RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 NCR2O95944 276 aa5.96□□□□□ -1.46
USP6NL-203ENST00000443016 GATA1P15976 413 aaPredicted RBP5.96□□□□□ -1.46
USP6NL-203ENST00000443016 RAB5BP61020 215 aa5.96□□□□□ -1.46
USP6NL-203ENST00000443016 SLC25A29Q8N8R3 303 aa5.96□□□□□ -1.46
USP6NL-203ENST00000443016 TRAV26-2A0A0B4J265 109 aa5.95□□□□□ -1.46
USP6NL-203ENST00000443016 CDK2AP2O75956 126 aa5.95□□□□□ -1.46
USP6NL-203ENST00000443016 KRTAP10-2P60368 255 aa5.95□□□□□ -1.46
USP6NL-203ENST00000443016 KIAA1644Q3SXP7 199 aa5.95□□□□□ -1.46
USP6NL-203ENST00000443016 LRP1BQ9NZR2 4599 aa5.95□□□□□ -1.46
USP6NL-203ENST00000443016 IGHV3-38A0A0C4DH36 116 aa5.94□□□□□ -1.46
USP6NL-203ENST00000443016 C10orf126Q8N4M7 172 aa5.94□□□□□ -1.46
USP6NL-203ENST00000443016 DNAJC30Q96LL9 226 aa5.94□□□□□ -1.46
USP6NL-203ENST00000443016 MAP1LC3AQ9H492 121 aa5.94□□□□□ -1.46
USP6NL-203ENST00000443016 TRAV8-6A0A0B4J262 113 aa5.94□□□□□ -1.46
USP6NL-203ENST00000443016 SMKR1H3BMG3 65 aa5.94□□□□□ -1.46
USP6NL-203ENST00000443016 M0QY20 66 aa5.94□□□□□ -1.46
USP6NL-203ENST00000443016 DNAH10OSP0CZ25 163 aa5.94□□□□□ -1.46
USP6NL-203ENST00000443016 RPL36AP83881 106 aaKnown RBP5.94□□□□□ -1.46
USP6NL-203ENST00000443016 Q6ZRN7 208 aaPredicted RBP5.94□□□□□ -1.46
USP6NL-203ENST00000443016 MAPKAPK5-AS1Q8N8E1 139 aa5.94□□□□□ -1.46
USP6NL-203ENST00000443016 RPL36ALQ969Q0 106 aaKnown RBP5.94□□□□□ -1.46
USP6NL-203ENST00000443016 ST20Q9HBF5 79 aa5.94□□□□□ -1.46
USP6NL-203ENST00000443016 NIT2Q9NQR4 276 aa5.94□□□□□ -1.46
USP6NL-203ENST00000443016 TCAPO15273 167 aa5.93□□□□□ -1.46
USP6NL-203ENST00000443016 C20orf78Q9BR46 151 aa5.93□□□□□ -1.46
USP6NL-203ENST00000443016 PSCAO43653 123 aa5.93□□□□□ -1.46
USP6NL-203ENST00000443016 NPYP01303 97 aa5.93□□□□□ -1.46
USP6NL-203ENST00000443016 TRBV6-5A0A0K0K1A5 114 aa5.92□□□□□ -1.46
USP6NL-203ENST00000443016 PDZD11Q5EBL8 140 aa5.92□□□□□ -1.46
USP6NL-203ENST00000443016 ATP6V0E2Q8NHE4 81 aa5.92□□□□□ -1.46
USP6NL-203ENST00000443016 RPL39LQ96EH5 51 aaKnown RBP5.92□□□□□ -1.46
USP6NL-203ENST00000443016 DNAH5Q8TE73 4624 aa5.92□□□□□ -1.46
USP6NL-203ENST00000443016 NRACQ8N912 160 aa5.92□□□□□ -1.46
USP6NL-203ENST00000443016 NXT2Q9NPJ8 142 aaKnown RBP5.92□□□□□ -1.46
USP6NL-203ENST00000443016 HSPG2P98160 4391 aa5.92□□□□□ -1.46
USP6NL-203ENST00000443016 ABCA13Q86UQ4 5058 aa5.92□□□□□ -1.46
USP6NL-203ENST00000443016 TRBV7-3A0A075B6L6 115 aa5.91□□□□□ -1.46
USP6NL-203ENST00000443016 A0A1B0GV72 72 aa5.91□□□□□ -1.46
USP6NL-203ENST00000443016 RPL32P62910 135 aaKnown RBP5.91□□□□□ -1.46
USP6NL-203ENST00000443016 Q6ZSN1 163 aa5.91□□□□□ -1.46
USP6NL-203ENST00000443016 BAGE3Q86Y29 109 aa5.91□□□□□ -1.46
USP6NL-203ENST00000443016 NEXN-AS1Q8NBZ9 246 aa5.91□□□□□ -1.46
USP6NL-203ENST00000443016 SMIM2Q9BVW6 85 aa5.91□□□□□ -1.46
USP6NL-203ENST00000443016 GTSF1LQ9H1H1 148 aa5.91□□□□□ -1.46
USP6NL-203ENST00000443016 A0A087WTM6 91 aa5.91□□□□□ -1.46
USP6NL-203ENST00000443016 TINCRA0A1B0GVN0 87 aa5.91□□□□□ -1.46
USP6NL-203ENST00000443016 GAGE12JA6NER3 117 aa5.91□□□□□ -1.46
USP6NL-203ENST00000443016 SDHAF1A6NFY7 115 aa5.91□□□□□ -1.46
USP6NL-203ENST00000443016 FUSP35637 526 aaKnown RBP eCLIP5.91□□□□□ -1.46
USP6NL-203ENST00000443016 GAGE1Q13065 139 aa5.91□□□□□ -1.46
USP6NL-203ENST00000443016 GAGE4Q13068 117 aa5.91□□□□□ -1.46
USP6NL-203ENST00000443016 GAGE5Q13069 117 aa5.91□□□□□ -1.46
USP6NL-203ENST00000443016 LINC01556Q5JQF7 62 aa5.91□□□□□ -1.46
USP6NL-203ENST00000443016 FA2HQ7L5A8 372 aa5.91□□□□□ -1.46
USP6NL-203ENST00000443016 PRSS3P2Q8NHM4 247 aa5.91□□□□□ -1.46
USP6NL-203ENST00000443016 C18orf32Q8TCD1 76 aa5.91□□□□□ -1.46
USP6NL-203ENST00000443016 KIR2DL4Q99706 377 aa5.91□□□□□ -1.46
USP6NL-203ENST00000443016 Q9HAA7 133 aa5.91□□□□□ -1.46
USP6NL-203ENST00000443016 HIST1H2BKO60814 126 aa5.9□□□□□ -1.46
USP6NL-203ENST00000443016 IGHV3-30P01768 117 aa5.9□□□□□ -1.46
USP6NL-203ENST00000443016 IGHV3-33P01772 117 aa5.9□□□□□ -1.46
USP6NL-203ENST00000443016 HIST1H2BJP06899 126 aa5.9□□□□□ -1.46
USP6NL-203ENST00000443016 IGHV3-30-3P0DP02 117 aa5.9□□□□□ -1.46
USP6NL-203ENST00000443016 IGHV3-30-5P0DP03 117 aa5.9□□□□□ -1.46
USP6NL-203ENST00000443016 HIST1H2BOP23527 126 aa5.9□□□□□ -1.46
USP6NL-203ENST00000443016 HIST1H2BBP33778 126 aa5.9□□□□□ -1.46
USP6NL-203ENST00000443016 HIST1H2BDP58876 126 aa5.9□□□□□ -1.46
USP6NL-203ENST00000443016 HIST1H2BCP62807 126 aa5.9□□□□□ -1.46
USP6NL-203ENST00000443016 HIST2H2BEQ16778 126 aa5.9□□□□□ -1.46
USP6NL-203ENST00000443016 C4orf26Q17RF5 130 aa5.9□□□□□ -1.46
USP6NL-203ENST00000443016 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.9□□□□□ -1.46
USP6NL-203ENST00000443016 LELP1Q5T871 98 aa5.9□□□□□ -1.46
USP6NL-203ENST00000443016 DAZ4Q86SG3 579 aaKnown RBP5.9□□□□□ -1.46
USP6NL-203ENST00000443016 HIST1H2BHQ93079 126 aa5.9□□□□□ -1.46
USP6NL-203ENST00000443016 HIST1H2BNQ99877 126 aa5.9□□□□□ -1.46
USP6NL-203ENST00000443016 HIST1H2BMQ99879 126 aa5.9□□□□□ -1.46
USP6NL-203ENST00000443016 TMEM70Q9BUB7 260 aa5.9□□□□□ -1.46
USP6NL-203ENST00000443016 DAZ3Q9NR90 486 aaKnown RBP5.9□□□□□ -1.46
USP6NL-203ENST00000443016 LOC389332A0A1B0GUA5 103 aa5.9□□□□□ -1.47
USP6NL-203ENST00000443016 GAS8-AS1O95177 125 aa5.9□□□□□ -1.47
USP6NL-203ENST00000443016 NPSP0C0P6 89 aa5.9□□□□□ -1.47
USP6NL-203ENST00000443016 Q0VG73 95 aa5.9□□□□□ -1.47
USP6NL-203ENST00000443016 TMEM97Q5BJF2 176 aa5.9□□□□□ -1.47
USP6NL-203ENST00000443016 KRTAP4-5Q9BYR2 181 aa5.9□□□□□ -1.47
USP6NL-203ENST00000443016 I3L3M4 83 aa5.89□□□□□ -1.47
USP6NL-203ENST00000443016 K7EMI3 77 aa5.89□□□□□ -1.47
USP6NL-203ENST00000443016 FCER1GP30273 86 aa5.89□□□□□ -1.47
USP6NL-203ENST00000443016 Q8N8P6 123 aa5.89□□□□□ -1.47
USP6NL-203ENST00000443016 TRBV27A0A0K0K1C4 114 aa5.89□□□□□ -1.47
USP6NL-203ENST00000443016 UBE2D3P61077 147 aa5.89□□□□□ -1.47
USP6NL-203ENST00000443016 UBE2D2P62837 147 aa5.89□□□□□ -1.47
USP6NL-203ENST00000443016 IQCJQ1A5X6 159 aa5.89□□□□□ -1.47
USP6NL-203ENST00000443016 SMIM20Q8N5G0 67 aa5.89□□□□□ -1.47
USP6NL-203ENST00000443016 Q9UF83 564 aa5.89□□□□□ -1.47
USP6NL-203ENST00000443016 APOBP04114 4563 aaKnown RBP5.89□□□□□ -1.47
USP6NL-203ENST00000443016 IBA57-AS1B1ANH7 110 aa5.88□□□□□ -1.47
USP6NL-203ENST00000443016 POLR2KP53803 58 aaKnown RBP5.88□□□□□ -1.47
USP6NL-203ENST00000443016 CHCHD1Q96BP2 118 aaKnown RBP5.88□□□□□ -1.47
USP6NL-203ENST00000443016 LINC00694P0DN24 101 aa5.88□□□□□ -1.47
USP6NL-203ENST00000443016 IFI27P40305 119 aaPredicted RBP5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms