF4-205ENST00000444415 TRAV9-1A0A075B6T8 112 aa14□□□□□ -0.17
TRAF4-205ENST00000444415 SS18Q15532 418 aa14□□□□□ -0.17
TRAF4-205ENST00000444415 TMEM18Q96B42 140 aa14□□□□□ -0.17
TRAF4-205ENST00000444415 MAP1LC3AQ9H492 121 aa13.99□□□□□ -0.17
TRAF4-205ENST00000444415 SPANXA1Q9NS26 97 aa13.99□□□□□ -0.17
TRAF4-205ENST00000444415 FLG2Q5D862 2391 aaPredicted RBP13.99□□□□□ -0.17
TRAF4-205ENST00000444415 KIAA1644Q3SXP7 199 aa13.99□□□□□ -0.17
TRAF4-205ENST00000444415 CFAP161Q6P656 301 aa13.99□□□□□ -0.17
TRAF4-205ENST00000444415 TRAV13-1A0A0B4J241 112 aa13.98□□□□□ -0.17
TRAF4-205ENST00000444415 SMAGPQ0VAQ4 97 aa13.98□□□□□ -0.17
TRAF4-205ENST00000444415 Q8N8P6 123 aa13.98□□□□□ -0.17
TRAF4-205ENST00000444415 LINC00526Q96FQ7 95 aa13.98□□□□□ -0.17
TRAF4-205ENST00000444415 C1orf196B1AJZ1 125 aa13.97□□□□□ -0.17
TRAF4-205ENST00000444415 MRPS36P82909 103 aaKnown RBP13.97□□□□□ -0.17
TRAF4-205ENST00000444415 RHEBQ15382 184 aa13.97□□□□□ -0.17
TRAF4-205ENST00000444415 LINC00528Q8N1L1 170 aa13.97□□□□□ -0.17
TRAF4-205ENST00000444415 AP5S1Q9NUS5 200 aa13.97□□□□□ -0.17
TRAF4-205ENST00000444415 RAB5AP20339 215 aa13.96□□□□□ -0.17
TRAF4-205ENST00000444415 CIRBPQ14011 172 aaKnown RBP13.96□□□□□ -0.17
TRAF4-205ENST00000444415 RPS10P5Q9NQ39 176 aa13.95□□□□□ -0.18
TRAF4-205ENST00000444415 IGHV1-58A0A0C4DH39 117 aa13.94□□□□□ -0.18
TRAF4-205ENST00000444415 FAM229AH3BQW9 127 aa13.94□□□□□ -0.18
TRAF4-205ENST00000444415 KRTAP10-4P60372 401 aaPredicted RBP13.94□□□□□ -0.18
TRAF4-205ENST00000444415 IGLV4-3A0A075B6K6 122 aa13.93□□□□□ -0.18
TRAF4-205ENST00000444415 IGHV3-64A0A075B6Q5 118 aa13.93□□□□□ -0.18
TRAF4-205ENST00000444415 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.93□□□□□ -0.18
TRAF4-205ENST00000444415 CHTF8P0CG12 524 aa13.93□□□□□ -0.18
TRAF4-205ENST00000444415 IFI27P40305 119 aaPredicted RBP13.93□□□□□ -0.18
TRAF4-205ENST00000444415 GNB1LQ9BYB4 327 aa13.93□□□□□ -0.18
TRAF4-205ENST00000444415 PYGO1Q9Y3Y4 419 aa13.93□□□□□ -0.18
TRAF4-205ENST00000444415 HERC1Q15751 4861 aa13.93□□□□□ -0.18
TRAF4-205ENST00000444415 S100PP25815 95 aa13.93□□□□□ -0.18
TRAF4-205ENST00000444415 LRP1Q07954 4544 aaKnown RBP13.92□□□□□ -0.18
TRAF4-205ENST00000444415 FAT3Q8TDW7 4589 aa13.92□□□□□ -0.18
TRAF4-205ENST00000444415 COX7A2LO14548 114 aa13.91□□□□□ -0.18
TRAF4-205ENST00000444415 INAFM2P0DMQ5 153 aa13.91□□□□□ -0.18
TRAF4-205ENST00000444415 C2orf66Q6UXQ4 117 aa13.91□□□□□ -0.18
TRAF4-205ENST00000444415 C5orf38Q86SI9 138 aa13.91□□□□□ -0.18
TRAF4-205ENST00000444415 IGHV3OR16-9A0A0B4J2B5 98 aa13.9□□□□□ -0.18
TRAF4-205ENST00000444415 APOC3P02656 99 aa13.9□□□□□ -0.18
TRAF4-205ENST00000444415 PRSS3P2Q8NHM4 247 aa13.9□□□□□ -0.18
TRAF4-205ENST00000444415 IFITM10A6NMD0 228 aa13.89□□□□□ -0.19
TRAF4-205ENST00000444415 COX6A2Q02221 97 aa13.89□□□□□ -0.19
TRAF4-205ENST00000444415 ZC2HC1BQ5TFG8 222 aa13.89□□□□□ -0.19
TRAF4-205ENST00000444415 LINC00173Q6ZV60 143 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms