RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 PTPN13Q12923 2485 aa11.95□□□□□ -0.5
SEMA3B-207ENST00000441915 TRAV4A0A0B4J268 109 aa11.95□□□□□ -0.5
SEMA3B-207ENST00000441915 TRBV30A0A0K0K1B3 111 aa11.95□□□□□ -0.5
SEMA3B-207ENST00000441915 ADAMTSL4-AS1Q5T5F5 129 aa11.95□□□□□ -0.5
SEMA3B-207ENST00000441915 LRRK2Q5S007 2527 aa11.94□□□□□ -0.5
SEMA3B-207ENST00000441915 A8MZ25 164 aa11.94□□□□□ -0.5
SEMA3B-207ENST00000441915 TEX15Q9BXT5 2789 aa11.94□□□□□ -0.5
SEMA3B-207ENST00000441915 MIAQ16674 131 aa11.94□□□□□ -0.5
SEMA3B-207ENST00000441915 RS1O15537 224 aa11.93□□□□□ -0.5
SEMA3B-207ENST00000441915 DGAT2L7PQ6IED9 249 aa11.93□□□□□ -0.5
SEMA3B-207ENST00000441915 NAV2Q8IVL1 2488 aa11.92□□□□□ -0.5
SEMA3B-207ENST00000441915 TRIAP1O43715 76 aa11.92□□□□□ -0.5
SEMA3B-207ENST00000441915 Q6Q795 121 aa11.92□□□□□ -0.5
SEMA3B-207ENST00000441915 CRLF1O75462 422 aa11.92□□□□□ -0.5
SEMA3B-207ENST00000441915 LINC01620Q4KN68 170 aa11.92□□□□□ -0.5
SEMA3B-207ENST00000441915 XCL2Q9UBD3 114 aa11.91□□□□□ -0.5
SEMA3B-207ENST00000441915 CDKN2A-AS1Q9UH64 79 aa11.91□□□□□ -0.5
SEMA3B-207ENST00000441915 NPC2P61916 151 aa11.91□□□□□ -0.5
SEMA3B-207ENST00000441915 YAE1D1Q9NRH1 226 aa11.91□□□□□ -0.5
SEMA3B-207ENST00000441915 KRTAP10-9P60411 292 aa11.9□□□□□ -0.5
SEMA3B-207ENST00000441915 DEFB113Q30KQ7 82 aa11.9□□□□□ -0.5
SEMA3B-207ENST00000441915 PRB1P04280 392 aa11.9□□□□□ -0.5
SEMA3B-207ENST00000441915 COX6CP09669 75 aa11.9□□□□□ -0.5
SEMA3B-207ENST00000441915 TIRAPP58753 221 aa11.9□□□□□ -0.5
SEMA3B-207ENST00000441915 ICOSQ9Y6W8 199 aa11.9□□□□□ -0.5
SEMA3B-207ENST00000441915 ZNF462Q96JM2 2506 aa11.9□□□□□ -0.5
SEMA3B-207ENST00000441915 IGHV3OR16-12A0A075B7B8 117 aa11.89□□□□□ -0.51
SEMA3B-207ENST00000441915 HIST2H2BDQ6DRA6 164 aa11.89□□□□□ -0.51
SEMA3B-207ENST00000441915 STHQ8IWL8 128 aa11.89□□□□□ -0.51
SEMA3B-207ENST00000441915 ABCA12Q86UK0 2595 aa11.89□□□□□ -0.51
SEMA3B-207ENST00000441915 IGLV5-45A0A087WSX0 123 aa11.88□□□□□ -0.51
SEMA3B-207ENST00000441915 TIMM17BO60830 172 aa11.88□□□□□ -0.51
SEMA3B-207ENST00000441915 ODF3L2Q3SX64 289 aa11.88□□□□□ -0.51
SEMA3B-207ENST00000441915 TRBV10-2A0A0K0K1G8 114 aa11.88□□□□□ -0.51
SEMA3B-207ENST00000441915 NTN5Q8WTR8 489 aaPredicted RBP11.88□□□□□ -0.51
SEMA3B-207ENST00000441915 Q96MF0 132 aa11.88□□□□□ -0.51
SEMA3B-207ENST00000441915 ZFYVE26Q68DK2 2539 aa11.88□□□□□ -0.51
SEMA3B-207ENST00000441915 TMEM101Q96IK0 257 aa11.88□□□□□ -0.51
SEMA3B-207ENST00000441915 TRGV1A0A0A0MS02 117 aa11.87□□□□□ -0.51
SEMA3B-207ENST00000441915 NDUFA1O15239 70 aa11.87□□□□□ -0.51
SEMA3B-207ENST00000441915 HERVK_113P63121 156 aa11.87□□□□□ -0.51
SEMA3B-207ENST00000441915 CIRBPQ14011 172 aaKnown RBP11.87□□□□□ -0.51
SEMA3B-207ENST00000441915 LRRC75A-AS1Q8N1F1 130 aa11.87□□□□□ -0.51
SEMA3B-207ENST00000441915 AKAP9Q99996 3911 aa11.86□□□□□ -0.51
SEMA3B-207ENST00000441915 TRAV25A0A0B4J276 109 aa11.86□□□□□ -0.51
SEMA3B-207ENST00000441915 C1orf158Q8N1D5 194 aa11.86□□□□□ -0.51
SEMA3B-207ENST00000441915 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.86□□□□□ -0.51
SEMA3B-207ENST00000441915 LINC01600Q96MT4 127 aa11.86□□□□□ -0.51
SEMA3B-207ENST00000441915 CUBNO60494 3623 aa11.86□□□□□ -0.51
SEMA3B-207ENST00000441915 ZNF469Q96JG9 3925 aaPredicted RBP11.86□□□□□ -0.51
SEMA3B-207ENST00000441915 MEIG1Q5JSS6 88 aa11.85□□□□□ -0.51
SEMA3B-207ENST00000441915 Q6ZSV7 163 aa11.85□□□□□ -0.51
SEMA3B-207ENST00000441915 DAND5Q8N907 189 aa11.85□□□□□ -0.51
SEMA3B-207ENST00000441915 CHD6Q8TD26 2715 aa11.85□□□□□ -0.51
SEMA3B-207ENST00000441915 TLN2Q9Y4G6 2542 aa11.85□□□□□ -0.51
SEMA3B-207ENST00000441915 RPL36AP83881 106 aaKnown RBP11.85□□□□□ -0.51
SEMA3B-207ENST00000441915 COX6A2Q02221 97 aa11.85□□□□□ -0.51
SEMA3B-207ENST00000441915 RPL36ALQ969Q0 106 aaKnown RBP11.85□□□□□ -0.51
SEMA3B-207ENST00000441915 WNK1Q9H4A3 2382 aa11.84□□□□□ -0.51
SEMA3B-207ENST00000441915 LINC00242Q5T6M2 205 aa11.84□□□□□ -0.51
SEMA3B-207ENST00000441915 TMEM86BQ8N661 226 aa11.84□□□□□ -0.51
SEMA3B-207ENST00000441915 IL17DQ8TAD2 202 aa11.84□□□□□ -0.51
SEMA3B-207ENST00000441915 TRBV10-1A0A0K0K1A3 114 aa11.83□□□□□ -0.52
SEMA3B-207ENST00000441915 TEX49A0A1B0GTD5 131 aa11.83□□□□□ -0.52
SEMA3B-207ENST00000441915 RPL13AP40429 203 aaKnown RBP11.83□□□□□ -0.52
SEMA3B-207ENST00000441915 LINC00694P0DN24 101 aa11.83□□□□□ -0.52
SEMA3B-207ENST00000441915 C2orf82Q6UX34 121 aa11.83□□□□□ -0.52
SEMA3B-207ENST00000441915 C15orf53Q8NAA6 179 aa11.83□□□□□ -0.52
SEMA3B-207ENST00000441915 Q9H8V8 135 aa11.83□□□□□ -0.52
SEMA3B-207ENST00000441915 IGLV5-39A0A0G2JS06 123 aa11.82□□□□□ -0.52
SEMA3B-207ENST00000441915 K7EQD1 137 aa11.82□□□□□ -0.52
SEMA3B-207ENST00000441915 DAZ2Q13117 558 aaKnown RBP11.82□□□□□ -0.52
SEMA3B-207ENST00000441915 DAZ4Q86SG3 579 aaKnown RBP11.82□□□□□ -0.52
SEMA3B-207ENST00000441915 C11orf44Q8N8P7 122 aa11.82□□□□□ -0.52
SEMA3B-207ENST00000441915 DAZ3Q9NR90 486 aaKnown RBP11.82□□□□□ -0.52
SEMA3B-207ENST00000441915 CSDC2Q9Y534 153 aaKnown RBP11.82□□□□□ -0.52
SEMA3B-207ENST00000441915 TRAV8-4A0A0B4J246 113 aa11.82□□□□□ -0.52
SEMA3B-207ENST00000441915 A0A1W2PRX2 142 aa11.81□□□□□ -0.52
SEMA3B-207ENST00000441915 UBE2WQ96B02 151 aa11.81□□□□□ -0.52
SEMA3B-207ENST00000441915 EPG5Q9HCE0 2579 aa11.81□□□□□ -0.52
SEMA3B-207ENST00000441915 UBR5O95071 2799 aaPredicted RBP11.81□□□□□ -0.52
SEMA3B-207ENST00000441915 H7C423 109 aa11.81□□□□□ -0.52
SEMA3B-207ENST00000441915 Q6ZTI0 123 aa11.81□□□□□ -0.52
SEMA3B-207ENST00000441915 TRAV13-1A0A0B4J241 112 aa11.8□□□□□ -0.52
SEMA3B-207ENST00000441915 H3BT86 120 aa11.8□□□□□ -0.52
SEMA3B-207ENST00000441915 FAM19A3Q7Z5A8 133 aa11.8□□□□□ -0.52
SEMA3B-207ENST00000441915 CLEC2BQ92478 149 aa11.8□□□□□ -0.52
SEMA3B-207ENST00000441915 CCL24O00175 119 aa11.8□□□□□ -0.52
SEMA3B-207ENST00000441915 LST1O00453 97 aa11.8□□□□□ -0.52
SEMA3B-207ENST00000441915 BBC3Q96PG8 261 aaPredicted RBP11.8□□□□□ -0.52
SEMA3B-207ENST00000441915 TMEM126AQ9H061 195 aa11.8□□□□□ -0.52
SEMA3B-207ENST00000441915 NDUFA7O95182 113 aa11.8□□□□□ -0.52
SEMA3B-207ENST00000441915 NTM-AS1Q6ZSK4 140 aa11.8□□□□□ -0.52
SEMA3B-207ENST00000441915 LINC00308Q8TCZ7 52 aa11.8□□□□□ -0.52
SEMA3B-207ENST00000441915 ZNF625Q96I27 306 aaPredicted RBP11.8□□□□□ -0.52
SEMA3B-207ENST00000441915 SONP18583 2426 aaKnown RBP11.79□□□□□ -0.52
SEMA3B-207ENST00000441915 SMIM1B2RUZ4 78 aa11.79□□□□□ -0.52
SEMA3B-207ENST00000441915 COPS9Q8WXC6 57 aa11.79□□□□□ -0.52
SEMA3B-207ENST00000441915 NOTCH3Q9UM47 2321 aa11.78□□□□□ -0.52
SEMA3B-207ENST00000441915 USP24Q9UPU5 2620 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms