RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 KDM5AP29375 1690 aaKnown RBP-0.15□□□□□ -2.43
PFDN4-202ENST00000441080 COL4A6Q14031 1691 aa-0.15□□□□□ -2.43
PFDN4-202ENST00000441080 HELZP42694 1942 aaKnown RBP-0.15□□□□□ -2.43
PFDN4-202ENST00000441080 SONP18583 2426 aaKnown RBP-0.15□□□□□ -2.43
PFDN4-202ENST00000441080 USP9XQ93008 2570 aaPredicted RBP-0.15□□□□□ -2.43
PFDN4-202ENST00000441080 MAP2P11137 1827 aaKnown RBP-0.15□□□□□ -2.43
PFDN4-202ENST00000441080 CADP27708 2225 aa-0.15□□□□□ -2.43
PFDN4-202ENST00000441080 MYO7AQ13402 2215 aa-0.15□□□□□ -2.43
PFDN4-202ENST00000441080 MUC2Q02817 5179 aa-0.16□□□□□ -2.43
PFDN4-202ENST00000441080 FMN2Q9NZ56 1722 aa-0.16□□□□□ -2.43
PFDN4-202ENST00000441080 TEP1Q99973 2627 aaKnown RBP-0.16□□□□□ -2.43
PFDN4-202ENST00000441080 GOLGA3Q08378 1498 aa-0.16□□□□□ -2.43
PFDN4-202ENST00000441080 CCDC141Q6ZP82 1450 aa-0.16□□□□□ -2.43
PFDN4-202ENST00000441080 MAGI2Q86UL8 1455 aa-0.16□□□□□ -2.43
PFDN4-202ENST00000441080 F8P00451 2351 aa-0.16□□□□□ -2.43
PFDN4-202ENST00000441080 NF1P21359 2839 aa-0.16□□□□□ -2.43
PFDN4-202ENST00000441080 LAMA2P24043 3122 aaKnown RBP-0.16□□□□□ -2.43
PFDN4-202ENST00000441080 PIGBOS1A0A0B4J2F0 54 aa-0.16□□□□□ -2.44
PFDN4-202ENST00000441080 TRBV7-7A0A0K0K1E9 115 aa-0.16□□□□□ -2.44
PFDN4-202ENST00000441080 LYNX1G3V0Z9 82 aa-0.16□□□□□ -2.44
PFDN4-202ENST00000441080 H0YJX3 145 aa-0.16□□□□□ -2.44
PFDN4-202ENST00000441080 H3BQF6 201 aa-0.16□□□□□ -2.44
PFDN4-202ENST00000441080 M0QZ58 72 aa-0.16□□□□□ -2.44
PFDN4-202ENST00000441080 CCL22O00626 93 aa-0.16□□□□□ -2.44
PFDN4-202ENST00000441080 NDUFA3O95167 84 aa-0.16□□□□□ -2.44
PFDN4-202ENST00000441080 IL5P05113 134 aa-0.16□□□□□ -2.44
PFDN4-202ENST00000441080 ACYP1P07311 99 aa-0.16□□□□□ -2.44
PFDN4-202ENST00000441080 TNP1P09430 55 aa-0.16□□□□□ -2.44
PFDN4-202ENST00000441080 SLC25A6P12236 298 aa-0.16□□□□□ -2.44
PFDN4-202ENST00000441080 COX7BP24311 80 aa-0.16□□□□□ -2.44
PFDN4-202ENST00000441080 FCER1GP30273 86 aa-0.16□□□□□ -2.44
PFDN4-202ENST00000441080 ASIPP42127 132 aa-0.16□□□□□ -2.44
PFDN4-202ENST00000441080 LINC00158P58513 81 aa-0.16□□□□□ -2.44
PFDN4-202ENST00000441080 RRAS2P62070 204 aaPredicted RBP-0.16□□□□□ -2.44
PFDN4-202ENST00000441080 UBE2G1P62253 170 aa-0.16□□□□□ -2.44
PFDN4-202ENST00000441080 NMSQ5H8A3 153 aa-0.16□□□□□ -2.44
PFDN4-202ENST00000441080 C9orf153Q5TBE3 101 aa-0.16□□□□□ -2.44
PFDN4-202ENST00000441080 Q6AWC8 147 aa-0.16□□□□□ -2.44
PFDN4-202ENST00000441080 Q6ZUT4 128 aa-0.16□□□□□ -2.44
PFDN4-202ENST00000441080 BAGE2Q86Y30 109 aa-0.16□□□□□ -2.44
PFDN4-202ENST00000441080 DEFB107AQ8IZN7 70 aa-0.16□□□□□ -2.44
PFDN4-202ENST00000441080 TCTE3Q8IZS6 198 aa-0.16□□□□□ -2.44
PFDN4-202ENST00000441080 C10orf82Q8WW14 230 aa-0.16□□□□□ -2.44
PFDN4-202ENST00000441080 MGST2Q99735 147 aa-0.16□□□□□ -2.44
PFDN4-202ENST00000441080 MANBALQ9NQG1 85 aa-0.16□□□□□ -2.44
PFDN4-202ENST00000441080 HIGD1BQ9P298 99 aa-0.16□□□□□ -2.44
PFDN4-202ENST00000441080 UQCR10Q9UDW1 63 aa-0.16□□□□□ -2.44
PFDN4-202ENST00000441080 LINC00312Q9Y6C7 94 aa-0.16□□□□□ -2.44
PFDN4-202ENST00000441080 ARL2-SNX15V9GYD0 113 aa-0.16□□□□□ -2.44
PFDN4-202ENST00000441080 SVEP1Q4LDE5 3571 aa-0.16□□□□□ -2.44
PFDN4-202ENST00000441080 PCLOQ9Y6V0 5065 aa-0.16□□□□□ -2.44
PFDN4-202ENST00000441080 USH2AO75445 5202 aa-0.16□□□□□ -2.44
PFDN4-202ENST00000441080 NSD3Q9BZ95 1437 aa-0.16□□□□□ -2.44
PFDN4-202ENST00000441080 WNK1Q9H4A3 2382 aa-0.16□□□□□ -2.44
PFDN4-202ENST00000441080 SETBP1Q9Y6X0 1596 aa-0.16□□□□□ -2.44
PFDN4-202ENST00000441080 MYO7BQ6PIF6 2116 aa-0.16□□□□□ -2.44
PFDN4-202ENST00000441080 DOPEY2Q9Y3R5 2298 aa-0.16□□□□□ -2.44
PFDN4-202ENST00000441080 NCOR1O75376 2440 aa-0.16□□□□□ -2.44
PFDN4-202ENST00000441080 PLXNA2O75051 1894 aa-0.16□□□□□ -2.44
PFDN4-202ENST00000441080 ATP10BO94823 1461 aa-0.16□□□□□ -2.44
PFDN4-202ENST00000441080 ATP7BP35670 1465 aa-0.16□□□□□ -2.44
PFDN4-202ENST00000441080 APC2O95996 2303 aa-0.16□□□□□ -2.44
PFDN4-202ENST00000441080 PCNX1Q96RV3 2341 aa-0.16□□□□□ -2.44
PFDN4-202ENST00000441080 PAPPAQ13219 1627 aa-0.16□□□□□ -2.44
PFDN4-202ENST00000441080 ATRQ13535 2644 aa-0.17□□□□□ -2.44
PFDN4-202ENST00000441080 SIPA1L3O60292 1781 aaPredicted RBP-0.17□□□□□ -2.44
PFDN4-202ENST00000441080 AKAP11Q9UKA4 1901 aa-0.17□□□□□ -2.44
PFDN4-202ENST00000441080 ASXL3Q9C0F0 2248 aa-0.17□□□□□ -2.44
PFDN4-202ENST00000441080 PHIPQ8WWQ0 1821 aa-0.17□□□□□ -2.44
PFDN4-202ENST00000441080 PKDREJQ9NTG1 2253 aa-0.17□□□□□ -2.44
PFDN4-202ENST00000441080 ZNF292O60281 2723 aa-0.17□□□□□ -2.44
PFDN4-202ENST00000441080 TRBV7-3A0A075B6L6 115 aa-0.17□□□□□ -2.44
PFDN4-202ENST00000441080 A0A0G2JND7 137 aa-0.17□□□□□ -2.44
PFDN4-202ENST00000441080 A0A1B0GX51 115 aa-0.17□□□□□ -2.44
PFDN4-202ENST00000441080 G3V318 75 aa-0.17□□□□□ -2.44
PFDN4-202ENST00000441080 J3QLW9 94 aa-0.17□□□□□ -2.44
PFDN4-202ENST00000441080 K7EP13 123 aa-0.17□□□□□ -2.44
PFDN4-202ENST00000441080 UQCR11O14957 56 aa-0.17□□□□□ -2.44
PFDN4-202ENST00000441080 ABCC5O15440 1437 aa-0.17□□□□□ -2.44
PFDN4-202ENST00000441080 LEPROTL1O95214 131 aa-0.17□□□□□ -2.44
PFDN4-202ENST00000441080 SFT2D2O95562 160 aa-0.17□□□□□ -2.44
PFDN4-202ENST00000441080 IFI6P09912 130 aa-0.17□□□□□ -2.44
PFDN4-202ENST00000441080 PIRTP0C851 137 aa-0.17□□□□□ -2.44
PFDN4-202ENST00000441080 IAPPP10997 89 aa-0.17□□□□□ -2.44
PFDN4-202ENST00000441080 HTN1P15515 57 aa-0.17□□□□□ -2.44
PFDN4-202ENST00000441080 MAP1BP46821 2468 aaKnown RBP-0.17□□□□□ -2.44
PFDN4-202ENST00000441080 B2MP61769 119 aa-0.17□□□□□ -2.44
PFDN4-202ENST00000441080 BTG2P78543 158 aa-0.17□□□□□ -2.44
PFDN4-202ENST00000441080 MT1XP80297 61 aa-0.17□□□□□ -2.44
PFDN4-202ENST00000441080 SARNPP82979 210 aaKnown RBP-0.17□□□□□ -2.44
PFDN4-202ENST00000441080 DOCK1Q14185 1865 aa-0.17□□□□□ -2.44
PFDN4-202ENST00000441080 CCDC58Q4VC31 144 aa-0.17□□□□□ -2.44
PFDN4-202ENST00000441080 CLLU1Q5K131 121 aa-0.17□□□□□ -2.44
PFDN4-202ENST00000441080 LELP1Q5T871 98 aa-0.17□□□□□ -2.44
PFDN4-202ENST00000441080 MYOM3Q5VTT5 1437 aa-0.17□□□□□ -2.44
PFDN4-202ENST00000441080 Q5VV11 94 aa-0.17□□□□□ -2.44
PFDN4-202ENST00000441080 C10orf113Q5VZT2 155 aa-0.17□□□□□ -2.44
PFDN4-202ENST00000441080 OR2T2Q6IF00 324 aa-0.17□□□□□ -2.44
PFDN4-202ENST00000441080 DCHS2Q6V1P9 2916 aa-0.17□□□□□ -2.44
PFDN4-202ENST00000441080 NBEAL2Q6ZNJ1 2754 aa-0.17□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 231 ms