RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 NCOR2Q9Y618 2525 aa2.41□□□□□ -2.02
HMGB3P11-201ENST00000440127 SPTA1P02549 2419 aa2.41□□□□□ -2.02
HMGB3P11-201ENST00000440127 IGLV4-69A0A075B6H9 119 aa2.41□□□□□ -2.02
HMGB3P11-201ENST00000440127 IGHV3-73A0A0B4J1V6 119 aa2.41□□□□□ -2.02
HMGB3P11-201ENST00000440127 A0A1B0GWB2 263 aa2.41□□□□□ -2.02
HMGB3P11-201ENST00000440127 C11orf86A6NJI1 115 aa2.41□□□□□ -2.02
HMGB3P11-201ENST00000440127 H3BUT2 72 aa2.41□□□□□ -2.02
HMGB3P11-201ENST00000440127 K7EP13 123 aa2.41□□□□□ -2.02
HMGB3P11-201ENST00000440127 P0DMU3 169 aa2.41□□□□□ -2.02
HMGB3P11-201ENST00000440127 FAM231AP0DMU4 169 aa2.41□□□□□ -2.02
HMGB3P11-201ENST00000440127 FAM231CP0DMU5 169 aa2.41□□□□□ -2.02
HMGB3P11-201ENST00000440127 HERVK_113P61574 105 aa2.41□□□□□ -2.02
HMGB3P11-201ENST00000440127 RPL39P62891 51 aaKnown RBP2.41□□□□□ -2.02
HMGB3P11-201ENST00000440127 CFAP126Q5VTH2 177 aa2.41□□□□□ -2.02
HMGB3P11-201ENST00000440127 CEND1Q8N111 149 aa2.41□□□□□ -2.02
HMGB3P11-201ENST00000440127 C20orf203Q8NBC4 194 aa2.41□□□□□ -2.02
HMGB3P11-201ENST00000440127 C11orf72Q8NBR9 251 aa2.41□□□□□ -2.02
HMGB3P11-201ENST00000440127 LINC01006Q8NI28 216 aa2.41□□□□□ -2.02
HMGB3P11-201ENST00000440127 ZNF418Q8TF45 676 aaPredicted RBP2.41□□□□□ -2.02
HMGB3P11-201ENST00000440127 DEFB104AQ8WTQ1 72 aa2.41□□□□□ -2.02
HMGB3P11-201ENST00000440127 RAB37Q96AX2 223 aa2.41□□□□□ -2.02
HMGB3P11-201ENST00000440127 HIST1H4GQ99525 98 aa2.41□□□□□ -2.02
HMGB3P11-201ENST00000440127 PRADC1Q9BSG0 188 aa2.41□□□□□ -2.02
HMGB3P11-201ENST00000440127 CHCHD5Q9BSY4 110 aa2.41□□□□□ -2.02
HMGB3P11-201ENST00000440127 ABCA2Q9BZC7 2435 aa2.41□□□□□ -2.02
HMGB3P11-201ENST00000440127 TPRP12270 2363 aaKnown RBP2.41□□□□□ -2.02
HMGB3P11-201ENST00000440127 ABCA1O95477 2261 aa2.4□□□□□ -2.02
HMGB3P11-201ENST00000440127 TRBV7-3A0A075B6L6 115 aa2.4□□□□□ -2.03
HMGB3P11-201ENST00000440127 A0A1W2PPM0 123 aa2.4□□□□□ -2.03
HMGB3P11-201ENST00000440127 ZNF815PA8K554 130 aa2.4□□□□□ -2.03
HMGB3P11-201ENST00000440127 K7EP34 96 aa2.4□□□□□ -2.03
HMGB3P11-201ENST00000440127 IGHV3-53P01767 116 aa2.4□□□□□ -2.03
HMGB3P11-201ENST00000440127 PRM2P04554 102 aa2.4□□□□□ -2.03
HMGB3P11-201ENST00000440127 FABP2P12104 132 aa2.4□□□□□ -2.03
HMGB3P11-201ENST00000440127 CRYBA4P53673 196 aa2.4□□□□□ -2.03
HMGB3P11-201ENST00000440127 FXYD2P54710 66 aa2.4□□□□□ -2.03
HMGB3P11-201ENST00000440127 TMEM170BQ5T4T1 132 aa2.4□□□□□ -2.03
HMGB3P11-201ENST00000440127 C1orf158Q8N1D5 194 aa2.4□□□□□ -2.03
HMGB3P11-201ENST00000440127 CSNK1G2-AS1Q8NCQ2 148 aa2.4□□□□□ -2.03
HMGB3P11-201ENST00000440127 XCL2Q9UBD3 114 aa2.4□□□□□ -2.03
HMGB3P11-201ENST00000440127 DMXL2Q8TDJ6 3036 aa2.4□□□□□ -2.03
HMGB3P11-201ENST00000440127 PKD1L2Q7Z442 2459 aa2.4□□□□□ -2.03
HMGB3P11-201ENST00000440127 BSNQ9UPA5 3926 aa2.39□□□□□ -2.03
HMGB3P11-201ENST00000440127 CACNA1AO00555 2505 aa2.39□□□□□ -2.03
HMGB3P11-201ENST00000440127 DOPEY1Q5JWR5 2465 aa2.39□□□□□ -2.03
HMGB3P11-201ENST00000440127 A0A0J9YXV3 536 aa2.39□□□□□ -2.03
HMGB3P11-201ENST00000440127 TMEM223A0PJW6 202 aa2.39□□□□□ -2.03
HMGB3P11-201ENST00000440127 IGLL5B9A064 214 aa2.39□□□□□ -2.03
HMGB3P11-201ENST00000440127 J3QQQ9 107 aa2.39□□□□□ -2.03
HMGB3P11-201ENST00000440127 K7ERJ3 54 aa2.39□□□□□ -2.03
HMGB3P11-201ENST00000440127 LEPROTO15243 131 aa2.39□□□□□ -2.03
HMGB3P11-201ENST00000440127 IGLV1-51P01701 117 aa2.39□□□□□ -2.03
HMGB3P11-201ENST00000440127 LGALS3P17931 250 aaKnown RBP2.39□□□□□ -2.03
HMGB3P11-201ENST00000440127 EMP1P54849 157 aa2.39□□□□□ -2.03
HMGB3P11-201ENST00000440127 MRPL23Q16540 153 aaKnown RBP2.39□□□□□ -2.03
HMGB3P11-201ENST00000440127 C12orf74Q32Q52 190 aa2.39□□□□□ -2.03
HMGB3P11-201ENST00000440127 KRTAP13-3Q3SY46 172 aa2.39□□□□□ -2.03
HMGB3P11-201ENST00000440127 SCGB1D4Q6XE38 83 aa2.39□□□□□ -2.03
HMGB3P11-201ENST00000440127 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.39□□□□□ -2.03
HMGB3P11-201ENST00000440127 OR5A1Q8NGJ0 315 aa2.39□□□□□ -2.03
HMGB3P11-201ENST00000440127 ZNRF2Q8NHG8 242 aa2.39□□□□□ -2.03
HMGB3P11-201ENST00000440127 PLEKHB2Q96CS7 222 aa2.39□□□□□ -2.03
HMGB3P11-201ENST00000440127 AMELXQ99217 191 aa2.39□□□□□ -2.03
HMGB3P11-201ENST00000440127 NAA38Q9BRA0 125 aaKnown RBP2.39□□□□□ -2.03
HMGB3P11-201ENST00000440127 SPANXB1Q9NS25 103 aaPredicted RBP2.39□□□□□ -2.03
HMGB3P11-201ENST00000440127 SPANXA1Q9NS26 97 aa2.39□□□□□ -2.03
HMGB3P11-201ENST00000440127 MRPL16Q9NX20 251 aaKnown RBP2.39□□□□□ -2.03
HMGB3P11-201ENST00000440127 NHP2Q9NX24 153 aaKnown RBP2.39□□□□□ -2.03
HMGB3P11-201ENST00000440127 CBY1Q9Y3M2 126 aa2.39□□□□□ -2.03
HMGB3P11-201ENST00000440127 SPCS1Q9Y6A9 102 aa2.39□□□□□ -2.03
HMGB3P11-201ENST00000440127 NBEAQ8NFP9 2946 aa2.39□□□□□ -2.03
HMGB3P11-201ENST00000440127 ASPMQ8IZT6 3477 aa2.39□□□□□ -2.03
HMGB3P11-201ENST00000440127 SPTBN4Q9H254 2564 aa2.39□□□□□ -2.03
HMGB3P11-201ENST00000440127 ITPR1Q14643 2758 aa2.38□□□□□ -2.03
HMGB3P11-201ENST00000440127 ATMQ13315 3056 aa2.38□□□□□ -2.03
HMGB3P11-201ENST00000440127 MED13LQ71F56 2210 aa2.38□□□□□ -2.03
HMGB3P11-201ENST00000440127 NBASA2RRP1 2371 aa2.38□□□□□ -2.03
HMGB3P11-201ENST00000440127 PIEZO1Q92508 2521 aa2.38□□□□□ -2.03
HMGB3P11-201ENST00000440127 WNK2Q9Y3S1 2297 aa2.38□□□□□ -2.03
HMGB3P11-201ENST00000440127 TRGV1A0A0A0MS02 117 aa2.38□□□□□ -2.03
HMGB3P11-201ENST00000440127 TRAV4A0A0B4J268 109 aa2.38□□□□□ -2.03
HMGB3P11-201ENST00000440127 A0A0J9YY99 117 aa2.38□□□□□ -2.03
HMGB3P11-201ENST00000440127 TRBV10-1A0A0K0K1A3 114 aa2.38□□□□□ -2.03
HMGB3P11-201ENST00000440127 TSPAN13O95857 204 aa2.38□□□□□ -2.03
HMGB3P11-201ENST00000440127 LY6G6DO95868 133 aa2.38□□□□□ -2.03
HMGB3P11-201ENST00000440127 ZNF22P17026 224 aaPredicted RBP2.38□□□□□ -2.03
HMGB3P11-201ENST00000440127 CR1P17927 2039 aa2.38□□□□□ -2.03
HMGB3P11-201ENST00000440127 MRPS36P82909 103 aaKnown RBP2.38□□□□□ -2.03
HMGB3P11-201ENST00000440127 COTL1Q14019 142 aa2.38□□□□□ -2.03
HMGB3P11-201ENST00000440127 SLC25A29Q8N8R3 303 aa2.38□□□□□ -2.03
HMGB3P11-201ENST00000440127 TMEM263Q8WUH6 116 aaKnown RBP2.38□□□□□ -2.03
HMGB3P11-201ENST00000440127 CHCHD7Q9BUK0 85 aa2.38□□□□□ -2.03
HMGB3P11-201ENST00000440127 UBE2D4Q9Y2X8 147 aa2.38□□□□□ -2.03
HMGB3P11-201ENST00000440127 BOD1L1Q8NFC6 3051 aa2.38□□□□□ -2.03
HMGB3P11-201ENST00000440127 KALRNO60229 2985 aa2.37□□□□□ -2.03
HMGB3P11-201ENST00000440127 PRRC2AP48634 2157 aaKnown RBP2.37□□□□□ -2.03
HMGB3P11-201ENST00000440127 SPTBN1Q01082 2364 aaKnown RBP2.37□□□□□ -2.03
HMGB3P11-201ENST00000440127 CHD8Q9HCK8 2581 aa2.37□□□□□ -2.03
HMGB3P11-201ENST00000440127 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.37□□□□□ -2.03
HMGB3P11-201ENST00000440127 IGHV1-58A0A0C4DH39 117 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms